jgi.p|Nanoce1779_2|629506, mRNA_3274 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629506
Unique NamemRNA_3274
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length4077
Alignment locationscaffold_7:1075944..1081158 +

Link to JBrowse

Properties
Property NameValue
TranscriptId629592
TrackFilteredModels2
ProteinId629506
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:1075944..1081158 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629506gene_3274Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629506mRNA_3274-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_3274CDS_3274Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_3274 ID=mRNA_3274|Name=jgi.p|Nanoce1779_2|629506|organism=Nannochloropsis oceanica|type=mRNA|length=4077bp
ACAGGAACTGGTGCCCGCAGGGGCTAGTGCGCTGCGTTCCAGGTTTTTAC
GCACTCGTCGTCTTCCCTCCTCCAGCGAGCCGCAGCGAAACCCGACTCCC
CCATCATCCTCAATTCGCAAATGATGTCGCCCGCTCCCATGCCCATAGCT
CCACCACCCCCACCACGCTCCTCACAGTCAATGGACGCCGCGGCGTTGGC
CGCGCGGGAGGAACTGCTACTCCAATGTGCCACAGAGCTTGAAAATCAAA
TTTCGACCTTGCTGCGCGAGCGGGAAGGCCTGCAAAATCAGCTTCGACGC
GCCCAAGACGAGGCCAGTAAAGCCAAGTCCATGGTCGCTGGCTTAAGGAG
GAGCCAAATGGCGGCGTCCACATCGTCGTTTGGTTCGAGCAGTGCCAGCA
GCGTGGGGGGTAGCCAACGGGAAGCTTTGTTGTTGACCTTGGAAAAGGAA
GTGCTTACCAAGAAGGATGAGGTGAGGGCGTTGCTCCGCGAGATCGAAGT
ACGAGAGCAGAATGCCTTAAGGCTGGAACACGGAGCCAAGGTGAGGGAAG
AGAGGGTGGAAGGAATGTTACAACACGCGCAAGAAAAAGTGGGAAGCTTG
CGGGAGAAAGAACAAGAGTTGGACGTGCGAGAGGAGCGCCTAGCCCGCAA
GCAAGCTGATTTGGAAATTCGCGTTGGGGATACCCGAGCAAGAGAGGAAG
CGGCTACCATCCAGACAGGCGAGCTGGAGGCAAGGAGTACAATTGTGAGG
GAAAGGGAGGAGGAGTTGAGGGAACGGGAAGGGAAAGTGGAGGAGGAGGA
GGCACGGTTGGCGGCGAAGGAGAGGGAATTCGAGCAGATGGATTTTATAC
TTGAGGGACTGAAGAAGGAAAGGTTGGAGGTGGATGAGCGGGTTAGGGAA
ATGACGAAAAAGGAGGAGGCGCTGCAAGCGGAGCAGGGGGAATTGCTTGA
GAGAAGGAGGGAATTGAACGAATGGGAGGGGAGGGTGAGGGGGAGGGAGG
GGGAGATGGAGGAAGCGGAGAGGGAAATGGTGGAATCGAGGAGGGAGAGG
GCCAGGAGGGAGGAGGAGGCTGCTTCGATGCTGGTTCAGGCGAAAGAGGC
GGTTTTGCAGCGGGAGAGGGAGGCTCAGGTGGTGGTGGCGGAGGCGGAGA
GGAGGGTGAATGTCCTGGAGGGAAGGAGGGAGAGCTTGATGCGAGAAGTG
GCGGGATTGGAGGAGGAGGAGGCGAAAGGACGACGGGCGATGGAGGAGAG
GTTGAGGGAGGGAGAGCAAGCCTGGGAGAGTGTACAGGGGGATGTGCAGG
TGCTACGGACGGAGGTGGAGGAGAAGAGTAGGAAGCTTGCGGAGATGAAG
TCGGAAATGAGAGAGATGGAGGGGAGGGCGGGAAGGGCGGAGAGGCAGGT
GCATGAGAGACGACGGGAATTGAGGGAGTTGGATTCGAAGCTGGAGAGGG
CTAGGGGAGAAATGGAAGGGGTGGCTCTGCAGACGCGGGGCTTGCATCGG
GAGATCGAGAAGGAGAAGGAGGTGTTTGAGGAGTACGTCGGAGAGATGAG
TGAGGAGGTGGAGAAGATGAAGAGGGAGGCCTTGGAAGAAGTCAGGGTGC
AGGGGGAAGCAGTAGAGGCAGAGGCGAAGAAGTGGAAGGAGGAGTGGAAG
