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Properties
| Property Name | Value |
|---|
| TranscriptId | 526904 |
| Track | FilteredModels2 |
| ProteinId | 526818 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:1123033..1124113 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3292 ID=mRNA_3292|Name=jgi.p|Nanoce1779_2|526818|organism=Nannochloropsis oceanica|type=mRNA|length=732bp
ATGCGGGAGCTTTCCATGCTGCACCGCAAGCGCTTATTGGTGTCCTTTGA
CGACTCTGCGGAAGCGAAAAAAGAGAGGGAGATACAATCGTTGACGGATG
CGATAACGGATCGGTTTCGAGGGGCCGAGAGACAGCTGACAGCCGTTGGG
AAGCAGAAAGGGGACGAGAGCGATTCGGAGATAAAAGTCCGTCGTAACCT
TCAAAAATCCCTCGCTTGCAAGATACAACGTCTCTCCCATGCCTTCCGCT
CCCAACAAAAAGATTACCTAGGCAAACTCCGAGCGCAGACGGAGGGGGCA
CTAGGCGGAGGGCAGTTCGCTTTCTTGGAGAAAAAGGAAGGAGTTGGGGA
GGGGGAGATTATCATGGTTCCCGATGCGACTAGTGAGACTGGCTTCAGCC
AGACCCAGGTGGCAGCAATGCAGAACATGGAAATGATAGTGAGTGAGAGG
GACGCGGAGATAACGCGGATCGCGGAGGGCATCGAGGAGCTGGCCCATGT
CATGAAGTCTCTGGCAGGCTTTGTGATAGACCAAGGGACGGTGCTGGACC
GCATCGATTACAACATGGACATGGCGGTTGAGCGGGTCACCCAAGGCGTC
CTGCAGCTGGAAACAGCCGAAAAGATCCAAAAGCAGAGAGGACCGATGAA
GTGCATCTTTGGCTTGGTCTTCCTTATTTTTGTGTTGTTAATACTCCAAG
TCGTAAAGCACGTCCCGAGACGGAGGCGGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|526818 >mRNA_3292-protein ID=mRNA_3292-protein|Name=jgi.p|Nanoce1779_2|526818|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MRELSMLHRKRLLVSFDDSAEAKKEREIQSLTDAITDRFRGAERQLTAVG
KQKGDESDSEIKVRRNLQKSLACKIQRLSHAFRSQQKDYLGKLRAQTEGA
LGGGQFAFLEKKEGVGEGEIIMVPDATSETGFSQTQVAAMQNMEMIVSER
DAEITRIAEGIEELAHVMKSLAGFVIDQGTVLDRIDYNMDMAVERVTQGV
LQLETAEKIQKQRGPMKCIFGLVFLIFVLLILQVVKHVPRRRR* back to topmRNA from alignment at scaffold_7:1123033..1124113- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3292 ID=mRNA_3292|Name=jgi.p|Nanoce1779_2|526818|organism=Nannochloropsis oceanica|type=mRNA|length=1081bp|location=Sequence derived from alignment at scaffold_7:1123033..1124113- (Nannochloropsis oceanica)
ATGCGGGAGCTTTCCATGCTGCACCGCAAGCGCTTATTGGTGTCCTTTGA
CGACTCTGCGGAAGCGAAAAAAGAGAGGGAGATACAATCGTTGACGGATG
CGATAACGGATCGGTTTCGAGGGGCCGAGAGACAGCTGACAGCCGTTGGG
AAGCAGAAAGGGGACGAGAGCGATTCGGAGGTGTGGAGAAAGGAGAGAGG
GAGAAAGGGAGAGAGCTAGGAGGTTTCTGCGCGTGATCAGCATTATCTCG
GGTCGCAAGAAGTGACACTACTGACCCTTGCTTCCCTTCCCTCTCTCTCT
CCCTCACTGCCCTCCCCTCCAGATAAAAGTCCGTCGTAACCTTCAAAAAT
CCCTCGCTTGCAAGATACAACGTCTCTCCCATGCCTTCCGCTCCCAACAA
AAAGATTACCTAGGCAAACTCCGAGCGCAGACGGAGGGGGCACTAGGCGG
AGGGCAGTTCGCTTTCTTGGAGAAAAAGGAAGGAGTTGGGGAGGGGGAGA
TTATCATGGTTCCCGATGCGACTAGTGAGACTGGCTTCAGCCAGACCCAG
GTGGCAGCAATGCAGAACATGGAAATGATAGTGAGTGAGAGGGACGCGGA
GATAACGCGGATCGCGGAGGGCATCGAGGAGCTGGCCCATGTCATGAAGT
CTCTGGCAGGCTTTGTGATAGACCAAGGGACGGTGCTGGACCGCATCGAT
TACAACATGGGTGCGTTTCGTTCGGAGTCCATGCCCTCCTCCTCTCCTTC
CTTCCCTCCCTCACTTCCATTCTTCTGTCCCTCTCCTTCCCTCCCCTTGG
GCTGGCGTTTGGTCGGCAAGTGGTGTTGATTGGGTTGCCTTCTGCCTCTC
CGCGCCGTGGCATTGCTCCCTTTATATTAATCCCCTCCCTCCCTCCCTCC
