jgi.p|Nanoce1779_2|539293, mRNA_3460 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|539293
Unique Name	mRNA_3460
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5177
Alignment location	scaffold_6:378780..383956 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	539379
Track	FilteredModels2
ProteinId	539293

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_6	supercontig	scaffold_6:378780..383956 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|539293	gene_3460	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|539293	mRNA_3460-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3460	CDS_3460	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_6:378780..383956-
coding sequence from alignment at scaffold_6:378780..383956-

mRNA sequence

>mRNA_3460 ID=mRNA_3460|Name=jgi.p|Nanoce1779_2|539293|organism=Nannochloropsis oceanica|type=mRNA|length=5177bp
ATGCAGGAGCTGAGTCCATTTCTGGAGGAGGTCGAGAGGAGGGGGTGGGT
TGGAGGGAGGCATGTTGCGACTGCCGTTGTTGCTTCTGCTTCTGACTTAT
CCTTATCTTCATCGTCACATATACGTGAAGAAGGAGGAGGAGGAGAAGGA
GAAGGAGGGAAAAGGGCGGGGATGCAAAGATCTTCTCCTTCTCCGGCCAT
GTCAGTACATTCGACAGTTGCGGTGGAGTTGCTGCACCGAAGAAAAGGTG
GGGGATGGCAAGACGCTTTGCGTGTTTTAAAACGACTCGAACGCGTGGCC
GACGAACTAGGGGATAGAGAGATTGTTCGGAATGCGGCACCGACGTATGA
GAGGATCATGAACGCCGCAACCAAGGCAGGGGATCTCGAAGCAGCGACCC
TGATTTTGAGCATGTTGCAGGCGCGGGAGGTGCCCGTGTCAAGCATGGGC
TACAACTCGATCTTATACGGCTGTGCTCAGACAGGCCAGCTCGCCCGTGC
GAGGAAAATCTTTCAAGAAATGCTTGCCGCCCCTGCAACTGCTTCTGCTG
CTACTGGCAAAGGTGTCCTCCCTCCTTTGCCGACATTAATCAACTACAAC
ACTATGTTGCTCGTTCTGGCAAAACAAGGTGAATTTTCAGAAGCTAAGGC
CCTCCTTGCTGAAATGCGATCACCTCAAGCACCAGCACCTGACATTGTTT
CGTTTAATACTGTGTTAGCAGCAGGGGCGGCCAGCGGAGACTATGAAGGA
GTCTGCGAGTTTTTCCAAAAGGAGATGAAGGGGGACGGAAGGAGGGAGGA
TAGGAGGGTGCGTCCTGACATAGTAAGCTATAATACGTTGTTATCAGCAT
TACAGAAATGGAAAGGCGGTGGAAGATCGCGTGCCAGTGGGGGAGGAGAG
GAAGGGAGGATGATTAGCGACAGCTCCGAGAAAGCGAGTGCGTGGACACG
GGGCTTAGCCGTGTTACACGAGCTTCAGTCAACTCCTGGGGTAGCTCCGG
ACCTTCAAACGTTCAATACTCTCATGGATATTGGCTGTAAGTTCGGTCAT
ATCGACGAGGCCCGTTCTATCATCCTATCCACCATGCACGCGGCCAATCA
AACTCCTGATCGAGTGACATACAATATCCTTGCCATGGGGTTTGTGCGGG
CAAAGCGATATGAAGAAGCAATAGAAGTCGTCGAAGAGGGAAAGCAGGTA
TCCTGGGATGCGCTTACATACTGGGTGATGTTTGAGGCCCTGGCAGGCTT