GTGCAGAGGGCTCTGCTGGAGCAGCAGCGGAAGGAGCTTGAGGAGAAAAG
AGAGGAGGTGGAGGGGAGGAGGAGGATGGTGGAGGAAGGATTGCTGGCCG
ATAAGCGGCGTTTGGGGAAGGAGAGGGCGGCGCTGGAGAAGGAGGCGGAG
GGAGTGAGGATGATGAAAAGAGAGTGGGAGATAGAGGTGGCGGGAATCAG
AAGGACGCTGGCGGAGGAGGTGGAGGCTTGGGAGGAGAGGAGAAGGGAGG
AAGAGCGTGCGTTGGCGGCCAGGAAGGAGGAGGAGGAGAGGGTGTTGGGG
GCGTTGAGGAGGGAGGTGGAGGGGGCGGCAAGAGGGCAGGACCTACGGTT
GAGAGAAAAAGAGGGGAGGCTGCGGGAGAAGGTGGAGGAGCAACAGCGGG
TGCAGTCGGCGCTGGAGAAGCTGGAGGGGGACTTAGAGAGGGAGCGAAAA
GCTTTGGAGGGAGGGAGGGAGGGAGTGAGGGCGGAGAAGGAGGGGCTGCA
GAGGCTGGCCCGCGAGCTGGAAAGAGCGGAGGCGGCACTTGAGAAGGAGA
GGACGGAGATGCTGCTGGGCTTTAATGAGGTGAAGGAGGAGGTGAGTGTC
ACGGCGGCAGCCAACGCGGAGACTACCCGGAGTTTGGCGAAGCAACGGAA
GGAGATGGAGGATTGGAAGGAGGGCTTAGCCAAGCGTGAGGCGGCGGTGG
AACGCCTCGAGGGGGAGTTGAAGAGGGAGCGGGCGACGGTGCTAGAGGGA
ATGGAGGCCGTGAAGGCGGCTAAGAGGGAGGTGGAGGAGGAGAAGGAGGT
GTGTGGGCAGGACCGGGTGTTGCTTGAGGCGAAGAGGGTGGAGGCCGAAG
CCAAGCGACTGCGGGCCGAGGAGAGGTTGGATTGGGCGGAGCGACAGGTG
GGGGAGGCGGAGAGGAAGGTGAAGGAGGCAATGAAGAAAGAGAGGGAGGT
AAGGGAGCTGGTGGAGAAGTATGAGGATTTTTCGAGGGAGTTGGAGGAGG
GACGGAGGGAGGCGAGGGAGGGGAGGAGGAAAGTGGAGGAATATAAATGC
GCCCTGGAGGAAGCAGAGAAACGGGCTCTGCAGCTGCAAGGGGAGGGAGC
TAGATGGAAGGAGCGGTTGACGACTATGGAGGTGATCTTGGAGGAGAGGC
AGAAGGCGCTTGACGAGGCTCTGAAAAGGGAGGGGGAGGCGAGAAGGAGG
GCAAGGACGATAGAGGAAAGCGAGCGGGTGGCATTGGAAGAGGCGAGGGA
GGAAGTAGAACGGAGAGAGGAGCAGGTGCGGGCACGTGCGTTGGAGCTGG
AATGCCTCGCGGATAATGTGGCGCGAAGGGACGCCATTCTTTTGAGCCTC
GAGGAGGGCTTTTTCCAGCAGCAGGCAGGGAGGGAGGGAGCGAGGGAGGT
GAGACTACGGTTGGATCAGGCGGGGAATCTGTCGAGGGCCTTTGAGAAGG
AGAGATTGGAGGTGGAGGAGAGGAGGGGGAAGCTCGTGCAAGCGAAAGTG
GTGCTGGACAAAAAACGGTTGAAGTTAGAAGGGGAGCGGGTAGTGCTCGA
GGGGAGGGCGACGCGATTACTGGAGCAGGAGGAGGAGGTGAGAGCGGAAG
CGATGCGGGTGCAACGGTGGAAGGAGGCACTGGAAGAGGAGGAGGAGGGA
TTGGAGAGGAGAAGGAAGGAGTTGGAGGGATGGAGGGAGGAGGTGAAGGG
GGAGATGGAGCGGATGAGGGGGGAGATCGGGGAGATGTATCGGAAGGCGA
AGAAAAAGGAGGAAGACACGGAGGAGTTGAGAAGACAGTTGATTGCGTCA
GCAGAGGCAGCAGCAGGAAGGGTGAGGGAGCTGGAGGAGGCGAGGGTATG
GATCGAGGAGGAGCGAGTGAAGCTTCAGGCGAAGATCAAGCATGTGGCGC
TTGTGGAGAAGACGGAGTTGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAA
GAGGGGAAAAAGACAATATGGAAGAAGAAGAAGAAGAAGAAGGAAGAAAA
GAAGGAGGAAGGGATAGAGAAGAAAGAGCAAGAATGACAGCACCAGCAAA
AGGTGAGGAAGAAGTAGAGACGAGCTTCCATGCGCTTGCCTCGCTCTCTC
CCCCTTCAACAATTCCTCAGAACCATTGTGGTGACACCCCCATGTCGGTT
TCATCTTCCTCCTCTCCCTCTTCCTCCTCCGCTTCCTCGTCCTTGCTCTT
TGCAGGGGTAAAGGGTGAGGAGGCAGAGGAGGGGGAGGCAGAGCCAGAGG
GGGATGAAGAGCAGGATCTCAGCGGCACTAACGAGGAGGAAAATGACAAG
TACCTCGATTTTAAAGCAGAGGGTGAGGGAGGAGGCGGAGCAGGCAGAGG
AGAGGGACAAGGAGGAGGAAGAAGAGGTGAGGGAGATGAGTTTCATTTTC
