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Properties
| Property Name | Value |
|---|
| TranscriptId | 582069 |
| Track | FilteredModels2 |
| ProteinId | 581983 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:207947..209764 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3395 ID=mRNA_3395|Name=jgi.p|Nanoce1779_2|581983|organism=Nannochloropsis oceanica|type=mRNA|length=1300bp
GGGGGGGGGGGGACGAGGGGGAGGAGGAGCGGGAGGAGGAACGGGAGGGG
TCACATCCGTTGGTAATAATAGTAGTAACAGTACAAGGGTGAACAGGGAT
GGAGGGGGGCTGGAAGGAGGGATGGGAGGAGGGGCCGAAGCGACGGCGGG
CGTGGGGAGGATGTCCATGTCGTCGTTGGGAGTAATTGATGAATGCCGGA
GCTTCCCGGGGGTACTGGCGTGCTTGGACGTGCGGTTAATCGCCTGGGAT
GTTGTGCCATCGCAGCTGTTCACGTTTTTGGGGCTGGTGTTTTTTAGTCT
TATCCACATCCCAGTCAATGTGCCCGCGCTTGCGGCCACTACAGGCACAG
ACGTGGATTTGAACAAGGAGCTCAAGGCCCACGGGGTGTCCAATCTGTTG
TGTGGCCTCTTCGGGGGCCTGCAGACGTACATGGCCTACTCCACCAGCGC
TCTGTACTTCAAAACCGGCGGTGGGTATCGCCCATGCCTCTTCCTCATCG
CGGCACTGATGGCCGCCTTCCTCCTTCTGGGGCAAGAGGCAATCACCTAT
TTCCCTCGACCTCTCGCGGGATGCCTCCTCCTCCACCTCGGAGCGGTGCT
GCTGTACGAGAGTCTGGTATTGACGTGGCAGAAGGCGGTGGACATGAGTG
AATACGTCACAATCTGGACCATCACGCTGAGTATGACTATCATCGGCTTC
ATGGAAGGTGTGGGCATTGGCCTCCTCCTCGCGTGTGGAATCTTCGTCGT
ACAGTGTTCGCGCAATAATCCCATCGGGAGTGCCTTCCCAGGAGACGGGC
TCTCCAGCAAGGAAATGCGGTCGCCAGCTCAGAGGAAGCTCCTCGCTTAC
CGTTTGCAGGGCTCCATTTACATCATTCGACTGCGAGGTACCGACGGAAG
GAGGGAGGGAAGGAGGGAAGGAGAGCTGCTAGGGGATGATGATCTAGGAC
AAAGCACCGCACAAAAGGCAGCGTCCGACCGTTTCTTCCTTCCCTCCCAC
CCTTCCTCCCTCTCTTTGTTGCCCCCTCAGGTAATCTCTTCTTCGGCAAC
ATCGAACAGCTCTTCCTCCACCTTCGCGAGGTCTTCCACCGCATGCCGCA
CCTCCTCTTCCTCGTCCTCGACATGGGCGAGCTAGCCGGCATAGATTTCT
CGGCACGGGATCGCTTAGTGCGGATGTGCAAGACGATGACGGGGCAAGGG
AAGGAGGGGGGGAGGAGGGTTCACATGGTGTGGGCGGCGTTACACAAACC
TCTGAAGGAGAAGTTGAAAGCTGGAGGGTGTTTTGGGGAGGAGAGAGGTG back to topprotein sequence of jgi.p|Nanoce1779_2|581983 >mRNA_3395-protein ID=mRNA_3395-protein|Name=jgi.p|Nanoce1779_2|581983|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MGGGAEATAGVGRMSMSSLGVIDECRSFPGVLACLDVRLIAWDVVPSQLF
TFLGLVFFSLIHIPVNVPALAATTGTDVDLNKELKAHGVSNLLCGLFGGL
QTYMAYSTSALYFKTGGGYRPCLFLIAALMAAFLLLGQEAITYFPRPLAG
CLLLHLGAVLLYESLVLTWQKAVDMSEYVTIWTITLSMTIIGFMEGVGIG
LLLACGIFVVQCSRNNPIGSAFPGDGLSSKEMRSPAQRKLLAYRLQGSIY
IIRLRGTDGRREGRREGELLGDDDLGQSTAQKAASDRFFLPSHPSSLSLL