GAGGAGGGATAAAGAGCTGGATGCACTCTTTTGGAAGAGGCACAAGAAGA
TCCGCGAAGGAGGAGCGGTGGATAATCAACAACGACGAGGCGGCAGGAGT
ATTACTCGTGGAAGTCGAGGGAGAAGGACGGTGAAGGATGAAAGCAGGGA
TGATCAGGCATTGGAAGAGTTGTTGTGTGGGATGATCCACGCGGGGCGCC
TTGAGGACGGCCTGTGCTTAGTCACGGCACTTGAAAAGGAGATCATCAAG
AAGCAAGCGGGAAAGAACGGGGGGGTTCTTCAGTTGACGCCTGCGGCTTT
CCACCAATGCTTGCAAGCGTGCAAAGCTAACGGGAATCTAGAGGGAGCCC
TTTTGCTGCTGCGAGAGATGCAGCGGCGTGGCTTACCATTAGGAATCGCT
GCGTATGACACTGTAGTTCGCATATGTAGTACCCAGCATGCCTGGAAGAA
GGGGCTAGAGTTGCTTGATCACCTGCGAGCTGAGCCTGCATTGGCCCGTC
AGATGACCCGCGAACTGCACAATACACGCGTGAGCTTCTTTGCGCAATTG
AAGGACCTGAAAGGGTGTCGTCATGCCTTGGAGGAGATGCGAGCAGATGG
GCATGTACCGGATGGGAAGAGCTATGCGTGGGCCCTGCATGGGGAGGCGG
GAACCGGAACGAGGAATGAAGCGGGAGTTGGCGAGTTGCTGGATAAGGCC
AGGGAGGAGGGATGGGAGTTGACAGAAGAGATGCTCTTGGCGCACACGAC
AGCGTTGAAACGAAGCGGGGATTGGTGGGGGGGGATGCAGGTGCTGGAGC
GGGTGGCCGCTGACCGGAAGAAGCAGCTGGAGCAGCAGGGCAAGCAAGGG
GGTGGTGATGGTGTTTTAAATATCACATCGCATATTATCAATAATGTCTT
GTCGGCTTTGGCACAAGATAAGCAATGGTCACGCATCCTCGCCCTCCAAG
CAAGCATGTACGAAGCTTACGGCGCTACTCCGGATAATGTCACATATCTC
TACCAAATTATGGCATTAGCGCAATCAGGAAAAGGAGACGAAGCCCTCTC
GCTTTTCCAGCAAATACGAGCAGGGGCTTTCGGACCTGATGTCTTCGCTC
AAGACCCTATGTACACAGCCCTCCTCTCTAACTCGGGCGTTGCCCTAGAC
GGGAGCGCGGAAACGATCGACAAGCTGTTGCTCATGCGGGAAGAGGACGG
GTTGCCTGTCACGCCGCATTTCGTGCACAGTCTCATTTCAACCTATGGAA
AGTCCGGTCATCTTGCTAAAGCCATTGCTGTGTTTGAATCCATTCCCACG
TATCTCAACGGACAGCCTCCAGACCTCGTGGCGTTCAATGCTTTAATTAT
GGCTCATCGTTTGGCGGGCACCCCGTTGGAAATCGGCGGTCTTCCTCTGT
ACCGACAATTGTTAATCTCGTCTGCTGCTACTACTGCAGACCCGACTACT
ACTGCTGCTGCAGATGTTTCGACGACAGTGCCAGATGGATGGACCTACAC
ACCTTTAATTGCCTCGTGTGAATCAGAGGGGCTCTGGCCGGTCGCCATGT
ACTTATATGATGAATCAGCCTTCACCATGCATGTCACAACGTGGGGTTCT
TCTCCGCTTTCCCCAGTTGAAGCTGCCGCTGCTGGTGGTGGTGGTGGTGG
GGGTAGTGGGGGTGCTGCTCCTCCTTTTGGGAGGATGGAAAAGGAAAGGA
GAGAGAAGCTGCAGGGAGGTAAGAATAACGCTTCACTTACAATGGAAGTC
CCACCAAGCGCTTTGGACAACCTTGTGGACACAGAGACAGGTAGCAGCAA
CAGCAGTAGGAGCAGCAGGGCCAGAGGCACCCGTTTTGAGATTCTCAAAA
CCCTCATCGCCAGCCTGGATCGTCTCGGCGTCGATTTGTTTGTGCAAGAC
CTCTACAAAGATGGTTACAACCACGGAATTTTCAACCATTGGCTCCACAA
AGACGGACGTGGTCGCGTGATGGACTTCCACCACTTTTCTCGCCCTTTGG
CAAAGGCCGCGATAAATCACGCCCTTGAGGAGTTCGAGGCGGACCAGCTA
GAGCAACGCAAGCTGCCCTGGGGAAAGAGAAGAAAGAGAGACTCACCCTG