ACAATTTTTCATGTAGAGAGGAGGAGG
back to top

protein sequence of jgi.p|Nanoce1779_2|629506

>mRNA_3274-protein ID=mRNA_3274-protein|Name=jgi.p|Nanoce1779_2|629506|organism=Nannochloropsis oceanica|type=polypeptide|length=1189bp
MMSPAPMPIAPPPPPRSSQSMDAAALAAREELLLQCATELENQISTLLRE
REGLQNQLRRAQDEASKAKSMVAGLRRSQMAASTSSFGSSSASSVGGSQR
EALLLTLEKEVLTKKDEVRALLREIEVREQNALRLEHGAKVREERVEGML
QHAQEKVGSLREKEQELDVREERLARKQADLEIRVGDTRAREEAATIQTG
ELEARSTIVREREEELREREGKVEEEEARLAAKEREFEQMDFILEGLKKE
RLEVDERVREMTKKEEALQAEQGELLERRRELNEWEGRVRGREGEMEEAE
REMVESRRERARREEEAASMLVQAKEAVLQREREAQVVVAEAERRVNVLE
GRRESLMREVAGLEEEEAKGRRAMEERLREGEQAWESVQGDVQVLRTEVE
EKSRKLAEMKSEMREMEGRAGRAERQVHERRRELRELDSKLERARGEMEG
VALQTRGLHREIEKEKEVFEEYVGEMSEEVEKMKREALEEVRVQGEAVEA
EAKKWKEEWKVQRALLEQQRKELEEKREEVEGRRRMVEEGLLADKRRLGK
ERAALEKEAEGVRMMKREWEIEVAGIRRTLAEEVEAWEERRREEERALAA
RKEEEERVLGALRREVEGAARGQDLRLREKEGRLREKVEEQQRVQSALEK
LEGDLERERKALEGGREGVRAEKEGLQRLARELERAEAALEKERTEMLLG
FNEVKEEVSVTAAANAETTRSLAKQRKEMEDWKEGLAKREAAVERLEGEL
KRERATVLEGMEAVKAAKREVEEEKEVCGQDRVLLEAKRVEAEAKRLRAE
ERLDWAERQVGEAERKVKEAMKKEREVRELVEKYEDFSRELEEGRREARE
GRRKVEEYKCALEEAEKRALQLQGEGARWKERLTTMEVILEERQKALDEA
LKREGEARRRARTIEESERVALEEAREEVERREEQVRARALELECLADNV
ARRDAILLSLEEGFFQQQAGREGAREVRLRLDQAGNLSRAFEKERLEVEE
RRGKLVQAKVVLDKKRLKLEGERVVLEGRATRLLEQEEEVRAEAMRVQRW
KEALEEEEEGLERRRKELEGWREEVKGEMERMRGEIGEMYRKAKKKEEDT
EELRRQLIASAEAAAGRVRELEEARVWIEEERVKLQAKIKHVALVEKTEL
EEEEEEEEREEGKKTIWKKKKKKKEEKKEEGIEKKEQE*
back to top

mRNA from alignment at scaffold_7:1075944..1081158+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3274 ID=mRNA_3274|Name=jgi.p|Nanoce1779_2|629506|organism=Nannochloropsis oceanica|type=mRNA|length=5215bp|location=Sequence derived from alignment at scaffold_7:1075944..1081158+ (Nannochloropsis oceanica)
ACAGGAACTGGTGCCCGCAGGGGCTAGTGCGCTGCGTTCCAGGTTTTTAC GCACTCGTCGTCTTCCCTCCTCCAGCGAGCCGCAGCGAAACCCGACTCCC CCATCATCCTCAATTCGCAAATGATGTCGCCCGCTCCCATGCCCATAGCT CCACCACCCCCACCACGCTCCTCACAGTCAATGGACGCCGCGGCGTTGGC CGCGCGGGAGGAACTGCTACTCCAATGTGCCACAGAGCTTGAAAATCAAA TTTCGACCTTGCTGCGCGAGCGGGAAGGCCTGCAAAATCAGCTTCGACGC GCCCAAGACGAGGCCAGTAAAGCCAAGTCCATGGTCGCTGGCTTAAGGAG GAGCCAAATGGCGGCGTCCACATCGTCGTTTGGTTCGAGCAGTGCCAGCA GCGTGGGGGGTAGCCAACGGGAAGCTTTGTTGTTGACCTTGGAAAAGGAA GTGCTTACCAAGAAGGATGAGGTGAGGGCGTTGCTCCGCGAGATCGAAGT ACGAGAGCAGAATGCCTTAAGGCTGGAACACGGAGCCAAGGTGAGGGAAG AGAGGGTGGAAGGAATGTTACAACACGCGCAAGAAAAAGTGGGAAGCTTG CGGGAGAAAGAACAAGAGTTGGACGTGCGAGAGGAGCGCCTAGCCCGCAA GCAAGCTGATTTGGAAATTCGCGTTGGGGATACCCGAGCAAGAGAGGAAG