jgi.p|Nanoce1779_2|636698, mRNA_337 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|636698
Unique NamemRNA_337
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length384
Alignment locationscaffold_3:830773..831156 -

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Properties
Property NameValue
TranscriptId636784
TrackFilteredModels2
ProteinId636698
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:830773..831156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636698gene_337Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_337CDS_337Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636698mRNA_337-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_337 ID=mRNA_337|Name=jgi.p|Nanoce1779_2|636698|organism=Nannochloropsis oceanica|type=mRNA|length=384bp
ATGGGAGCCAAGAAGGGCGGCAGCAGTGGAGGGGGAGGTAAGGGTGGCCG
GCCGCAGCCCTTTTTCACAGAGGTGGACCCTGCTATTATCTATTTCTCGC
ACGCGCGCATCCGCACAACATTTTCAGGCTGCGGGCGGAGGGTGGAGGAC
ACATTGACAGAAATTGTGGAGGGAAAACTGAATCCGGAAGCGCTGCCTTA
TATAACTGTCATGTTGGACCGCGCCACGGGGACGTACTTCTCTCTCAACA
ACCGACGCTTGTGGGTGTTCAAGGAATGCAAGAAGCGAGGTCTATTGGAA
CACATCCGCGTGCGCGTACGGACTGAAGAATCTCGGTATACAGCCGAAAC
CTGTGCGCTGGAAGCCAAGATGTGTTTAAAGTAA
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protein sequence of jgi.p|Nanoce1779_2|636698

>mRNA_337-protein ID=mRNA_337-protein|Name=jgi.p|Nanoce1779_2|636698|organism=Nannochloropsis oceanica|type=polypeptide|length=128bp
MGAKKGGSSGGGGKGGRPQPFFTEVDPAIIYFSHARIRTTFSGCGRRVED
TLTEIVEGKLNPEALPYITVMLDRATGTYFSLNNRRLWVFKECKKRGLLE
HIRVRVRTEESRYTAETCALEAKMCLK*
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mRNA from alignment at scaffold_3:830773..831156-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_337 ID=mRNA_337|Name=jgi.p|Nanoce1779_2|636698|organism=Nannochloropsis oceanica|type=mRNA|length=384bp|location=Sequence derived from alignment at scaffold_3:830773..831156- (Nannochloropsis oceanica)
ATGGGAGCCAAGAAGGGCGGCAGCAGTGGAGGGGGAGGTAAGGGTGGCCG
GCCGCAGCCCTTTTTCACAGAGGTGGACCCTGCTATTATCTATTTCTCGC
ACGCGCGCATCCGCACAACATTTTCAGGCTGCGGGCGGAGGGTGGAGGAC
ACATTGACAGAAATTGTGGAGGGAAAACTGAATCCGGAAGCGCTGCCTTA
TATAACTGTCATGTTGGACCGCGCCACGGGGACGTACTTCTCTCTCAACA
ACCGACGCTTGTGGGTGTTCAAGGAATGCAAGAAGCGAGGTCTATTGGAA
CACATCCGCGTGCGCGTACGGACTGAAGAATCTCGGTATACAGCCGAAAC
CTGTGCGCTGGAAGCCAAGATGTGTTTAAAGTAA
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Coding sequence (CDS) from alignment at scaffold_3:830773..831156-

>mRNA_337 ID=mRNA_337|Name=jgi.p|Nanoce1779_2|636698|organism=Nannochloropsis oceanica|type=CDS|length=384bp|location=Sequence derived from alignment at scaffold_3:830773..831156- (Nannochloropsis oceanica)
ATGGGAGCCAAGAAGGGCGGCAGCAGTGGAGGGGGAGGTAAGGGTGGCCG
GCCGCAGCCCTTTTTCACAGAGGTGGACCCTGCTATTATCTATTTCTCGC
ACGCGCGCATCCGCACAACATTTTCAGGCTGCGGGCGGAGGGTGGAGGAC
ACATTGACAGAAATTGTGGAGGGAAAACTGAATCCGGAAGCGCTGCCTTA
TATAACTGTCATGTTGGACCGCGCCACGGGGACGTACTTCTCTCTCAACA
ACCGACGCTTGTGGGTGTTCAAGGAATGCAAGAAGCGAGGTCTATTGGAA
CACATCCGCGTGCGCGTACGGACTGAAGAATCTCGGTATACAGCCGAAAC
CTGTGCGCTGGAAGCCAAGATGTGTTTAAAGTAA
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Synonyms
Publications