PPQVISSSATSNSSSSTFARSSTACRTSSSSSSTWAS* back to topmRNA from alignment at scaffold_6:207947..209764- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3395 ID=mRNA_3395|Name=jgi.p|Nanoce1779_2|581983|organism=Nannochloropsis oceanica|type=mRNA|length=1818bp|location=Sequence derived from alignment at scaffold_6:207947..209764- (Nannochloropsis oceanica)
GGGGGGGGGGGGACGAGGGGGAGGAGGAGCGGGAGGAGGAACGGGAGGGG
TCACATCCGTTGGTAATAATAGTAGTAACAGTACAAGGGTGAACAGGGAT
GGAGGGGGGCTGGAAGGAGGGATGGGAGGAGGGGCCGAAGCGACGGCGGG
CGTGGGGAGGATGTCCATGTCGTCGTTGGGAGTAATTGATGAATGCCGGA
GCTTCCCGGGGGTACTGGCGTGCTTGGACGTGCGGTTAATCGCCTGGGAT
GTTGTGCCATCGCAGCTGTTCACGTTTTTGGGGCTGGTGTTTTTTAGGTG
GGGAGGGAAGGAGGGAGGGAGGGAGGGGGAGAGAGAGGGATTAGTCGCTT
CAGGTACCCACATCGGTCTCCTCCCTCCCTTCCTCTCATCCTCCCTCCGT
CCCTCCCTGCTCTAGTCTTATCCACATCCCAGTCAATGTGCCCGCGCTTG
CGGCCACTACAGGCACAGACGTGGATTTGAACAAGGAGCTCAAGGCCCAC
GGGGTGTCCAATCTGTTGTGTGGCCTCTTCGGGGGCCTGCAGACGTACAT
GGCCTACTCGTGCGTTTATGGGGGGAGGAGGGAGGGGAGGAGGAACAGAG
GGACGGACGGGTGGAGCGAGACTCAATATAAGGCAACATGAGATTCCTGC
CTTGTGCGTGTCTTCAGTCCCACCGATCATTCCTCCTTCTCTCCCTCCCT
CCCTCCCTTCTCTCACCTACAGCACCAGCGCTCTGTACTTCAAAACCGGC
GGTGGGTATCGCCCATGCCTCTTCCTCATCGCGGCACTGATGGCCGCCTT
CCTCCTTCTGGGGCAAGAGGCAATCACCTATTTCCCTCGACCTCTCGCGG
GATGCCTCCTCCTCCACCTCGGAGCGGTGCTGCTGTACGAGAGTCTGGTA
TTGACGTGGCAGAAGGCGGTGGACATGAGTGAATACGTCACAATCTGGAC
CATCACGCTGAGTATGACTATCATCGGCTTCATGGAAGGTAAAATAAGCA
CGTGATTTCCCTCTTTCTCTCCCCCCCTCACTCCCTCCCTCACTTCCCCC
CCTCTTTTCTTTTCTATATTTGCGTGTGTGTGTTAAGTCCTTGGCCGTCT
TCCCTTCCTCCCTATCTCCTCTTTTATACAAGCTCCTGTAGATCGCTTCC
TCATTTCTCAAGCGAAACCCCTCCACGCCCCCACCCCCCCACCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCAGGTGTGGGCATTGGCCTCCTCCTCGC
GTGTGGAATCTTCGTCGTACAGTGTTCGCGCAATAATCCCATCGGGAGTG
CCTTCCCAGGAGACGGGCTCTCCAGCAAGGAAATGCGGTCGCCAGCTCAG
AGGAAGCTCCTCGCTTACCGTTTGCAGGGCTCCATTTACATCATTCGACT
GCGAGGTACCGACGGAAGGAGGGAGGGAAGGAGGGAAGGAGAGCTGCTAG
GGGATGATGATCTAGGACAAAGCACCGCACAAAAGGCAGCGTCCGACCGT
TTCTTCCTTCCCTCCCACCCTTCCTCCCTCTCTTTGTTGCCCCCTCAGGT
AATCTCTTCTTCGGCAACATCGAACAGCTCTTCCTCCACCTTCGCGAGGT
CTTCCACCGCATGCCGCACCTCCTCTTCCTCGTCCTCGACATGGGCGAGC
TAGCCGGCATAGATTTCTCGGCACGGGATCGCTTAGTGCGGATGTGCAAG
ACGATGACGGGGCAAGGGAAGGAGGGGGGGAGGAGGGTTCACATGGTGTG
GGCGGCGTTACACAAACCTCTGAAGGAGAAGTTGAAAGCTGGAGGGTGTT