CGGCTACCATCCAGACAGGCGAGCTGGAGGCAAGGAGTACAATTGTGAGG GAAAGGGAGGAGGAGTTGAGGGAACGGGAAGGGAAAGTGGAGGAGGAGGA GGCACGGTTGGCGGCGAAGGAGAGGGAATTCGAGCAGATGGATTTTATAC TTGAGGGACTGAAGAAGGAAAGGTTGGAGGTGGATGAGCGGGTTAGGGAA ATGACGAAAAAGGAGGAGGCGCTGCAAGCGGAGCAGGGGGAATTGCTTGA GAGAAGGAGGGAATTGAACGAATGGGAGGGGAGGGTGAGGGGGAGGGAGG GGGAGATGGAGGAAGCGGAGAGGGAAATGGTGGAATCGAGGAGGGAGAGG GCCAGGAGGGAGGAGGAGGCTGCTTCGATGCTGGTTCAGGCGAAAGAGGC GGTTTTGCAGCGGGAGAGGGAGGCTCAGGTGGTGGTGGCGGAGGCGGAGA GGAGGGTGAATGTCCTGGAGGGAAGGAGGGAGAGCTTGATGCGAGAAGTG GCGGGATTGGAGGAGGAGGAGGCGAAAGGACGACGGGCGATGGAGGAGAG GTTGAGGGAGGGAGAGCAAGCCTGGGAGAGTGTACAGGGGGATGTGCAGG TGCTACGGACGGAGGTGGAGGAGAAGAGTAGGAAGCTTGCGGAGATGAAG TCGGAAATGAGAGAGATGGAGGGGAGGGCGGGAAGGGCGGAGAGGCAGGT GCATGAGAGACGACGGGAATTGAGGGAGTTGGATTCGAAGCTGGAGAGGG CTAGGGGAGAAATGGAAGGGGTGGCTCTGCAGACGCGGGGCTTGCATCGG GAGATCGAGAAGGAGAAGGAGGTGTTTGAGGAGTACGTCGGAGAGATGAG TGAGGAGGTGGAGAAGATGAAGAGGGAGGCCTTGGAAGAAGTCAGGGTGC AGGGGGAAGCAGTAGAGGCAGAGGCGAAGAAGTGGAAGGAGGAGTGGAAG GTGCAGAGGGCTCTGCTGGAGCAGCAGCGGAAGGAGCTTGAGGAGAAAAG AGAGGAGGTGGAGGGGAGGAGGAGGATGGTGGAGGAAGGATTGCTGGCCG ATAAGCGGCGTTTGGGGAAGGAGAGGGCGGCGCTGGAGAAGGAGGCGGAG GGAGTGAGGATGATGAAAAGAGAGTGGGAGATAGAGGTGGCGGGAATCAG AAGGACGCTGGCGGAGGAGGTGGAGGCTTGGGAGGAGAGGAGAAGGGAGG AAGAGCGTGCGTTGGCGGCCAGGAAGGAGGAGGAGGAGAGGGTGTTGGGG GCGTTGAGGAGGGAGGTGGAGGGGGCGGCAAGAGGGCAGGACCTACGGTT GAGAGAAAAAGAGGGGAGGCTGCGGGAGAAGGTGGAGGAGCAACAGCGGG TGCAGTCGGCGCTGGAGAAGCTGGAGGGGGACTTAGAGAGGGAGCGAAAA GCTTTGGAGGGAGGGAGGGAGGGAGTGAGGGCGGAGAAGGAGGGGCTGCA GAGGCTGGCCCGCGAGCTGGAAAGAGCGGAGGCGGCACTTGAGAAGGAGA GGACGGAGATGCTGCTGGGCTTTAATGAGGTGAAGGAGGAGGTGAGTGTC ACGGCGGCAGCCAACGCGGAGACTACCCGGAGTTTGGCGAAGCAACGGAA GGAGATGGAGGATTGGAAGGAGGGCTTAGCCAAGCGTGAGGCGGCGGTGG AACGCCTCGAGGGGGAGTTGAAGAGGGAGCGGGCGACGGTGCTAGAGGGA ATGGAGGCCGTGAAGGCGGCTAAGAGGGAGGTGGAGGAGGAGAAGGAGGT GTGTGGGCAGGACCGGGTGTTGCTTGAGGCGAAGAGGGTGGAGGCCGAAG CCAAGCGACTGCGGGCCGAGGAGAGGTTGGATTGGGCGGAGCGACAGGTG GGGGAGGCGGAGAGGAAGGTGAAGGAGGCAATGAAGAAAGAGAGGGAGGT AAGGGAGCTGGTGGAGAAGTATGAGGATTTTTCGAGGGAGTTGGAGGAGG GACGGAGGGAGGCGAGGGAGGGGAGGAGGAAAGTGGAGGAATATAAATGC GCCCTGGAGGAAGCAGAGAAACGGGCTCTGCAGCTGCAAGGGGAGGGAGC TAGATGGAAGGAGCGGTTGACGACTATGGAGGTGATCTTGGAGGAGAGGC AGAAGGCGCTTGACGAGGCTCTGAAAAGGGAGGGGGAGGCGAGAAGGAGG GCAAGGACGATAGAGGAAAGCGAGCGGGTGGCATTGGAAGAGGCGAGGGA GGAAGTAGAACGGAGAGAGGAGCAGGTGCGGGCACGTGCGTTGGAGCTGG AATGCCTCGCGGATAATGTGGCGCGAAGGGACGCCATTCTTTTGAGCCTC GAGGAGGGCTTTTTCCAGCAGCAGGCAGGGAGGGAGGGAGCGAGGGAGGT GAGACTACGGTTGGATCAGGCGGGGAATCTGTCGAGGGCCTTTGAGAAGG