Properties
| Property Name | Value |
|---|
| TranscriptId | 585224 |
| Track | FilteredModels2 |
| ProteinId | 585138 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:1058096..1059563 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3266 ID=mRNA_3266|Name=jgi.p|Nanoce1779_2|585138|organism=Nannochloropsis oceanica|type=mRNA|length=1468bp
TGGGGGTGATGGACCCCGAGAAGGTTTACAAGAAACACCCGGGCCATGTG
TATGTGAAGGATGGTAGCGGGAAGGGCAAGGTGTGGGACGAGCGGAAGGC
GCTCCGGGCGACACGAAGGGTGGTGATCCGGGAGGAGCAGGTGGTGATGC
GACCCTTGGAGAACGAGGAGGAGGAGGGGGTCGCTTTGGAAGCTGGGCAT
GCTTTTAGGGTGTTGCAGGTGGCTCGGTCCGCGGATGATCGAGAGGCGCA
TGAACCGTCGTTGCTAGGATACCCGGGGTGGGTCGCAGGGCACATGTCCC
TGATGCCGAGGAAGGGTAAAGACCCCGAAAACGTTGGTCCGTGCTCTCAA
GTGTTCCATGTCTTGGATTGCGAGAAGAATTCGTTGGAGCTGGCGGTGGG
GGAGTTGGGGGAGGAGGCGTTCAGTGAAGGGATGGCGACGAGATTTCTTC
TGGGGAAGGGGGATACGTTCTACTTGCCGCCGATGAACGTGTACCGGTTG
TTCAATCATTCGAAGCGGGGGAAGGCCAGGGTGTTTTGGACGATCGTGAA
GCCCTGGAGCGTGGAGGAAGGGGAGGGAGGAAGGGGGGGAGGGGCCGATT
CCCAGAGTCAGAGTCAGGAGGTGATGCGGATGGAGGAGGAGGGAAAGAAG
GAGGTGCCTGCGCCAGTGGCGGTGAAGCGGGCGAGGAAATCGTCTGTGGC
ACCGACGCCGGTGGGAAAGAGGGAGAAGGGGAAGAGAGATTCCTCCATTG
CTACGGCGACCAAGTCGGGAAAGGGGGCAAGAAAGAGTAGTATGGCAGCA
TCGGCAGCGGCGGCAACGGCGGCAAGCGCAAGTGAGTGCGAAGAGGAGGA
AGAGGAAGAGGAGGAGGAAGTGGCAGAGCCGAGCGGGGAGGAGAGCGGAA
GTGAGCAGGGGGTGGAGGCAAGTGAGAGTGAGTCGTCGGACTCGGAGATG
TCAGAGTAAGGAGAAAGAGGTATAGGAGGCGAGGAATGCTAGCATTGCAA
GAAATTGCTGTCTTGTTTGTCCAATATATATTTATTTATTCTTCCCTGTC
GATCGAAATGCGTGAGTGATGGGGGAGAGGGGATTTCCTTTGTTGTAAGT
CAAGCGGAGGAAGAAGCGACGACGGGGGCAGGAGGACGATGAGAACGACT
TTTACACGAATGAGTGTGTGCGTATCGCTGGATTTCCCACCTTCGTTTCG
AAAGGGACACAGAATGCAGAAAGCGGAAATCGGAGAGGAAAAGAGAGGAG
GAAAAAAAAGATGAGCATGGACGGATATGAAAAACGGAGGGACATTAGAA
ATAAAAGAAAATGGCCAAGCTCAAAAAGAGGTCCAGCGACCGACGGGAAA
CGTCCACCAAGAAGAAGCAGCAGCAGCAGTGGCAGCAGCAGCAGCAGCAC
CAGCAGCAGCAGCACCACCACCACCTCGATCAACATTCACAGAGACGAGA
CTGAGACACCAAGAAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|585138 >mRNA_3266-protein ID=mRNA_3266-protein|Name=jgi.p|Nanoce1779_2|585138|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIREEQVVMRPL
ENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMP
RKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEEAFSEGMATRFLLGK
GDTFYLPPMNVYRLFNHSKRGKARVFWTIVKPWSVEEGEGGRGGGADSQS
QSQEVMRMEEEGKKEVPAPVAVKRARKSSVAPTPVGKREKGKRDSSIATA
TKSGKGARKSSMAASAAAATAASASECEEEEEEEEEEVAEPSGEESGSEQ
GVEASESESSDSEMSE* back to topmRNA from alignment at scaffold_7:1058096..1059563+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3266 ID=mRNA_3266|Name=jgi.p|Nanoce1779_2|585138|organism=Nannochloropsis oceanica|type=mRNA|length=1468bp|location=Sequence derived from alignment at scaffold_7:1058096..1059563+ (Nannochloropsis oceanica)
TGGGGGTGATGGACCCCGAGAAGGTTTACAAGAAACACCCGGGCCATGTG