TTGGGGAGGAGAGAGGTG back to topCoding sequence (CDS) from alignment at scaffold_6:207947..209764- >mRNA_3395 ID=mRNA_3395|Name=jgi.p|Nanoce1779_2|581983|organism=Nannochloropsis oceanica|type=CDS|length=4056bp|location=Sequence derived from alignment at scaffold_6:207947..209764- (Nannochloropsis oceanica)
GTGTGGGCATTGGCCTCCTCCTCGCGTGTGGAATCTTCGTCGTACAGTGT
TCGCGCAATAATCCCATCGGGAGTGCCTTCCCAGGAGACGGGCTCTCCAG
CAAGGAAATGCGGTCGCCAGCTCAGAGGAAGCTCCTCGCTTACCGTTTGC
AGGGCTCCATTTACATCATTCGACTGCGAGGTACCGACGGAAGGAGGGAG
GGAAGGAGGGAAGGAGAGCTGCTAGGGGATGATGATCTAGGACAAAGCAC
CGCACAAAAGGCAGCGTCCGACCGTTTCTTCCTTCCCTCCCACCCTTCCT
CCCTCTCTTTGTTGCCCCCTCAGGTAATCTCTTCTTCGGCAACATCGAAC
AGCTCTTCCTCCACCTTCGCGAGGTCTTCCACCGCATGCCGCACCTCCTC
TTCCTCGTCCTCGACATGGGCGAGCTAGCACCAGCGCTCTGTACTTCAAA
ACCGGCGGTGGGTATCGCCCATGCCTCTTCCTCATCGCGGCACTGATGGC
CGCCTTCCTCCTTCTGGGGCAAGAGGCAATCACCTATTTCCCTCGACCTC
TCGCGGGATGCCTCCTCCTCCACCTCGGAGCGGTGCTGCTGTACGAGAGT
CTGGTATTGACGTGGCAGAAGGCGGTGGACATGAGTGAATACGTCACAAT
CTGGACCATCACGCTGAGTATGACTATCATCGGCTTCATGGAAGTCTTAT
CCACATCCCAGTCAATGTGCCCGCGCTTGCGGCCACTACAGGCACAGACG
TGGATTTGAACAAGGAGCTCAAGGCCCACGGGGTGTCCAATCTGTTGTGT
GGCCTCTTCGGGGGCCTGCAGACGTACATGGCCTACTCATGGGAGGAGGG
GCCGAAGCGACGGCGGGCGTGGGGAGGATGTCCATGTCGTCGTTGGGAGT
AATTGATGAATGCCGGAGCTTCCCGGGGGTACTGGCGTGCTTGGACGTGC
GGTTAATCGCCTGGGATGTTGTGCCATCGCAGCTGTTCACGTTTTTGGGG
CTGGTGTTTTTTAGGTGTGGGCATTGGCCTCCTCCTCGCGTGTGGAATCT
TCGTCGTACAGTGTTCGCGCAATAATCCCATCGGGAGTGCCTTCCCAGGA
GACGGGCTCTCCAGCAAGGAAATGCGGTCGCCAGCTCAGAGGAAGCTCCT
CGCTTACCGTTTGCAGGGCTCCATTTACATCATTCGACTGCGAGGTACCG
ACGGAAGGAGGGAGGGAAGGAGGGAAGGAGAGCTGCTAGGGGATGATGAT
CTAGGACAAAGCACCGCACAAAAGGCAGCGTCCGACCGTTTCTTCCTTCC
CTCCCACCCTTCCTCCCTCTCTTTGTTGCCCCCTCAGGTAATCTCTTCTT
CGGCAACATCGAACAGCTCTTCCTCCACCTTCGCGAGGTCTTCCACCGCA
TGCCGCACCTCCTCTTCCTCGTCCTCGACATGGGCGAGCTAGCACCAGCG
CTCTGTACTTCAAAACCGGCGGTGGGTATCGCCCATGCCTCTTCCTCATC
GCGGCACTGATGGCCGCCTTCCTCCTTCTGGGGCAAGAGGCAATCACCTA
TTTCCCTCGACCTCTCGCGGGATGCCTCCTCCTCCACCTCGGAGCGGTGC
TGCTGTACGAGAGTCTGGTATTGACGTGGCAGAAGGCGGTGGACATGAGT
GAATACGTCACAATCTGGACCATCACGCTGAGTATGACTATCATCGGCTT
CATGGAAGTCTTATCCACATCCCAGTCAATGTGCCCGCGCTTGCGGCCAC
TACAGGCACAGACGTGGATTTGAACAAGGAGCTCAAGGCCCACGGGGTGT
CCAATCTGTTGTGTGGCCTCTTCGGGGGCCTGCAGACGTACATGGCCTAC
TCATGGGAGGAGGGGCCGAAGCGACGGCGGGCGTGGGGAGGATGTCCATG
TCGTCGTTGGGAGTAATTGATGAATGCCGGAGCTTCCCGGGGGTACTGGC