AGAGATTGGAGGTGGAGGAGAGGAGGGGGAAGCTCGTGCAAGCGAAAGTG GTGCTGGACAAAAAACGGTTGAAGTTAGAAGGGGAGCGGGTAGTGCTCGA GGGGAGGGCGACGCGATTACTGGAGCAGGAGGAGGAGGTGAGAGCGGAAG CGATGCGGGTGCAACGGTGGAAGGAGGCACTGGAAGAGGAGGAGGAGGGA TTGGAGAGGAGAAGGAAGGAGTTGGAGGGATGGAGGGAGGAGGTGAAGGG GGAGATGGAGCGGATGAGGGGGGAGATCGGGGAGATGTATCGGAAGGCGA AGAAAAAGGAGGAAGACACGGAGGAGTTGAGAAGACAGTTGATTGCGTCA GCAGAGGCAGCAGCAGGAAGGGTGAGGGAGCTGGAGGAGGCGAGGGTATG GATCGAGGAGGAGCGAGTGAAGCTTCAGGCGAAGATCAAGCATGTGGCGC TTGTGGAGAAGACGGTGTTGCAGCAGATGCAGGAGGTGGAGGCGGCGTGG GAACGGGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGG AGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAG CAGGAGCAGGAGCAGGAGGAGGGGGAGAAGGAGGAGGAGGAGGAATGCGA AGAGGAGTTGGAGAAGGAGCGAGAGGAACAGCGAGGACGAGGGGGAGGTG GAGGAAGAGGGGAGGGGACAGGAGAGGAAAAGAATATCACTCCCAGGATG CGAGCGGCGGCGGCCCTTGTCGCCCCAGGGGCCGAAGTGGCAGCGGAGGA AGCAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAGCAGCAACAG CAGCAACAGCGGCAACAGCGGCAACAGCAGCAACAGCAGCAACAGCGGCA ACAGCAGCAACTCCGGCTGCTTCGGCAGCTGCAGTGACAACGGGTGGGAT AGAACCTCCATCCGCCACTGGCACTGCTCTTGCCGCTGCCGCTGCGGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTTCTCCTCCTCATCCTCCATCCCCT CCTTCTCCCCGTTTTCCTCTTCCTCGTTCTTCTACTCCCCATACACAACA ATCCTACCTCGCATTCCCCCCTCCTTCCTCCCTCGCCCCTGCAGTCGATG CTACGACGGCTCCTCCCCCTCTCTCCTCCCCCTCCTTTTCCTGCCTCCAA TCAGAGGAGGGAGGTAGAGAGGAAGGGATAGAGGAGGGGTTTGGTGATGT GACTTTAGACTCGATTCGAAGACGTTTTTCTGTTGCTATGGACAGTCTGA ATACGTCAGTGCACGAAAGAGATGAGATGGTGTTTGGGATCGGGAGGAAG GAAGGGAGGGAGGGGAGGAGGGAGGGAGGGGAGGAGGGGGGAAGTCTGGG GTTACTGGAAGAGGACTTGTCGTCGGTGGAGGGGGGGAAGGAGGAGGAGG AGGAGGAAGGAGCGACAGGGAAGGAGGTGTTTTTACCTACAACTTCGCCG AAGAAGAAGCGGAGCAGGCAATCGTCTGAAACGACTGGTGACACCGTGGC AGGAGTTGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAGGGGAAAAAG ACAATATGGAAGAAGAAGAAGAAGAAGAAGGAAGAAAAGAAGGAGGAAGG GATAGAGAAGAAAGAGCAAGAATGACAGCACCAGCAAAAGGTGAGGAAGA AGTAGAGACGAGCTTCCATGCGCTTGCCTCGCTCTCTCCCCCTTCAACAA TTCCTCAGAACCATTGTGGTGACACCCCCATGTCGGTTTCATCTTCCTCC TCTCCCTCTTCCTCCTCCGCTTCCTCGTCCTTGCTCTTTGCAGGGGTAAA GGGTGAGGAGGCAGAGGAGGGGGAGGCAGAGCCAGAGGGGGATGAAGAGC AGGATCTCAGCGGCACTAACGAGGAGGAAAATGACAAGTACCTCGATTTT AAAGCAGAGGGTGAGGGAGGAGGCGGAGCAGGCAGAGGAGAGGGACAAGG AGGAGGAAGAAGAGGTGAGGGAGATGAGTTTCATTTTCACAATTTTTCAT GTAGAGAGGAGGAGG
back to top

Coding sequence (CDS) from alignment at scaffold_7:1075944..1081158+

>mRNA_3274 ID=mRNA_3274|Name=jgi.p|Nanoce1779_2|629506|organism=Nannochloropsis oceanica|type=CDS|length=7134bp|location=Sequence derived from alignment at scaffold_7:1075944..1081158+ (Nannochloropsis oceanica)