GGTGATGATTGTCGGGCAAGGAATGAGGCGGCGGGGGGGGAGGGGGGTGC
TGAAGCAGGAGGTGGTGCGGCTGCTGATGGAACTGGACCCACCATTGCAC
GCGGAGGTGCAGGCGAACAACTTGGGGAGGTTGGTGGTGGCGGGAAAGAA
AATCAAGGATTACACGACAGCGAGGATAGAGAGGAGAGGAGGGAGGGTGA
GAAGGAGGGAGCCTGTTGGGACGAGGGATGGGAAAGAGGGGTTGGCGATG
CGGGGGTGGAGGGAAAGGGGATAGATATGAAGCTATGTGGTATAGAGACT
TCTGCTTGTATAGAAACTTTCGATGACAAAGCAGAAAGCAAATATAGGAA
ATGCAACAACAAATATTGATATGTCTCTAGGTCTCATCCTCCATATCTTC
CCCCCCTTCATCTCTTATTTTGGTTGCGCTTTTTCCTGTACCGCGAGGAT
ACGAGTGTCATCAGACCACCTGGCTTTTTTTCAGTAGTAGTGTTGTTGTT
TTATTGTTGTTTCTGGTGTTGATATATATATGGTGGAGATGTCAACACAA
CGAGTCACTATCTTTCAGCGACGACGAAAACTCCCACTCTGCCTTTCCTC
CGCTCGCCCTCCGTCCACCCTTCCCTTACCATCCTGCTTTCAATCTTTAT
TCACCTCCTCGCCTGCAGCTGATGCCACCCCCCCCCAAAAAGCGTTATTC
AAAACGTTTCGAAAGTTTTTTTCTCCTCATTCCCCTTTCGTCCTCTTTCA
CTTCCTCTTCTCCCTCGCTTTGTCCTTTTAAAGAGGCCTCGAAGCTGTCT
GGATGATAGAAAAGATAGCTGAACCCACCACCACAAAGATAAAGAAGCCA
AGGAGCAATGGACTCACGGGGGCGGCCTCCTCGCGTTTCTATGTTGTTTG
TGAAATAAAAGCGATAAATGAGGGGTAGTTGTGAAGCGAATGAATAGAGC
CAGAATACAAGAAAATAAATATGATCCAGAACCAGAGGACATTCAAGGTA
TGGCGAGGTGTAGGACATGAACATTTGATAGAAGTTCAATGAGCCAGTCC
GTAGACGCGGAGGGTATCAGACGATGACAACAAACATGATGAATAACTGG
TGATGCGTGAACGGGCAAGTTATGTCAGCACCATACTCCACGTCTACCTG
ACCCGTCCACTATATTCAACACTCGACAAGACGTACCGCGGCCTTTCCCA
CGGGTACATTCCCTCTCTTGGTCACGTTTTTGTCAAATTTCTCGGAGCGG
AGACGGGTCGCGCGGCTGGTGGCCTGTTGTTGTCGGTAGGAAGAGTATGG
TGGCAGAGTGATGAGCATCGTTTTGCGTCGTGTGGCAGGCAGATCGAGTA
GGCAAGAGCGCAGGACTTTGAAAGGGAAAGCCTAGCGAATGCCAAAGACA
CACAAGTAAACACAAGGCACATACCATGATTGAAAACGGAGAAGTAAAGG
GGCTTCCTGTCGGCGTGTGTGTGGAATTGAGATGGAGCGAGTTAGAAATG
GGTTGCCAAAGGAGCTTCATCATCAATTGATGGGCTCATTGGTGGATGCT
CTTGGTTTGCTTGCACAACAAGCATGCGAGGTGAGCTTTCGGCAATCCGC
ATCACATACGCAATAAGGTACAGCAAGCTGTCGTGCATTGATACCACGAA
GCATTTAGCTCAGTCCAAGCCCTCAATGATTGAAGAGCATTCATTTTAAG
TAGAGCCGCCACTTACTTGAGGCGATTTCAAATTCCCTCAGTGACGTTGC
TTTTCGCCCAGGCCACCGGCGTCCCTTTCTGCTGTGGTAACTTACTCTCC
GCCCCGGATTTTGATGTGGAAATGCCT

protein sequence of jgi.p|Nanoce1779_2|539293

>mRNA_3460-protein ID=mRNA_3460-protein|Name=jgi.p|Nanoce1779_2|539293|organism=Nannochloropsis oceanica|type=polypeptide|length=1208bp
MQELSPFLEEVERRGWVGGRHVATAVVASASDLSLSSSSHIREEGGGGEG
EGGKRAGMQRSSPSPAMSVHSTVAVELLHRRKGGGWQDALRVLKRLERVA
