Properties
| Property Name | Value |
|---|
| TranscriptId | 623096 |
| Track | FilteredModels2 |
| ProteinId | 623010 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:1136837..1138110 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3298 ID=mRNA_3298|Name=jgi.p|Nanoce1779_2|623010|organism=Nannochloropsis oceanica|type=mRNA|length=690bp
ATGAAGGCTCGGTTGGAAGGGGCACGATTCCGAGACATAAATGAGATGCT
GTATACGTCCGAGGGGAATCACGCCCTCAACACCTTCAAGCAGGAGCCTG
AGCTTTTCGAAGCGTATCACAAGGGTTACCGCGAGCAAGCCCTCAAATGG
CCCCGGAATCCACTCGACGACATGATTGACTGGGTCCGGAAACAGCCACG
CACACACTCCTTTGCTGATTTTGGCTGTGGCGAGGCCAGGTTGGCTGCCT
CTTGCCCGGCACACACGGTGCATTCCTTTGACCTCGTGGTGCCGGCCGGG
AAGCAAGGGGAAGAGGGACGGAAGGAGGGGAAGAAGCGGGTGAAGGTGAC
GGCGTGTGACATAGCCCATGTGCCTTTGAGGAATGCAAGTGTCCACGGGG
TTATTTTTTGTCTGTCGTTAATGGGGACGAATATGATGGACTATGTGAAG
GAGGCGGTGAGGGTGTGTGTGGACGGAGGCGCGATCAAGGTGGCTGAAGT
GAGGAGCAGGTTCGAAGGAGGGGGAGGGGGAGGGGAAGGAGGAGGGGGGG
AGGGAGGGATTGAGGGTTTTGTGGCGGCTTGCAAGGGGCTTGGGTTGGAG
TGTAAGAAGCTAGAGAGAAAGAATAAAATGTTTTTTACTTTAGATTTTGT
GAAGGTCGGTGCCAAACCCTGCCTCTACAAACGGCGCTAG back to topprotein sequence of jgi.p|Nanoce1779_2|623010 >mRNA_3298-protein ID=mRNA_3298-protein|Name=jgi.p|Nanoce1779_2|623010|organism=Nannochloropsis oceanica|type=polypeptide|length=230bp
MKARLEGARFRDINEMLYTSEGNHALNTFKQEPELFEAYHKGYREQALKW
PRNPLDDMIDWVRKQPRTHSFADFGCGEARLAASCPAHTVHSFDLVVPAG
KQGEEGRKEGKKRVKVTACDIAHVPLRNASVHGVIFCLSLMGTNMMDYVK
EAVRVCVDGGAIKVAEVRSRFEGGGGGGEGGGGEGGIEGFVAACKGLGLE
CKKLERKNKMFFTLDFVKVGAKPCLYKRR* back to topmRNA from alignment at scaffold_7:1136837..1138110- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3298 ID=mRNA_3298|Name=jgi.p|Nanoce1779_2|623010|organism=Nannochloropsis oceanica|type=mRNA|length=1274bp|location=Sequence derived from alignment at scaffold_7:1136837..1138110- (Nannochloropsis oceanica)
ATGAAGGCTCGGTTGGAAGGGGCACGATTCCGAGACATAAATGAGATGCT
GTATACGTCCGAGGGGAATCACGCCCTCAACACCTTCAAGCAGGAGCCTG
AGCTTTTCGAAGCGGTACGTTAATGTGCTCATGTACAGAAATATATAAAA
CCTTATCCCATCCTTTCGTATTCTCTCGCTGATTTGCTCATTACCATATA
TCATCGAAATTTGTTTTCCTAGTATCCTCATCCCTCCTTCCCTCCATCTC
TCTCTCCCTCCCGTTCCCTCCCTCCTTGCAGTATCACAAGGGTTACCGCG
AGCAAGCCCTCAAATGGCCCCGGAATCCACTCGACGACATGATTGACTGG
GTCCGGAAACAGCCACGCACACACTCCTTTGCTGATTTTGGCTGTGGCGA
GGCCAGGTTGGCTGCCTCTTGCCCGGCACACACGGTGCATTCCTTTGACC
TCGTGGTGCCGGCCGGGAAGCAAGGGGAAGAGGGACGGAAGGAGGGGAAG
AAGCGGGTGAAGGTGACGGCGTGTGACATAGCCCATGTGCCTTTGAGGAA
TGCAAGTGTCCACGGGGTTATTTTTTGTCTGTCGTTAATGGGGACGAATA
TGATGGACTATGTGAAGGAGGCGGTGAGGGTGTGTGTGGACGGAGGCGCG
ATCAAGGTGGCTGAAGTGAGGAGCAGGTTCGAAGGAGGGGGAGGGGGAGG
GGAAGGAGGAGGGGGGGAGGGAGGGATTGAGGGTTTTGTGGCGGCTTGCA
AGGGGCTTGGGTTGGAGTGTAAGAAGCTAGAGAGAAAGAATAAAATGTTT
TTTACTTTAGATTTTGTGAAGGTCGGTGGTGGAGGGAAAGGAGTGGAGGG
AGGCCAAAAGGAGGAGGATGCCGGTAAGGAGGCGGCGCTGGTTGTGTCTG
CACGGGAGGGAGGGGTCGGAGGAGGGAGGGGAGGAGGGAAGGGAGGAAGA