ATGATGTCGCCCGCTCCCATGCCCATAGCTCCACCACCCCCACCACGCTC
CTCACAGTCAATGGACGCCGCGGCGTTGGCCGCGCGGGAGGAACTGCTAC
TCCAATGTGCCACAGAGCTTGAAAATCAAATTTCGACCTTGCTGCGCGAG
CGGGAAGGCCTGCAAAATCAGCTTCGACGCGCCCAAGACGAGGCCAGTAA
AGCCAAGTCCATGGTCGCTGGCTTAAGGAGGAGCCAAATGGCGGCGTCCA
CATCGTCGTTTGGTTCGAGCAGTGCCAGCAGCGTGGGGGGTAGCCAACGG
GAAGCTTTGTTGTTGACCTTGGAAAAGGAAGTGCTTACCAAGAAGGATGA
GGTGAGGGCGTTGCTCCGCGAGATCGAAGTACGAGAGCAGAATGCCTTAA
GGCTGGAACACGGAGCCAAGGTGAGGGAAGAGAGGGTGGAAGGAATGTTA
CAACACGCGCAAGAAAAAGTGGGAAGCTTGCGGGAGAAAGAACAAGAGTT
GGACGTGCGAGAGGAGCGCCTAGCCCGCAAGCAAGCTGATTTGGAAATTC
GCGTTGGGGATACCCGAGCAAGAGAGGAAGCGGCTACCATCCAGACAGGC
GAGCTGGAGGCAAGGAGTACAATTGTGAGGGAAAGGGAGGAGGAGTTGAG
GGAACGGGAAGGGAAAGTGGAGGAGGAGGAGGCACGGTTGGCGGCGAAGG
AGAGGGAATTCGAGCAGATGGATTTTATACTTGAGGGACTGAAGAAGGAA
AGGTTGGAGGTGGATGAGCGGGTTAGGGAAATGACGAAAAAGGAGGAGGC
GCTGCAAGCGGAGCAGGGGGAATTGCTTGAGAGAAGGAGGGAATTGAACG
AATGGGAGGGGAGGGTGAGGGGGAGGGAGGGGGAGATGGAGGAAGCGGAG
AGGGAAATGGTGGAATCGAGGAGGGAGAGGGCCAGGAGGGAGGAGGAGGC
TGCTTCGATGCTGGTTCAGGCGAAAGAGGCGGTTTTGCAGCGGGAGAGGG
AGGCTCAGGTGGTGGTGGCGGAGGCGGAGAGGAGGGTGAATGTCCTGGAG
GGAAGGAGGGAGAGCTTGATGCGAGAAGTGGCGGGATTGGAGGAGGAGGA
GGCGAAAGGACGACGGGCGATGGAGGAGAGGTTGAGGGAGGGAGAGCAAG
CCTGGGAGAGTGTACAGGGGGATGTGCAGGTGCTACGGACGGAGGTGGAG
GAGAAGAGTAGGAAGCTTGCGGAGATGAAGTCGGAAATGAGAGAGATGGA
GGGGAGGGCGGGAAGGGCGGAGAGGCAGGTGCATGAGAGACGACGGGAAT
TGAGGGAGTTGGATTCGAAGCTGGAGAGGGCTAGGGGAGAAATGGAAGGG
GTGGCTCTGCAGACGCGGGGCTTGCATCGGGAGATCGAGAAGGAGAAGGA
GGTGTTTGAGGAGTACGTCGGAGAGATGAGTGAGGAGGTGGAGAAGATGA
AGAGGGAGGCCTTGGAAGAAGTCAGGGTGCAGGGGGAAGCAGTAGAGGCA
GAGGCGAAGAAGTGGAAGGAGGAGTGGAAGGTGCAGAGGGCTCTGCTGGA
GCAGCAGCGGAAGGAGCTTGAGGAGAAAAGAGAGGAGGTGGAGGGGAGGA
GGAGGATGGTGGAGGAAGGATTGCTGGCCGATAAGCGGCGTTTGGGGAAG
GAGAGGGCGGCGCTGGAGAAGGAGGCGGAGGGAGTGAGGATGATGAAAAG
AGAGTGGGAGATAGAGGTGGCGGGAATCAGAAGGACGCTGGCGGAGGAGG
TGGAGGCTTGGGAGGAGAGGAGAAGGGAGGAAGAGCGTGCGTTGGCGGCC
AGGAAGGAGGAGGAGGAGAGGGTGTTGGGGGCGTTGAGGAGGGAGGTGGA
GGGGGCGGCAAGAGGGCAGGACCTACGGTTGAGAGAAAAAGAGGGGAGGC
TGCGGGAGAAGGTGGAGGAGCAACAGCGGGTGCAGTCGGCGCTGGAGAAG
CTGGAGGGGGACTTAGAGAGGGAGCGAAAAGCTTTGGAGGGAGGGAGGGA
GGGAGTGAGGGCGGAGAAGGAGGGGCTGCAGAGGCTGGCCCGCGAGCTGG
AAAGAGCGGAGGCGGCACTTGAGAAGGAGAGGACGGAGATGCTGCTGGGC
TTTAATGAGGTGAAGGAGGAGGTGAGTGTCACGGCGGCAGCCAACGCGGA
GACTACCCGGAGTTTGGCGAAGCAACGGAAGGAGATGGAGGATTGGAAGG
AGGGCTTAGCCAAGCGTGAGGCGGCGGTGGAACGCCTCGAGGGGGAGTTG
AAGAGGGAGCGGGCGACGGTGCTAGAGGGAATGGAGGCCGTGAAGGCGGC
TAAGAGGGAGGTGGAGGAGGAGAAGGAGGTGTGTGGGCAGGACCGGGTGT
TGCTTGAGGCGAAGAGGGTGGAGGCCGAAGCCAAGCGACTGCGGGCCGAG