GTGCTTGGACGTGCGGTTAATCGCCTGGGATGTTGTGCCATCGCAGCTGT
TCACGTTTTTGGGGCTGGTGTTTTTTAGGTGTGGGCATTGGCCTCCTCCT
CGCGTGTGGAATCTTCGTCGTACAGTGTTCGCGCAATAATCCCATCGGGA
GTGCCTTCCCAGGAGACGGGCTCTCCAGCAAGGAAATGCGGTCGCCAGCT
CAGAGGAAGCTCCTCGCTTACCGTTTGCAGGGCTCCATTTACATCATTCG
ACTGCGAGGTACCGACGGAAGGAGGGAGGGAAGGAGGGAAGGAGAGCTGC
TAGGGGATGATGATCTAGGACAAAGCACCGCACAAAAGGCAGCGTCCGAC
CGTTTCTTCCTTCCCTCCCACCCTTCCTCCCTCTCTTTGTTGCCCCCTCA
GGTAATCTCTTCTTCGGCAACATCGAACAGCTCTTCCTCCACCTTCGCGA
GGTCTTCCACCGCATGCCGCACCTCCTCTTCCTCGTCCTCGACATGGGCG
AGCTAGCACCAGCGCTCTGTACTTCAAAACCGGCGGTGGGTATCGCCCAT
GCCTCTTCCTCATCGCGGCACTGATGGCCGCCTTCCTCCTTCTGGGGCAA
GAGGCAATCACCTATTTCCCTCGACCTCTCGCGGGATGCCTCCTCCTCCA
CCTCGGAGCGGTGCTGCTGTACGAGAGTCTGGTATTGACGTGGCAGAAGG
CGGTGGACATGAGTGAATACGTCACAATCTGGACCATCACGCTGAGTATG
ACTATCATCGGCTTCATGGAAGTCTTATCCACATCCCAGTCAATGTGCCC
GCGCTTGCGGCCACTACAGGCACAGACGTGGATTTGAACAAGGAGCTCAA
GGCCCACGGGGTGTCCAATCTGTTGTGTGGCCTCTTCGGGGGCCTGCAGA
CGTACATGGCCTACTCATGGGAGGAGGGGCCGAAGCGACGGCGGGCGTGG
GGAGGATGTCCATGTCGTCGTTGGGAGTAATTGATGAATGCCGGAGCTTC
CCGGGGGTACTGGCGTGCTTGGACGTGCGGTTAATCGCCTGGGATGTTGT
GCCATCGCAGCTGTTCACGTTTTTGGGGCTGGTGTTTTTTAGGTGTGGGC
ATTGGCCTCCTCCTCGCGTGTGGAATCTTCGTCGTACAGTGTTCGCGCAA
TAATCCCATCGGGAGTGCCTTCCCAGGAGACGGGCTCTCCAGCAAGGAAA
TGCGGTCGCCAGCTCAGAGGAAGCTCCTCGCTTACCGTTTGCAGGGCTCC
ATTTACATCATTCGACTGCGAGGTACCGACGGAAGGAGGGAGGGAAGGAG
GGAAGGAGAGCTGCTAGGGGATGATGATCTAGGACAAAGCACCGCACAAA
AGGCAGCGTCCGACCGTTTCTTCCTTCCCTCCCACCCTTCCTCCCTCTCT
TTGTTGCCCCCTCAGGTAATCTCTTCTTCGGCAACATCGAACAGCTCTTC
CTCCACCTTCGCGAGGTCTTCCACCGCATGCCGCACCTCCTCTTCCTCGT
CCTCGACATGGGCGAGCTAGCACCAGCGCTCTGTACTTCAAAACCGGCGG
TGGGTATCGCCCATGCCTCTTCCTCATCGCGGCACTGATGGCCGCCTTCC
TCCTTCTGGGGCAAGAGGCAATCACCTATTTCCCTCGACCTCTCGCGGGA
TGCCTCCTCCTCCACCTCGGAGCGGTGCTGCTGTACGAGAGTCTGGTATT
GACGTGGCAGAAGGCGGTGGACATGAGTGAATACGTCACAATCTGGACCA
TCACGCTGAGTATGACTATCATCGGCTTCATGGAAGTCTTATCCACATCC
CAGTCAATGTGCCCGCGCTTGCGGCCACTACAGGCACAGACGTGGATTTG
AACAAGGAGCTCAAGGCCCACGGGGTGTCCAATCTGTTGTGTGGCCTCTT
CGGGGGCCTGCAGACGTACATGGCCTACTCATGGGAGGAGGGGCCGAAGC
GACGGCGGGCGTGGGGAGGATGTCCATGTCGTCGTTGGGAGTAATTGATG
AATGCCGGAGCTTCCCGGGGGTACTGGCGTGCTTGGACGTGCGGTTAATC
GCCTGGGATGTTGTGCCATCGCAGCTGTTCACGTTTTTGGGGCTGGTGTT
TTTTAG back to top
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