CTCCTTCACTTCCTCAGACATGGCGGTTGAGCGGGTCACCCAAGGCGTCC
TGCAGCTGGAAACAGCCGAAAAGATCCAAAAGCAGAGAGGACCGATGAAG
TGCATCTTTGGCTTGGTCTTCCTTATTTTTGTGTTGTTAATACTCCAAGT
CGTAAAGCACGTCCCGAGACGGAGGCGGTAG back to topCoding sequence (CDS) from alignment at scaffold_7:1123033..1124113- >mRNA_3292 ID=mRNA_3292|Name=jgi.p|Nanoce1779_2|526818|organism=Nannochloropsis oceanica|type=CDS|length=2196bp|location=Sequence derived from alignment at scaffold_7:1123033..1124113- (Nannochloropsis oceanica)
ACATGGCGGTTGAGCGGGTCACCCAAGGCGTCCTGCAGCTGGAAACAGCC
GAAAAGATCCAAAAGCAGAGAGGACCGATGAAGTGCATCTTTGGCTTGGT
CTTCCTTATTTTTGTGTTGTTAATACTCCAAGTCGTAAAGCACGTCCCGA
GACGGAGGCGGTAGATAAAAGTCCGTCGTAACCTTCAAAAATCCCTCGCT
TGCAAGATACAACGTCTCTCCCATGCCTTCCGCTCCCAACAAAAAGATTA
CCTAGGCAAACTCCGAGCGCAGACGGAGGGGGCACTAGGCGGAGGGCAGT
TCGCTTTCTTGGAGAAAAAGGAAGGAGTTGGGGAGGGGGAGATTATCATG
GTTCCCGATGCGACTAGTGAGACTGGCTTCAGCCAGACCCAGGTGGCAGC
AATGCAGAACATGGAAATGATAGTGAGTGAGAGGGACGCGGAGATAACGC
GGATCGCGGAGGGCATCGAGGAGCTGGCCCATGTCATGAAGTCTCTGGCA
GGCTTTGTGATAGACCAAGGGACGGTGCTGGACCGCATCGATTACAACAT
GGATGCGGGAGCTTTCCATGCTGCACCGCAAGCGCTTATTGGTGTCCTTT
GACGACTCTGCGGAAGCGAAAAAAGAGAGGGAGATACAATCGTTGACGGA
TGCGATAACGGATCGGTTTCGAGGGGCCGAGAGACAGCTGACAGCCGTTG
GGAAGCAGAAAGGGGACGAGAGCGATTCGGAGACATGGCGGTTGAGCGGG
TCACCCAAGGCGTCCTGCAGCTGGAAACAGCCGAAAAGATCCAAAAGCAG
AGAGGACCGATGAAGTGCATCTTTGGCTTGGTCTTCCTTATTTTTGTGTT
GTTAATACTCCAAGTCGTAAAGCACGTCCCGAGACGGAGGCGGTAGATAA
AAGTCCGTCGTAACCTTCAAAAATCCCTCGCTTGCAAGATACAACGTCTC
TCCCATGCCTTCCGCTCCCAACAAAAAGATTACCTAGGCAAACTCCGAGC
GCAGACGGAGGGGGCACTAGGCGGAGGGCAGTTCGCTTTCTTGGAGAAAA
AGGAAGGAGTTGGGGAGGGGGAGATTATCATGGTTCCCGATGCGACTAGT
GAGACTGGCTTCAGCCAGACCCAGGTGGCAGCAATGCAGAACATGGAAAT
GATAGTGAGTGAGAGGGACGCGGAGATAACGCGGATCGCGGAGGGCATCG
AGGAGCTGGCCCATGTCATGAAGTCTCTGGCAGGCTTTGTGATAGACCAA
GGGACGGTGCTGGACCGCATCGATTACAACATGGATGCGGGAGCTTTCCA
TGCTGCACCGCAAGCGCTTATTGGTGTCCTTTGACGACTCTGCGGAAGCG
AAAAAAGAGAGGGAGATACAATCGTTGACGGATGCGATAACGGATCGGTT
TCGAGGGGCCGAGAGACAGCTGACAGCCGTTGGGAAGCAGAAAGGGGACG
AGAGCGATTCGGAGACATGGCGGTTGAGCGGGTCACCCAAGGCGTCCTGC
AGCTGGAAACAGCCGAAAAGATCCAAAAGCAGAGAGGACCGATGAAGTGC
ATCTTTGGCTTGGTCTTCCTTATTTTTGTGTTGTTAATACTCCAAGTCGT
AAAGCACGTCCCGAGACGGAGGCGGTAGATAAAAGTCCGTCGTAACCTTC
AAAAATCCCTCGCTTGCAAGATACAACGTCTCTCCCATGCCTTCCGCTCC
CAACAAAAAGATTACCTAGGCAAACTCCGAGCGCAGACGGAGGGGGCACT
AGGCGGAGGGCAGTTCGCTTTCTTGGAGAAAAAGGAAGGAGTTGGGGAGG
GGGAGATTATCATGGTTCCCGATGCGACTAGTGAGACTGGCTTCAGCCAG
ACCCAGGTGGCAGCAATGCAGAACATGGAAATGATAGTGAGTGAGAGGGA
CGCGGAGATAACGCGGATCGCGGAGGGCATCGAGGAGCTGGCCCATGTCA
TGAAGTCTCTGGCAGGCTTTGTGATAGACCAAGGGACGGTGCTGGACCGC
ATCGATTACAACATGGATGCGGGAGCTTTCCATGCTGCACCGCAAGCGCT
TATTGGTGTCCTTTGACGACTCTGCGGAAGCGAAAAAAGAGAGGGAGATA
CAATCGTTGACGGATGCGATAACGGATCGGTTTCGAGGGGCCGAGAGACA
GCTGACAGCCGTTGGGAAGCAGAAAGGGGACGAGAGCGATTCGGAG back to top
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