DELGDREIVRNAAPTYERIMNAATKAGDLEAATLILSMLQAREVPVSSMG
YNSILYGCAQTGQLARARKIFQEMLAAPATASAATGKGVLPPLPTLINYN
TMLLVLAKQGEFSEAKALLAEMRSPQAPAPDIVSFNTVLAAGAASGDYEG
VCEFFQKEMKGDGRREDRRVRPDIVSYNTLLSALQKWKGGGRSRASGGGE
EGRMISDSSEKASAWTRGLAVLHELQSTPGVAPDLQTFNTLMDIGCKFGH
IDEARSIILSTMHAANQTPDRVTYNILAMGFVRAKRYEEAIEVVEEGKQV
SWDALTYWVMFEALAGLRRDKELDALFWKRHKKIREGGAVDNQQRRGGRS
ITRGSRGRRTVKDESRDDQALEELLCGMIHAGRLEDGLCLVTALEKEIIK
KQAGKNGGVLQLTPAAFHQCLQACKANGNLEGALLLLREMQRRGLPLGIA
AYDTVVRICSTQHAWKKGLELLDHLRAEPALARQMTRELHNTRVSFFAQL
KDLKGCRHALEEMRADGHVPDGKSYAWALHGEAGTGTRNEAGVGELLDKA
REEGWELTEEMLLAHTTALKRSGDWWGGMQVLERVAADRKKQLEQQGKQG
GGDGVLNITSHIINNVLSALAQDKQWSRILALQASMYEAYGATPDNVTYL
YQIMALAQSGKGDEALSLFQQIRAGAFGPDVFAQDPMYTALLSNSGVALD
GSAETIDKLLLMREEDGLPVTPHFVHSLISTYGKSGHLAKAIAVFESIPT
YLNGQPPDLVAFNALIMAHRLAGTPLEIGGLPLYRQLLISSAATTADPTT
TAAADVSTTVPDGWTYTPLIASCESEGLWPVAMYLYDESAFTMHVTTWGS
SPLSPVEAAAAGGGGGGGSGGAAPPFGRMEKERREKLQGGKNNASLTMEV
PPSALDNLVDTETGSSNSSRSSRARGTRFEILKTLIASLDRLGVDLFVQD
LYKDGYNHGIFNHWLHKDGRGRVMDFHHFSRPLAKAAINHALEEFEADQL
EQRKLPWGKRRKRDSPWVMIVGQGMRRRGGRGVLKQEVVRLLMELDPPLH
AEVQANNLGRLVVAGKKIKDYTTARIERRGGRVRRREPVGTRDGKEGLAM
RGWRERG*

mRNA from alignment at scaffold_6:378780..383956-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3460 ID=mRNA_3460|Name=jgi.p|Nanoce1779_2|539293|organism=Nannochloropsis oceanica|type=mRNA|length=5177bp|location=Sequence derived from alignment at scaffold_6:378780..383956- (Nannochloropsis oceanica)
ATGCAGGAGCTGAGTCCATTTCTGGAGGAGGTCGAGAGGAGGGGGTGGGT
TGGAGGGAGGCATGTTGCGACTGCCGTTGTTGCTTCTGCTTCTGACTTAT
CCTTATCTTCATCGTCACATATACGTGAAGAAGGAGGAGGAGGAGAAGGA
GAAGGAGGGAAAAGGGCGGGGATGCAAAGATCTTCTCCTTCTCCGGCCAT
GTCAGTACATTCGACAGTTGCGGTGGAGTTGCTGCACCGAAGAAAAGGTG
GGGGATGGCAAGACGCTTTGCGTGTTTTAAAACGACTCGAACGCGTGGCC
GACGAACTAGGGGATAGAGAGATTGTTCGGAATGCGGCACCGACGTATGA
GAGGATCATGAACGCCGCAACCAAGGCAGGGGATCTCGAAGCAGCGACCC
TGATTTTGAGCATGTTGCAGGCGCGGGAGGTGCCCGTGTCAAGCATGGGC
TACAACTCGATCTTATACGGCTGTGCTCAGACAGGCCAGCTCGCCCGTGC
GAGGAAAATCTTTCAAGAAATGCTTGCCGCCCCTGCAACTGCTTCTGCTG
CTACTGGCAAAGGTGTCCTCCCTCCTTTGCCGACATTAATCAACTACAAC
ACTATGTTGCTCGTTCTGGCAAAACAAGGTGAATTTTCAGAAGCTAAGGC
CCTCCTTGCTGAAATGCGATCACCTCAAGCACCAGCACCTGACATTGTTT
