Properties
| Property Name | Value |
|---|
| TranscriptId | 357679 |
| Track | FilteredModels2 |
| ProteinId | 357593 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:45466..46321 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3338 ID=mRNA_3338|Name=jgi.p|Nanoce1779_2|357593|organism=Nannochloropsis oceanica|type=mRNA|length=856bp
CTGGATGCGCTGTTCCAGCGCCGAGGGAGGGAGGTAGGGAAGGGCGAAAG
AAGGACTACTGGAAGAACAGATGTTCACTGCCTGAAGAAATGGAGAAAGG
GCGAGGGATGAGGATCAGAGAAAGGGCAAAGGATTCAAAGAAAAGTGGGA
CTGGCCCATACGCCCTGTGCTTAGAGACCTCTTTTACTCTTCATTCTGGC
TTTCGTTGTCATTCTTTATTTTTTATGAAAATTCAGTCCTGCGTGTGTGT
GTGTGTGTGCGTGTGCGTGCGTGTGTGCGTGTGTGTGTGTGCGTGTGTGC
GCCTCTCAAAACTGTCAAAACGTGTCGCCATACCGGCTTTCATCTTCTGC
ACTTCCTACCCCTCCCCCTACCGCATGTCTGATCTCTTGCTTGAAAATAT
CATGATGACCGGTACTCTTTTTCTTCTGTGTGCCTGTGTGCCCTATTTCC
TCCTTTCTATTTCTTCTTCTTCTCCTCCTCTTCCCATGATCTACTCTTCA
TGCGATCTCTACATCGATCCACCTTTTTTCTCTCCTTCTCTGACTTCCTA
CCTATCTCCTGAGTGACCGATGTGTACCGTCTTCCTAATCAAACCAACCT
TGGGCTCATATGATATCCTCATTCCCTTCTTTCTCACCCTCCCTCCTTTC
CTCCTCCTCCTCCTCCTCCCACTCGTAGCATTCAATTTCCCCTCCATCCG
ATCACACGACAGACACCGGCACATATACTACAGTCAGTCTCGACCTCTCC
TCAGTACCCTCCACGTCCAGTTTGGCCCCCCTCCCTCCCTCTCTCCCTCC
CTCCCTCCCTCATAAAGCCACCACTGTTACAGTTCGAGGCCGCGACTGGA
ATGACT back to topprotein sequence of jgi.p|Nanoce1779_2|357593 >mRNA_3338-protein ID=mRNA_3338-protein|Name=jgi.p|Nanoce1779_2|357593|organism=Nannochloropsis oceanica|type=polypeptide|length=159bp
MEKGRGMRIRERAKDSKKSGTGPYALCLETSFTLHSGFRCHSLFFMKIQS
CVCVCVCVCVRVCVCVCACVRLSKLSKRVAIPAFIFCTSYPSPYRMSDLL
LENIMMTGTLFLLCACVPYFLLSISSSSPPLPMIYSSCDLYIDPPFFSPS
LTSYLSPE* back to topmRNA from alignment at scaffold_6:45466..46321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3338 ID=mRNA_3338|Name=jgi.p|Nanoce1779_2|357593|organism=Nannochloropsis oceanica|type=mRNA|length=856bp|location=Sequence derived from alignment at scaffold_6:45466..46321- (Nannochloropsis oceanica)
CTGGATGCGCTGTTCCAGCGCCGAGGGAGGGAGGTAGGGAAGGGCGAAAG
AAGGACTACTGGAAGAACAGATGTTCACTGCCTGAAGAAATGGAGAAAGG
GCGAGGGATGAGGATCAGAGAAAGGGCAAAGGATTCAAAGAAAAGTGGGA
CTGGCCCATACGCCCTGTGCTTAGAGACCTCTTTTACTCTTCATTCTGGC
TTTCGTTGTCATTCTTTATTTTTTATGAAAATTCAGTCCTGCGTGTGTGT
GTGTGTGTGCGTGTGCGTGCGTGTGTGCGTGTGTGTGTGTGCGTGTGTGC
GCCTCTCAAAACTGTCAAAACGTGTCGCCATACCGGCTTTCATCTTCTGC
ACTTCCTACCCCTCCCCCTACCGCATGTCTGATCTCTTGCTTGAAAATAT
CATGATGACCGGTACTCTTTTTCTTCTGTGTGCCTGTGTGCCCTATTTCC
TCCTTTCTATTTCTTCTTCTTCTCCTCCTCTTCCCATGATCTACTCTTCA
TGCGATCTCTACATCGATCCACCTTTTTTCTCTCCTTCTCTGACTTCCTA
CCTATCTCCTGAGTGACCGATGTGTACCGTCTTCCTAATCAAACCAACCT
TGGGCTCATATGATATCCTCATTCCCTTCTTTCTCACCCTCCCTCCTTTC
CTCCTCCTCCTCCTCCTCCCACTCGTAGCATTCAATTTCCCCTCCATCCG
ATCACACGACAGACACCGGCACATATACTACAGTCAGTCTCGACCTCTCC
TCAGTACCCTCCACGTCCAGTTTGGCCCCCCTCCCTCCCTCTCTCCCTCC
CTCCCTCCCTCATAAAGCCACCACTGTTACAGTTCGAGGCCGCGACTGGA
ATGACT back to topCoding sequence (CDS) from alignment at scaffold_6:45466..46321- >mRNA_3338 ID=mRNA_3338|Name=jgi.p|Nanoce1779_2|357593|organism=Nannochloropsis oceanica|type=CDS|length=477bp|location=Sequence derived from alignment at scaffold_6:45466..46321- (Nannochloropsis oceanica)
ATGGAGAAAGGGCGAGGGATGAGGATCAGAGAAAGGGCAAAGGATTCAAA
GAAAAGTGGGACTGGCCCATACGCCCTGTGCTTAGAGACCTCTTTTACTC
TTCATTCTGGCTTTCGTTGTCATTCTTTATTTTTTATGAAAATTCAGTCC
TGCGTGTGTGTGTGTGTGTGCGTGTGCGTGCGTGTGTGCGTGTGTGTGTG
TGCGTGTGTGCGCCTCTCAAAACTGTCAAAACGTGTCGCCATACCGGCTT
TCATCTTCTGCACTTCCTACCCCTCCCCCTACCGCATGTCTGATCTCTTG
CTTGAAAATATCATGATGACCGGTACTCTTTTTCTTCTGTGTGCCTGTGT
GCCCTATTTCCTCCTTTCTATTTCTTCTTCTTCTCCTCCTCTTCCCATGA
TCTACTCTTCATGCGATCTCTACATCGATCCACCTTTTTTCTCTCCTTCT
CTGACTTCCTACCTATCTCCTGAGTGA back to top
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