GAGAGGTTGGATTGGGCGGAGCGACAGGTGGGGGAGGCGGAGAGGAAGGT
GAAGGAGGCAATGAAGAAAGAGAGGGAGGTAAGGGAGCTGGTGGAGAAGT
ATGAGGATTTTTCGAGGGAGTTGGAGGAGGGACGGAGGGAGGCGAGGGAG
GGGAGGAGGAAAGTGGAGGAATATAAATGCGCCCTGGAGGAAGCAGAGAA
ACGGGCTCTGCAGCTGCAAGGGGAGGGAGCTAGATGGAAGGAGCGGTTGA
CGACTATGGAGGTGATCTTGGAGGAGAGGCAGAAGGCGCTTGACGAGGCT
CTGAAAAGGGAGGGGGAGGCGAGAAGGAGGGCAAGGACGATAGAGGAAAG
CGAGCGGGTGGCATTGGAAGAGGCGAGGGAGGAAGTAGAACGGAGAGAGG
AGCAGGTGCGGGCACGTGCGTTGGAGCTGGAATGCCTCGCGGATAATGTG
GCGCGAAGGGACGCCATTCTTTTGAGCCTCGAGGAGGGCTTTTTCCAGCA
GCAGGCAGGGAGGGAGGGAGCGAGGGAGGTGAGACTACGGTTGGATCAGG
CGGGGAATCTGTCGAGGGCCTTTGAGAAGGAGAGATTGGAGGTGGAGGAG
AGGAGGGGGAAGCTCGTGCAAGCGAAAGTGGTGCTGGACAAAAAACGGTT
GAAGTTAGAAGGGGAGCGGGTAGTGCTCGAGGGGAGGGCGACGCGATTAC
TGGAGCAGGAGGAGGAGGTGAGAGCGGAAGCGATGCGGGTGCAACGGTGG
AAGGAGGCACTGGAAGAGGAGGAGGAGGGATTGGAGAGGAGAAGGAAGGA
GTTGGAGGGATGGAGGGAGGAGGTGAAGGGGGAGATGGAGCGGATGAGGG
GGGAGATCGGGGAGATGTATCGGAAGGCGAAGAAAAAGGAGGAAGACACG
GAGGAGTTGAGAAGACAGTTGATTGCGTCAGCAGAGGCAGCAGCAGGAAG
GGTGAGGGAGCTGGAGGAGGCGAGGGTATGGATCGAGGAGGAGCGAGTGA
AGCTTCAGGCGAAGATCAAGCATGTGGCGCTTGTGGAGAAGACGGAGTTG
GAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAGGGGAAAAAGACAATATG
GAAGAAGAAGAAGAAGAAGAAGGAAGAAAAGAAGGAGGAAGGGATAGAGA
AGAAAGAGCAAGAATGAATGATGTCGCCCGCTCCCATGCCCATAGCTCCA
CCACCCCCACCACGCTCCTCACAGTCAATGGACGCCGCGGCGTTGGCCGC
GCGGGAGGAACTGCTACTCCAATGTGCCACAGAGCTTGAAAATCAAATTT
CGACCTTGCTGCGCGAGCGGGAAGGCCTGCAAAATCAGCTTCGACGCGCC
CAAGACGAGGCCAGTAAAGCCAAGTCCATGGTCGCTGGCTTAAGGAGGAG
CCAAATGGCGGCGTCCACATCGTCGTTTGGTTCGAGCAGTGCCAGCAGCG
TGGGGGGTAGCCAACGGGAAGCTTTGTTGTTGACCTTGGAAAAGGAAGTG
CTTACCAAGAAGGATGAGGTGAGGGCGTTGCTCCGCGAGATCGAAGTACG
AGAGCAGAATGCCTTAAGGCTGGAACACGGAGCCAAGGTGAGGGAAGAGA
GGGTGGAAGGAATGTTACAACACGCGCAAGAAAAAGTGGGAAGCTTGCGG
GAGAAAGAACAAGAGTTGGACGTGCGAGAGGAGCGCCTAGCCCGCAAGCA
AGCTGATTTGGAAATTCGCGTTGGGGATACCCGAGCAAGAGAGGAAGCGG
CTACCATCCAGACAGGCGAGCTGGAGGCAAGGAGTACAATTGTGAGGGAA
AGGGAGGAGGAGTTGAGGGAACGGGAAGGGAAAGTGGAGGAGGAGGAGGC
ACGGTTGGCGGCGAAGGAGAGGGAATTCGAGCAGATGGATTTTATACTTG
AGGGACTGAAGAAGGAAAGGTTGGAGGTGGATGAGCGGGTTAGGGAAATG
ACGAAAAAGGAGGAGGCGCTGCAAGCGGAGCAGGGGGAATTGCTTGAGAG
AAGGAGGGAATTGAACGAATGGGAGGGGAGGGTGAGGGGGAGGGAGGGGG
AGATGGAGGAAGCGGAGAGGGAAATGGTGGAATCGAGGAGGGAGAGGGCC
AGGAGGGAGGAGGAGGCTGCTTCGATGCTGGTTCAGGCGAAAGAGGCGGT
TTTGCAGCGGGAGAGGGAGGCTCAGGTGGTGGTGGCGGAGGCGGAGAGGA
GGGTGAATGTCCTGGAGGGAAGGAGGGAGAGCTTGATGCGAGAAGTGGCG
GGATTGGAGGAGGAGGAGGCGAAAGGACGACGGGCGATGGAGGAGAGGTT
GAGGGAGGGAGAGCAAGCCTGGGAGAGTGTACAGGGGGATGTGCAGGTGC
TACGGACGGAGGTGGAGGAGAAGAGTAGGAAGCTTGCGGAGATGAAGTCG