CGTTTAATACTGTGTTAGCAGCAGGGGCGGCCAGCGGAGACTATGAAGGA
GTCTGCGAGTTTTTCCAAAAGGAGATGAAGGGGGACGGAAGGAGGGAGGA
TAGGAGGGTGCGTCCTGACATAGTAAGCTATAATACGTTGTTATCAGCAT
TACAGAAATGGAAAGGCGGTGGAAGATCGCGTGCCAGTGGGGGAGGAGAG
GAAGGGAGGATGATTAGCGACAGCTCCGAGAAAGCGAGTGCGTGGACACG
GGGCTTAGCCGTGTTACACGAGCTTCAGTCAACTCCTGGGGTAGCTCCGG
ACCTTCAAACGTTCAATACTCTCATGGATATTGGCTGTAAGTTCGGTCAT
ATCGACGAGGCCCGTTCTATCATCCTATCCACCATGCACGCGGCCAATCA
AACTCCTGATCGAGTGACATACAATATCCTTGCCATGGGGTTTGTGCGGG
CAAAGCGATATGAAGAAGCAATAGAAGTCGTCGAAGAGGGAAAGCAGGTA
TCCTGGGATGCGCTTACATACTGGGTGATGTTTGAGGCCCTGGCAGGCTT
GAGGAGGGATAAAGAGCTGGATGCACTCTTTTGGAAGAGGCACAAGAAGA
TCCGCGAAGGAGGAGCGGTGGATAATCAACAACGACGAGGCGGCAGGAGT
ATTACTCGTGGAAGTCGAGGGAGAAGGACGGTGAAGGATGAAAGCAGGGA
TGATCAGGCATTGGAAGAGTTGTTGTGTGGGATGATCCACGCGGGGCGCC
TTGAGGACGGCCTGTGCTTAGTCACGGCACTTGAAAAGGAGATCATCAAG
AAGCAAGCGGGAAAGAACGGGGGGGTTCTTCAGTTGACGCCTGCGGCTTT
CCACCAATGCTTGCAAGCGTGCAAAGCTAACGGGAATCTAGAGGGAGCCC
TTTTGCTGCTGCGAGAGATGCAGCGGCGTGGCTTACCATTAGGAATCGCT
GCGTATGACACTGTAGTTCGCATATGTAGTACCCAGCATGCCTGGAAGAA
GGGGCTAGAGTTGCTTGATCACCTGCGAGCTGAGCCTGCATTGGCCCGTC
AGATGACCCGCGAACTGCACAATACACGCGTGAGCTTCTTTGCGCAATTG
AAGGACCTGAAAGGGTGTCGTCATGCCTTGGAGGAGATGCGAGCAGATGG
GCATGTACCGGATGGGAAGAGCTATGCGTGGGCCCTGCATGGGGAGGCGG
GAACCGGAACGAGGAATGAAGCGGGAGTTGGCGAGTTGCTGGATAAGGCC
AGGGAGGAGGGATGGGAGTTGACAGAAGAGATGCTCTTGGCGCACACGAC
AGCGTTGAAACGAAGCGGGGATTGGTGGGGGGGGATGCAGGTGCTGGAGC
GGGTGGCCGCTGACCGGAAGAAGCAGCTGGAGCAGCAGGGCAAGCAAGGG
GGTGGTGATGGTGTTTTAAATATCACATCGCATATTATCAATAATGTCTT
GTCGGCTTTGGCACAAGATAAGCAATGGTCACGCATCCTCGCCCTCCAAG
CAAGCATGTACGAAGCTTACGGCGCTACTCCGGATAATGTCACATATCTC
TACCAAATTATGGCATTAGCGCAATCAGGAAAAGGAGACGAAGCCCTCTC
GCTTTTCCAGCAAATACGAGCAGGGGCTTTCGGACCTGATGTCTTCGCTC
AAGACCCTATGTACACAGCCCTCCTCTCTAACTCGGGCGTTGCCCTAGAC
GGGAGCGCGGAAACGATCGACAAGCTGTTGCTCATGCGGGAAGAGGACGG
GTTGCCTGTCACGCCGCATTTCGTGCACAGTCTCATTTCAACCTATGGAA
AGTCCGGTCATCTTGCTAAAGCCATTGCTGTGTTTGAATCCATTCCCACG
TATCTCAACGGACAGCCTCCAGACCTCGTGGCGTTCAATGCTTTAATTAT
GGCTCATCGTTTGGCGGGCACCCCGTTGGAAATCGGCGGTCTTCCTCTGT
ACCGACAATTGTTAATCTCGTCTGCTGCTACTACTGCAGACCCGACTACT
ACTGCTGCTGCAGATGTTTCGACGACAGTGCCAGATGGATGGACCTACAC
ACCTTTAATTGCCTCGTGTGAATCAGAGGGGCTCTGGCCGGTCGCCATGT