TATGTGAAGGATGGTAGCGGGAAGGGCAAGGTGTGGGACGAGCGGAAGGC
GCTCCGGGCGACACGAAGGGTGGTGATCCGGGAGGAGCAGGTGGTGATGC
GACCCTTGGAGAACGAGGAGGAGGAGGGGGTCGCTTTGGAAGCTGGGCAT
GCTTTTAGGGTGTTGCAGGTGGCTCGGTCCGCGGATGATCGAGAGGCGCA
TGAACCGTCGTTGCTAGGATACCCGGGGTGGGTCGCAGGGCACATGTCCC
TGATGCCGAGGAAGGGTAAAGACCCCGAAAACGTTGGTCCGTGCTCTCAA
GTGTTCCATGTCTTGGATTGCGAGAAGAATTCGTTGGAGCTGGCGGTGGG
GGAGTTGGGGGAGGAGGCGTTCAGTGAAGGGATGGCGACGAGATTTCTTC
TGGGGAAGGGGGATACGTTCTACTTGCCGCCGATGAACGTGTACCGGTTG
TTCAATCATTCGAAGCGGGGGAAGGCCAGGGTGTTTTGGACGATCGTGAA
GCCCTGGAGCGTGGAGGAAGGGGAGGGAGGAAGGGGGGGAGGGGCCGATT
CCCAGAGTCAGAGTCAGGAGGTGATGCGGATGGAGGAGGAGGGAAAGAAG
GAGGTGCCTGCGCCAGTGGCGGTGAAGCGGGCGAGGAAATCGTCTGTGGC
ACCGACGCCGGTGGGAAAGAGGGAGAAGGGGAAGAGAGATTCCTCCATTG
CTACGGCGACCAAGTCGGGAAAGGGGGCAAGAAAGAGTAGTATGGCAGCA
TCGGCAGCGGCGGCAACGGCGGCAAGCGCAAGTGAGTGCGAAGAGGAGGA
AGAGGAAGAGGAGGAGGAAGTGGCAGAGCCGAGCGGGGAGGAGAGCGGAA
GTGAGCAGGGGGTGGAGGCAAGTGAGAGTGAGTCGTCGGACTCGGAGATG
TCAGAGTAAGGAGAAAGAGGTATAGGAGGCGAGGAATGCTAGCATTGCAA
GAAATTGCTGTCTTGTTTGTCCAATATATATTTATTTATTCTTCCCTGTC
GATCGAAATGCGTGAGTGATGGGGGAGAGGGGATTTCCTTTGTTGTAAGT
CAAGCGGAGGAAGAAGCGACGACGGGGGCAGGAGGACGATGAGAACGACT
TTTACACGAATGAGTGTGTGCGTATCGCTGGATTTCCCACCTTCGTTTCG
AAAGGGACACAGAATGCAGAAAGCGGAAATCGGAGAGGAAAAGAGAGGAG
GAAAAAAAAGATGAGCATGGACGGATATGAAAAACGGAGGGACATTAGAA
ATAAAAGAAAATGGCCAAGCTCAAAAAGAGGTCCAGCGACCGACGGGAAA
CGTCCACCAAGAAGAAGCAGCAGCAGCAGTGGCAGCAGCAGCAGCAGCAC
CAGCAGCAGCAGCACCACCACCACCTCGATCAACATTCACAGAGACGAGA
CTGAGACACCAAGAAGAG back to topCoding sequence (CDS) from alignment at scaffold_7:1058096..1059563+ >mRNA_3266 ID=mRNA_3266|Name=jgi.p|Nanoce1779_2|585138|organism=Nannochloropsis oceanica|type=CDS|length=951bp|location=Sequence derived from alignment at scaffold_7:1058096..1059563+ (Nannochloropsis oceanica)
ATGGACCCCGAGAAGGTTTACAAGAAACACCCGGGCCATGTGTATGTGAA
GGATGGTAGCGGGAAGGGCAAGGTGTGGGACGAGCGGAAGGCGCTCCGGG
CGACACGAAGGGTGGTGATCCGGGAGGAGCAGGTGGTGATGCGACCCTTG
GAGAACGAGGAGGAGGAGGGGGTCGCTTTGGAAGCTGGGCATGCTTTTAG
GGTGTTGCAGGTGGCTCGGTCCGCGGATGATCGAGAGGCGCATGAACCGT
CGTTGCTAGGATACCCGGGGTGGGTCGCAGGGCACATGTCCCTGATGCCG
AGGAAGGGTAAAGACCCCGAAAACGTTGGTCCGTGCTCTCAAGTGTTCCA
TGTCTTGGATTGCGAGAAGAATTCGTTGGAGCTGGCGGTGGGGGAGTTGG
GGGAGGAGGCGTTCAGTGAAGGGATGGCGACGAGATTTCTTCTGGGGAAG
GGGGATACGTTCTACTTGCCGCCGATGAACGTGTACCGGTTGTTCAATCA
TTCGAAGCGGGGGAAGGCCAGGGTGTTTTGGACGATCGTGAAGCCCTGGA
GCGTGGAGGAAGGGGAGGGAGGAAGGGGGGGAGGGGCCGATTCCCAGAGT
CAGAGTCAGGAGGTGATGCGGATGGAGGAGGAGGGAAAGAAGGAGGTGCC
TGCGCCAGTGGCGGTGAAGCGGGCGAGGAAATCGTCTGTGGCACCGACGC
CGGTGGGAAAGAGGGAGAAGGGGAAGAGAGATTCCTCCATTGCTACGGCG
ACCAAGTCGGGAAAGGGGGCAAGAAAGAGTAGTATGGCAGCATCGGCAGC
GGCGGCAACGGCGGCAAGCGCAAGTGAGTGCGAAGAGGAGGAAGAGGAAG
AGGAGGAGGAAGTGGCAGAGCCGAGCGGGGAGGAGAGCGGAAGTGAGCAG
GGGGTGGAGGCAAGTGAGAGTGAGTCGTCGGACTCGGAGATGTCAGAGTA
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