GAAATGAGAGAGATGGAGGGGAGGGCGGGAAGGGCGGAGAGGCAGGTGCA
TGAGAGACGACGGGAATTGAGGGAGTTGGATTCGAAGCTGGAGAGGGCTA
GGGGAGAAATGGAAGGGGTGGCTCTGCAGACGCGGGGCTTGCATCGGGAG
ATCGAGAAGGAGAAGGAGGTGTTTGAGGAGTACGTCGGAGAGATGAGTGA
GGAGGTGGAGAAGATGAAGAGGGAGGCCTTGGAAGAAGTCAGGGTGCAGG
GGGAAGCAGTAGAGGCAGAGGCGAAGAAGTGGAAGGAGGAGTGGAAGGTG
CAGAGGGCTCTGCTGGAGCAGCAGCGGAAGGAGCTTGAGGAGAAAAGAGA
GGAGGTGGAGGGGAGGAGGAGGATGGTGGAGGAAGGATTGCTGGCCGATA
AGCGGCGTTTGGGGAAGGAGAGGGCGGCGCTGGAGAAGGAGGCGGAGGGA
GTGAGGATGATGAAAAGAGAGTGGGAGATAGAGGTGGCGGGAATCAGAAG
GACGCTGGCGGAGGAGGTGGAGGCTTGGGAGGAGAGGAGAAGGGAGGAAG
AGCGTGCGTTGGCGGCCAGGAAGGAGGAGGAGGAGAGGGTGTTGGGGGCG
TTGAGGAGGGAGGTGGAGGGGGCGGCAAGAGGGCAGGACCTACGGTTGAG
AGAAAAAGAGGGGAGGCTGCGGGAGAAGGTGGAGGAGCAACAGCGGGTGC
AGTCGGCGCTGGAGAAGCTGGAGGGGGACTTAGAGAGGGAGCGAAAAGCT
TTGGAGGGAGGGAGGGAGGGAGTGAGGGCGGAGAAGGAGGGGCTGCAGAG
GCTGGCCCGCGAGCTGGAAAGAGCGGAGGCGGCACTTGAGAAGGAGAGGA
CGGAGATGCTGCTGGGCTTTAATGAGGTGAAGGAGGAGGTGAGTGTCACG
GCGGCAGCCAACGCGGAGACTACCCGGAGTTTGGCGAAGCAACGGAAGGA
GATGGAGGATTGGAAGGAGGGCTTAGCCAAGCGTGAGGCGGCGGTGGAAC
GCCTCGAGGGGGAGTTGAAGAGGGAGCGGGCGACGGTGCTAGAGGGAATG
GAGGCCGTGAAGGCGGCTAAGAGGGAGGTGGAGGAGGAGAAGGAGGTGTG
TGGGCAGGACCGGGTGTTGCTTGAGGCGAAGAGGGTGGAGGCCGAAGCCA
AGCGACTGCGGGCCGAGGAGAGGTTGGATTGGGCGGAGCGACAGGTGGGG
GAGGCGGAGAGGAAGGTGAAGGAGGCAATGAAGAAAGAGAGGGAGGTAAG
GGAGCTGGTGGAGAAGTATGAGGATTTTTCGAGGGAGTTGGAGGAGGGAC
GGAGGGAGGCGAGGGAGGGGAGGAGGAAAGTGGAGGAATATAAATGCGCC
CTGGAGGAAGCAGAGAAACGGGCTCTGCAGCTGCAAGGGGAGGGAGCTAG
ATGGAAGGAGCGGTTGACGACTATGGAGGTGATCTTGGAGGAGAGGCAGA
AGGCGCTTGACGAGGCTCTGAAAAGGGAGGGGGAGGCGAGAAGGAGGGCA
AGGACGATAGAGGAAAGCGAGCGGGTGGCATTGGAAGAGGCGAGGGAGGA
AGTAGAACGGAGAGAGGAGCAGGTGCGGGCACGTGCGTTGGAGCTGGAAT
GCCTCGCGGATAATGTGGCGCGAAGGGACGCCATTCTTTTGAGCCTCGAG
GAGGGCTTTTTCCAGCAGCAGGCAGGGAGGGAGGGAGCGAGGGAGGTGAG
ACTACGGTTGGATCAGGCGGGGAATCTGTCGAGGGCCTTTGAGAAGGAGA
GATTGGAGGTGGAGGAGAGGAGGGGGAAGCTCGTGCAAGCGAAAGTGGTG
CTGGACAAAAAACGGTTGAAGTTAGAAGGGGAGCGGGTAGTGCTCGAGGG
GAGGGCGACGCGATTACTGGAGCAGGAGGAGGAGGTGAGAGCGGAAGCGA
TGCGGGTGCAACGGTGGAAGGAGGCACTGGAAGAGGAGGAGGAGGGATTG
GAGAGGAGAAGGAAGGAGTTGGAGGGATGGAGGGAGGAGGTGAAGGGGGA
GATGGAGCGGATGAGGGGGGAGATCGGGGAGATGTATCGGAAGGCGAAGA
AAAAGGAGGAAGACACGGAGGAGTTGAGAAGACAGTTGATTGCGTCAGCA
GAGGCAGCAGCAGGAAGGGTGAGGGAGCTGGAGGAGGCGAGGGTATGGAT
CGAGGAGGAGCGAGTGAAGCTTCAGGCGAAGATCAAGCATGTGGCGCTTG
TGGAGAAGACGGAGTTGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAAGAG
GGGAAAAAGACAATATGGAAGAAGAAGAAGAAGAAGAAGGAAGAAAAGAA
GGAGGAAGGGATAGAGAAGAAAGAGCAAGAATGA
back to top
Synonyms
Publications