ACTTATATGATGAATCAGCCTTCACCATGCATGTCACAACGTGGGGTTCT
TCTCCGCTTTCCCCAGTTGAAGCTGCCGCTGCTGGTGGTGGTGGTGGTGG
GGGTAGTGGGGGTGCTGCTCCTCCTTTTGGGAGGATGGAAAAGGAAAGGA
GAGAGAAGCTGCAGGGAGGTAAGAATAACGCTTCACTTACAATGGAAGTC
CCACCAAGCGCTTTGGACAACCTTGTGGACACAGAGACAGGTAGCAGCAA
CAGCAGTAGGAGCAGCAGGGCCAGAGGCACCCGTTTTGAGATTCTCAAAA
CCCTCATCGCCAGCCTGGATCGTCTCGGCGTCGATTTGTTTGTGCAAGAC
CTCTACAAAGATGGTTACAACCACGGAATTTTCAACCATTGGCTCCACAA
AGACGGACGTGGTCGCGTGATGGACTTCCACCACTTTTCTCGCCCTTTGG
CAAAGGCCGCGATAAATCACGCCCTTGAGGAGTTCGAGGCGGACCAGCTA
GAGCAACGCAAGCTGCCCTGGGGAAAGAGAAGAAAGAGAGACTCACCCTG
GGTGATGATTGTCGGGCAAGGAATGAGGCGGCGGGGGGGGAGGGGGGTGC
TGAAGCAGGAGGTGGTGCGGCTGCTGATGGAACTGGACCCACCATTGCAC
GCGGAGGTGCAGGCGAACAACTTGGGGAGGTTGGTGGTGGCGGGAAAGAA
AATCAAGGATTACACGACAGCGAGGATAGAGAGGAGAGGAGGGAGGGTGA
GAAGGAGGGAGCCTGTTGGGACGAGGGATGGGAAAGAGGGGTTGGCGATG
CGGGGGTGGAGGGAAAGGGGATAGATATGAAGCTATGTGGTATAGAGACT
TCTGCTTGTATAGAAACTTTCGATGACAAAGCAGAAAGCAAATATAGGAA
ATGCAACAACAAATATTGATATGTCTCTAGGTCTCATCCTCCATATCTTC
CCCCCCTTCATCTCTTATTTTGGTTGCGCTTTTTCCTGTACCGCGAGGAT
ACGAGTGTCATCAGACCACCTGGCTTTTTTTCAGTAGTAGTGTTGTTGTT
TTATTGTTGTTTCTGGTGTTGATATATATATGGTGGAGATGTCAACACAA
CGAGTCACTATCTTTCAGCGACGACGAAAACTCCCACTCTGCCTTTCCTC
CGCTCGCCCTCCGTCCACCCTTCCCTTACCATCCTGCTTTCAATCTTTAT
TCACCTCCTCGCCTGCAGCTGATGCCACCCCCCCCCAAAAAGCGTTATTC
AAAACGTTTCGAAAGTTTTTTTCTCCTCATTCCCCTTTCGTCCTCTTTCA
CTTCCTCTTCTCCCTCGCTTTGTCCTTTTAAAGAGGCCTCGAAGCTGTCT
GGATGATAGAAAAGATAGCTGAACCCACCACCACAAAGATAAAGAAGCCA
AGGAGCAATGGACTCACGGGGGCGGCCTCCTCGCGTTTCTATGTTGTTTG
TGAAATAAAAGCGATAAATGAGGGGTAGTTGTGAAGCGAATGAATAGAGC
CAGAATACAAGAAAATAAATATGATCCAGAACCAGAGGACATTCAAGGTA
TGGCGAGGTGTAGGACATGAACATTTGATAGAAGTTCAATGAGCCAGTCC
GTAGACGCGGAGGGTATCAGACGATGACAACAAACATGATGAATAACTGG
TGATGCGTGAACGGGCAAGTTATGTCAGCACCATACTCCACGTCTACCTG
ACCCGTCCACTATATTCAACACTCGACAAGACGTACCGCGGCCTTTCCCA
CGGGTACATTCCCTCTCTTGGTCACGTTTTTGTCAAATTTCTCGGAGCGG
AGACGGGTCGCGCGGCTGGTGGCCTGTTGTTGTCGGTAGGAAGAGTATGG
TGGCAGAGTGATGAGCATCGTTTTGCGTCGTGTGGCAGGCAGATCGAGTA
GGCAAGAGCGCAGGACTTTGAAAGGGAAAGCCTAGCGAATGCCAAAGACA
CACAAGTAAACACAAGGCACATACCATGATTGAAAACGGAGAAGTAAAGG
GGCTTCCTGTCGGCGTGTGTGTGGAATTGAGATGGAGCGAGTTAGAAATG
GGTTGCCAAAGGAGCTTCATCATCAATTGATGGGCTCATTGGTGGATGCT
