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Properties
| Property Name | Value |
|---|
| TranscriptId | 581859 |
| Track | FilteredModels2 |
| ProteinId | 581773 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:34665..35979 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3333 ID=mRNA_3333|Name=jgi.p|Nanoce1779_2|581773|organism=Nannochloropsis oceanica|type=mRNA|length=1131bp
TATCATGGGCGGTCTCTCCATGCACCTGCGACGGTCCCGCGTAAACGAGG
CCCAAGTCATGTGGCTCCACGACGTATGCCTGCAGATGAAGCAAGCCCTC
CAACAGGCCGCCCACCTCCGCAACAATTTCCAATCCAATATGCAGCATCA
TCAGCCAGTAGGGGGACTTGACGGTGAACCTTGTCTGACCCAGTTGAACT
CCTCCTCCTCCTGCTCCTCTTTGTATGTGACAGGAAAAGGACGAGACGAT
GGGTTAGAAATGCTGGGAGGGAGACACGTTGATAAAGGGAGTGAGGAGGC
ATGCCGCACCCGCCTATACTCATCGACGACCTCGGTCCACAAGGTCGCGC
CAACTAGCTGCATTACGTCCAAGGCAGCCTCCTCCGCCCTCGCGCCATCC
CTCCCTCCCTCCCCCCAGTCAGCTGTGTTTAAGGCACCGTTTTTGGCCAC
TGCTGCTGCTGCTGCTGATGGTCCAGTCGCCCCTGTTTGTTTCCATCGAA
ATTCCTCCAGCTCCTCCACGGCGTTGCCTGTGGCCGCTTTGGGAGGAGAG
GGCACCTTATATCCGCACTCCCACGGCCAGGAGGAGAAGCAGCAGCAGCT
CCAGCACCAACTCGACCAGCAACAGGAACGAAAGGATGGCAGGGGTCCCC
CTTTTGAGAAGGTGGACAGGGTGTGGGAGGCCGAGTGTGCGCTGGCAAGG
CTGAGGATTAAGTGCGCCGGAATCTTAAGTCGGGTGCTCACCTTGGTGGA
TTTCATGGATATAGAGTCCTTGACGCCATTTCAGAAGAAATGTATGGTCT
TGATCAAAGAGGCGGCTCAAGCAGACCTGGTATAGCTGTCGCAGCAGCAG
TAGATACATATGCATAGACGACACAGAGGGAATAAAGTTAGGTACAAAAA
GACCTGTGAAACAGAGCAGTAAAAAAAACTCTTAAAAAATGGACAGAGAA
GCACATAAAATTATCCAGTGATGTTTTTAAATGTGCACCGTGATGAAAGA
ACATGTGCATCGTCTCTATCAGGGAGGATGCTTGTATGAGTGTCTTTGCG
CATGAATGCACGGCTGTATGCGTACGTTTGTGTACAAAAAGAAATAAAGT
GATAGAAAGAAGAAAGACACGTGACTAAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|581773 >mRNA_3333-protein ID=mRNA_3333-protein|Name=jgi.p|Nanoce1779_2|581773|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MGGLSMHLRRSRVNEAQVMWLHDVCLQMKQALQQAAHLRNNFQSNMQHHQ
PVGGLDGEPCLTQLNSSSSCSSLYVTGKGRDDGLEMLGGRHVDKGSEEAC
RTRLYSSTTSVHKVAPTSCITSKAASSALAPSLPPSPQSAVFKAPFLATA
AAAADGPVAPVCFHRNSSSSSTALPVAALGGEGTLYPHSHGQEEKQQQLQ
HQLDQQQERKDGRGPPFEKVDRVWEAECALARLRIKCAGILSRVLTLVDF
MDIESLTPFQKKCMVLIKEAAQADLV* back to topmRNA from alignment at scaffold_6:34665..35979- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3333 ID=mRNA_3333|Name=jgi.p|Nanoce1779_2|581773|organism=Nannochloropsis oceanica|type=mRNA|length=1315bp|location=Sequence derived from alignment at scaffold_6:34665..35979- (Nannochloropsis oceanica)
TATCATGGGCGGTCTCTCCATGCACCTGCGACGGTCCCGCGTAAACGAGG
CCCAAGTCATGTGGCTCCACGACGTATGCCTGCAGATGAAGCAAGCCCTC
CAACAGGCCGCCCACCTCCGCAACAATTTCCAATCCAATATGCAGCATCA
TCAGCCAGTAGGGGGACTTGACGGTGAACCTTGTCTGACCCAGTTGAACT
CCTCCTCCTCCTGCTCCTCTTTGTATGTGACAGGAAAAGGACGAGACGAT
GGGTTAGAAATGCTGGGAGGGAGACACGTTGATAAAGGGAGTGAGGAGGC
ATGCCGCACCCGCCTATACTCATCGACGACCTCGGTCCACAAGGTCGCGC
CAACTAGCTGCATTACGTCCAAGGCAGCCTCCTCCGCCCTCGCGCCATCC
CTCCCTCCCTCCCCCCAGTCAGCTGTGTTTAAGGCACCGTTTTTGGCCAC
TGCTGCTGCTGCTGCTGATGGTCCAGTCGCCCCTGTTTGTTTCCATCGAA