GGGGGGGGACGGTTGGACGGAGGAGGAGGGCGGGGAGGAGATAAGGGGGA
TGAAGGTTCAAGAAGGGGAGGAAGGGGGAGGGGGGAGATGGGAGGAAGAG
ATTGCAGGTGGAACCACGGAGGAAAACGAGGTGGAGGAAGAGGGAGGAGT
GGATTTGAAGAGATGAGCCGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACAGA
GGGGGCGGAAGGGAGGAGGTGAAGGATCAGGTCTCACTTTTCAAGCCAAA
CCCTGCCTCTACAAACGGCGCTAG back to topCoding sequence (CDS) from alignment at scaffold_7:1136837..1138110- >mRNA_3298 ID=mRNA_3298|Name=jgi.p|Nanoce1779_2|623010|organism=Nannochloropsis oceanica|type=CDS|length=2070bp|location=Sequence derived from alignment at scaffold_7:1136837..1138110- (Nannochloropsis oceanica)
CCAAACCCTGCCTCTACAAACGGCGCTAGTATCACAAGGGTTACCGCGAG
CAAGCCCTCAAATGGCCCCGGAATCCACTCGACGACATGATTGACTGGGT
CCGGAAACAGCCACGCACACACTCCTTTGCTGATTTTGGCTGTGGCGAGG
CCAGGTTGGCTGCCTCTTGCCCGGCACACACGGTGCATTCCTTTGACCTC
GTGGTGCCGGCCGGGAAGCAAGGGGAAGAGGGACGGAAGGAGGGGAAGAA
GCGGGTGAAGGTGACGGCGTGTGACATAGCCCATGTGCCTTTGAGGAATG
CAAGTGTCCACGGGGTTATTTTTTGTCTGTCGTTAATGGGGACGAATATG
ATGGACTATGTGAAGGAGGCGGTGAGGGTGTGTGTGGACGGAGGCGCGAT
CAAGGTGGCTGAAGTGAGGAGCAGGTTCGAAGGAGGGGGAGGGGGAGGGG
AAGGAGGAGGGGGGGAGGGAGGGATTGAGGGTTTTGTGGCGGCTTGCAAG
GGGCTTGGGTTGGAGTGTAAGAAGCTAGAGAGAAAGAATAAAATGTTTTT
TACTTTAGATTTTGTGAAGGTCGGTGATGAAGGCTCGGTTGGAAGGGGCA
CGATTCCGAGACATAAATGAGATGCTGTATACGTCCGAGGGGAATCACGC
CCTCAACACCTTCAAGCAGGAGCCTGAGCTTTTCGAAGCGCCAAACCCTG
CCTCTACAAACGGCGCTAGTATCACAAGGGTTACCGCGAGCAAGCCCTCA
AATGGCCCCGGAATCCACTCGACGACATGATTGACTGGGTCCGGAAACAG
CCACGCACACACTCCTTTGCTGATTTTGGCTGTGGCGAGGCCAGGTTGGC
TGCCTCTTGCCCGGCACACACGGTGCATTCCTTTGACCTCGTGGTGCCGG
CCGGGAAGCAAGGGGAAGAGGGACGGAAGGAGGGGAAGAAGCGGGTGAAG
GTGACGGCGTGTGACATAGCCCATGTGCCTTTGAGGAATGCAAGTGTCCA
CGGGGTTATTTTTTGTCTGTCGTTAATGGGGACGAATATGATGGACTATG
TGAAGGAGGCGGTGAGGGTGTGTGTGGACGGAGGCGCGATCAAGGTGGCT
GAAGTGAGGAGCAGGTTCGAAGGAGGGGGAGGGGGAGGGGAAGGAGGAGG
GGGGGAGGGAGGGATTGAGGGTTTTGTGGCGGCTTGCAAGGGGCTTGGGT
TGGAGTGTAAGAAGCTAGAGAGAAAGAATAAAATGTTTTTTACTTTAGAT
TTTGTGAAGGTCGGTGATGAAGGCTCGGTTGGAAGGGGCACGATTCCGAG
ACATAAATGAGATGCTGTATACGTCCGAGGGGAATCACGCCCTCAACACC
TTCAAGCAGGAGCCTGAGCTTTTCGAAGCGCCAAACCCTGCCTCTACAAA
CGGCGCTAGTATCACAAGGGTTACCGCGAGCAAGCCCTCAAATGGCCCCG
GAATCCACTCGACGACATGATTGACTGGGTCCGGAAACAGCCACGCACAC
ACTCCTTTGCTGATTTTGGCTGTGGCGAGGCCAGGTTGGCTGCCTCTTGC
CCGGCACACACGGTGCATTCCTTTGACCTCGTGGTGCCGGCCGGGAAGCA
AGGGGAAGAGGGACGGAAGGAGGGGAAGAAGCGGGTGAAGGTGACGGCGT
GTGACATAGCCCATGTGCCTTTGAGGAATGCAAGTGTCCACGGGGTTATT
TTTTGTCTGTCGTTAATGGGGACGAATATGATGGACTATGTGAAGGAGGC
GGTGAGGGTGTGTGTGGACGGAGGCGCGATCAAGGTGGCTGAAGTGAGGA
GCAGGTTCGAAGGAGGGGGAGGGGGAGGGGAAGGAGGAGGGGGGGAGGGA
GGGATTGAGGGTTTTGTGGCGGCTTGCAAGGGGCTTGGGTTGGAGTGTAA
GAAGCTAGAGAGAAAGAATAAAATGTTTTTTACTTTAGATTTTGTGAAGG
TCGGTGATGAAGGCTCGGTTGGAAGGGGCACGATTCCGAGACATAAATGA
GATGCTGTATACGTCCGAGGGGAATCACGCCCTCAACACCTTCAAGCAGG
AGCCTGAGCTTTTCGAAGCG back to top
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