CTTGGTTTGCTTGCACAACAAGCATGCGAGGTGAGCTTTCGGCAATCCGC
ATCACATACGCAATAAGGTACAGCAAGCTGTCGTGCATTGATACCACGAA
GCATTTAGCTCAGTCCAAGCCCTCAATGATTGAAGAGCATTCATTTTAAG
TAGAGCCGCCACTTACTTGAGGCGATTTCAAATTCCCTCAGTGACGTTGC
TTTTCGCCCAGGCCACCGGCGTCCCTTTCTGCTGTGGTAACTTACTCTCC
GCCCCGGATTTTGATGTGGAAATGCCT

Coding sequence (CDS) from alignment at scaffold_6:378780..383956-

>mRNA_3460 ID=mRNA_3460|Name=jgi.p|Nanoce1779_2|539293|organism=Nannochloropsis oceanica|type=CDS|length=3624bp|location=Sequence derived from alignment at scaffold_6:378780..383956- (Nannochloropsis oceanica)
ATGCAGGAGCTGAGTCCATTTCTGGAGGAGGTCGAGAGGAGGGGGTGGGT
TGGAGGGAGGCATGTTGCGACTGCCGTTGTTGCTTCTGCTTCTGACTTAT
CCTTATCTTCATCGTCACATATACGTGAAGAAGGAGGAGGAGGAGAAGGA
GAAGGAGGGAAAAGGGCGGGGATGCAAAGATCTTCTCCTTCTCCGGCCAT
GTCAGTACATTCGACAGTTGCGGTGGAGTTGCTGCACCGAAGAAAAGGTG
GGGGATGGCAAGACGCTTTGCGTGTTTTAAAACGACTCGAACGCGTGGCC
GACGAACTAGGGGATAGAGAGATTGTTCGGAATGCGGCACCGACGTATGA
GAGGATCATGAACGCCGCAACCAAGGCAGGGGATCTCGAAGCAGCGACCC
TGATTTTGAGCATGTTGCAGGCGCGGGAGGTGCCCGTGTCAAGCATGGGC
TACAACTCGATCTTATACGGCTGTGCTCAGACAGGCCAGCTCGCCCGTGC
GAGGAAAATCTTTCAAGAAATGCTTGCCGCCCCTGCAACTGCTTCTGCTG
CTACTGGCAAAGGTGTCCTCCCTCCTTTGCCGACATTAATCAACTACAAC
ACTATGTTGCTCGTTCTGGCAAAACAAGGTGAATTTTCAGAAGCTAAGGC
CCTCCTTGCTGAAATGCGATCACCTCAAGCACCAGCACCTGACATTGTTT
CGTTTAATACTGTGTTAGCAGCAGGGGCGGCCAGCGGAGACTATGAAGGA
GTCTGCGAGTTTTTCCAAAAGGAGATGAAGGGGGACGGAAGGAGGGAGGA
TAGGAGGGTGCGTCCTGACATAGTAAGCTATAATACGTTGTTATCAGCAT
TACAGAAATGGAAAGGCGGTGGAAGATCGCGTGCCAGTGGGGGAGGAGAG
GAAGGGAGGATGATTAGCGACAGCTCCGAGAAAGCGAGTGCGTGGACACG
GGGCTTAGCCGTGTTACACGAGCTTCAGTCAACTCCTGGGGTAGCTCCGG
ACCTTCAAACGTTCAATACTCTCATGGATATTGGCTGTAAGTTCGGTCAT
ATCGACGAGGCCCGTTCTATCATCCTATCCACCATGCACGCGGCCAATCA
AACTCCTGATCGAGTGACATACAATATCCTTGCCATGGGGTTTGTGCGGG
CAAAGCGATATGAAGAAGCAATAGAAGTCGTCGAAGAGGGAAAGCAGGTA
TCCTGGGATGCGCTTACATACTGGGTGATGTTTGAGGCCCTGGCAGGCTT
GAGGAGGGATAAAGAGCTGGATGCACTCTTTTGGAAGAGGCACAAGAAGA
TCCGCGAAGGAGGAGCGGTGGATAATCAACAACGACGAGGCGGCAGGAGT
ATTACTCGTGGAAGTCGAGGGAGAAGGACGGTGAAGGATGAAAGCAGGGA
TGATCAGGCATTGGAAGAGTTGTTGTGTGGGATGATCCACGCGGGGCGCC
TTGAGGACGGCCTGTGCTTAGTCACGGCACTTGAAAAGGAGATCATCAAG
AAGCAAGCGGGAAAGAACGGGGGGGTTCTTCAGTTGACGCCTGCGGCTTT
CCACCAATGCTTGCAAGCGTGCAAAGCTAACGGGAATCTAGAGGGAGCCC