ATTCCTCCAGCTCCTCCACGGCGTTGCCTGTGGCCGCTTTGGGAGGAGAG
GGCACCTTATATCCGCACTCCCACGGCCAGGAGGAGAAGCAGCAGCAGCT
CCAGCACCAACTCGACCAGCAACAGGAACGAAAGGATGGCAGGGGTCCCC
CTTTTGAGAAGGTGGACAGGGTGTGGGAGGCCGAGTGTGCGCTGGCAAGG
CTGAGGATTAAGTGCGCCGGAATCTTAAGTCGGGTGCTCACCTTGGTGGA
TTTCATGGATGTGAGTAGAGCGGGAGAGTAAAAAAGGGGAGGAAGGCGAA
GAAGGGGGACTAAATTGGTGGCGTAATAGTTGAGCATCAGTCACAGAACT
GCTACTCCCATTCTTTCATCCCGCCATGTACGTACGTACGTAACTCACGT
TCACATCTCTCTCTTCCTCCCGCCCATCTTCACTCGACATACAGATAGAG
TCCTTGACGCCATTTCAGAAGAAATGTATGGTCTTGATCAAAGAGGCGGC
TCAAGCAGACCTGGTATAGCTGTCGCAGCAGCAGTAGATACATATGCATA
GACGACACAGAGGGAATAAAGTTAGGTACAAAAAGACCTGTGAAACAGAG
CAGTAAAAAAAACTCTTAAAAAATGGACAGAGAAGCACATAAAATTATCC
AGTGATGTTTTTAAATGTGCACCGTGATGAAAGAACATGTGCATCGTCTC
TATCAGGGAGGATGCTTGTATGAGTGTCTTTGCGCATGAATGCACGGCTG
TATGCGTACGTTTGTGTACAAAAAGAAATAAAGTGATAGAAAGAAGAAAG
ACACGTGACTAAGAA back to topCoding sequence (CDS) from alignment at scaffold_6:34665..35979- >mRNA_3333 ID=mRNA_3333|Name=jgi.p|Nanoce1779_2|581773|organism=Nannochloropsis oceanica|type=CDS|length=1662bp|location=Sequence derived from alignment at scaffold_6:34665..35979- (Nannochloropsis oceanica)
ATAGAGTCCTTGACGCCATTTCAGAAGAAATGTATGGTCTTGATCAAAGA
GGCGGCTCAAGCAGACCTGGTATAGATGGGCGGTCTCTCCATGCACCTGC
GACGGTCCCGCGTAAACGAGGCCCAAGTCATGTGGCTCCACGACGTATGC
CTGCAGATGAAGCAAGCCCTCCAACAGGCCGCCCACCTCCGCAACAATTT
CCAATCCAATATGCAGCATCATCAGCCAGTAGGGGGACTTGACGGTGAAC
CTTGTCTGACCCAGTTGAACTCCTCCTCCTCCTGCTCCTCTTTGTATGTG
ACAGGAAAAGGACGAGACGATGGGTTAGAAATGCTGGGAGGGAGACACGT
TGATAAAGGGAGTGAGGAGGCATGCCGCACCCGCCTATACTCATCGACGA
CCTCGGTCCACAAGGTCGCGCCAACTAGCTGCATTACGTCCAAGGCAGCC
TCCTCCGCCCTCGCGCCATCCCTCCCTCCCTCCCCCCAGTCAGCTGTGTT
TAAGGCACCGTTTTTGGCCACTGCTGCTGCTGCTGCTGATGGTCCAGTCG
CCCCTGTTTGTTTCCATCGAAATTCCTCCAGCTCCTCCACGGCGTTGCCT
GTGGCCGCTTTGGGAGGAGAGGGCACCTTATATCCGCACTCCCACGGCCA
GGAGGAGAAGCAGCAGCAGCTCCAGCACCAACTCGACCAGCAACAGGAAC
GAAAGGATGGCAGGGGTCCCCCTTTTGAGAAGGTGGACAGGGTGTGGGAG
GCCGAGTGTGCGCTGGCAAGGCTGAGGATTAAGTGCGCCGGAATCTTAAG
TCGGGTGCTCACCTTGGTGGATTTCATGGATATAGAGTCCTTGACGCCAT
TTCAGAAGAAATGTATGGTCTTGATCAAAGAGGCGGCTCAAGCAGACCTG
GTATAGATGGGCGGTCTCTCCATGCACCTGCGACGGTCCCGCGTAAACGA
GGCCCAAGTCATGTGGCTCCACGACGTATGCCTGCAGATGAAGCAAGCCC
TCCAACAGGCCGCCCACCTCCGCAACAATTTCCAATCCAATATGCAGCAT
CATCAGCCAGTAGGGGGACTTGACGGTGAACCTTGTCTGACCCAGTTGAA
CTCCTCCTCCTCCTGCTCCTCTTTGTATGTGACAGGAAAAGGACGAGACG
ATGGGTTAGAAATGCTGGGAGGGAGACACGTTGATAAAGGGAGTGAGGAG
GCATGCCGCACCCGCCTATACTCATCGACGACCTCGGTCCACAAGGTCGC
GCCAACTAGCTGCATTACGTCCAAGGCAGCCTCCTCCGCCCTCGCGCCAT
CCCTCCCTCCCTCCCCCCAGTCAGCTGTGTTTAAGGCACCGTTTTTGGCC
ACTGCTGCTGCTGCTGCTGATGGTCCAGTCGCCCCTGTTTGTTTCCATCG
AAATTCCTCCAGCTCCTCCACGGCGTTGCCTGTGGCCGCTTTGGGAGGAG
AGGGCACCTTATATCCGCACTCCCACGGCCAGGAGGAGAAGCAGCAGCAG
CTCCAGCACCAACTCGACCAGCAACAGGAACGAAAGGATGGCAGGGGTCC
CCCTTTTGAGAAGGTGGACAGGGTGTGGGAGGCCGAGTGTGCGCTGGCAA
GGCTGAGGATTAAGTGCGCCGGAATCTTAAGTCGGGTGCTCACCTTGGTG
GATTTCATGGAT back to top
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