TTTTGCTGCTGCGAGAGATGCAGCGGCGTGGCTTACCATTAGGAATCGCT
GCGTATGACACTGTAGTTCGCATATGTAGTACCCAGCATGCCTGGAAGAA
GGGGCTAGAGTTGCTTGATCACCTGCGAGCTGAGCCTGCATTGGCCCGTC
AGATGACCCGCGAACTGCACAATACACGCGTGAGCTTCTTTGCGCAATTG
AAGGACCTGAAAGGGTGTCGTCATGCCTTGGAGGAGATGCGAGCAGATGG
GCATGTACCGGATGGGAAGAGCTATGCGTGGGCCCTGCATGGGGAGGCGG
GAACCGGAACGAGGAATGAAGCGGGAGTTGGCGAGTTGCTGGATAAGGCC
AGGGAGGAGGGATGGGAGTTGACAGAAGAGATGCTCTTGGCGCACACGAC
AGCGTTGAAACGAAGCGGGGATTGGTGGGGGGGGATGCAGGTGCTGGAGC
GGGTGGCCGCTGACCGGAAGAAGCAGCTGGAGCAGCAGGGCAAGCAAGGG
GGTGGTGATGGTGTTTTAAATATCACATCGCATATTATCAATAATGTCTT
GTCGGCTTTGGCACAAGATAAGCAATGGTCACGCATCCTCGCCCTCCAAG
CAAGCATGTACGAAGCTTACGGCGCTACTCCGGATAATGTCACATATCTC
TACCAAATTATGGCATTAGCGCAATCAGGAAAAGGAGACGAAGCCCTCTC
GCTTTTCCAGCAAATACGAGCAGGGGCTTTCGGACCTGATGTCTTCGCTC
AAGACCCTATGTACACAGCCCTCCTCTCTAACTCGGGCGTTGCCCTAGAC
GGGAGCGCGGAAACGATCGACAAGCTGTTGCTCATGCGGGAAGAGGACGG
GTTGCCTGTCACGCCGCATTTCGTGCACAGTCTCATTTCAACCTATGGAA
AGTCCGGTCATCTTGCTAAAGCCATTGCTGTGTTTGAATCCATTCCCACG
TATCTCAACGGACAGCCTCCAGACCTCGTGGCGTTCAATGCTTTAATTAT
GGCTCATCGTTTGGCGGGCACCCCGTTGGAAATCGGCGGTCTTCCTCTGT
ACCGACAATTGTTAATCTCGTCTGCTGCTACTACTGCAGACCCGACTACT
ACTGCTGCTGCAGATGTTTCGACGACAGTGCCAGATGGATGGACCTACAC
ACCTTTAATTGCCTCGTGTGAATCAGAGGGGCTCTGGCCGGTCGCCATGT
ACTTATATGATGAATCAGCCTTCACCATGCATGTCACAACGTGGGGTTCT
TCTCCGCTTTCCCCAGTTGAAGCTGCCGCTGCTGGTGGTGGTGGTGGTGG
GGGTAGTGGGGGTGCTGCTCCTCCTTTTGGGAGGATGGAAAAGGAAAGGA
GAGAGAAGCTGCAGGGAGGTAAGAATAACGCTTCACTTACAATGGAAGTC
CCACCAAGCGCTTTGGACAACCTTGTGGACACAGAGACAGGTAGCAGCAA
CAGCAGTAGGAGCAGCAGGGCCAGAGGCACCCGTTTTGAGATTCTCAAAA
CCCTCATCGCCAGCCTGGATCGTCTCGGCGTCGATTTGTTTGTGCAAGAC
CTCTACAAAGATGGTTACAACCACGGAATTTTCAACCATTGGCTCCACAA
AGACGGACGTGGTCGCGTGATGGACTTCCACCACTTTTCTCGCCCTTTGG
CAAAGGCCGCGATAAATCACGCCCTTGAGGAGTTCGAGGCGGACCAGCTA
GAGCAACGCAAGCTGCCCTGGGGAAAGAGAAGAAAGAGAGACTCACCCTG
GGTGATGATTGTCGGGCAAGGAATGAGGCGGCGGGGGGGGAGGGGGGTGC
TGAAGCAGGAGGTGGTGCGGCTGCTGATGGAACTGGACCCACCATTGCAC
GCGGAGGTGCAGGCGAACAACTTGGGGAGGTTGGTGGTGGCGGGAAAGAA
AATCAAGGATTACACGACAGCGAGGATAGAGAGGAGAGGAGGGAGGGTGA
GAAGGAGGGAGCCTGTTGGGACGAGGGATGGGAAAGAGGGGTTGGCGATG
CGGGGGTGGAGGGAAAGGGGATAG

Synonyms

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