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Properties
| Property Name | Value |
|---|
| TranscriptId | 585140 |
| Track | FilteredModels2 |
| ProteinId | 585054 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:991035..993692 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3243 ID=mRNA_3243|Name=jgi.p|Nanoce1779_2|585054|organism=Nannochloropsis oceanica|type=mRNA|length=2385bp
ACAGGCACGCAACAGGAATCTGCACCCGAAAGCCCAGCTTCTTCCGGTAT
GTATGTCCTAGAACACAGCCAGCTCAACCCCAGCCTCCACAAGACGGGCT
CGGCCATTCTCGACCAAGAACAAGCCGTCCAAAAAAATTCCATGGGACAG
AACGAGGGCATGGGACAGTACGAGGCCACGGCTCAGCAGCACCAGTGCAC
CGAATTCCCTGCCGAGCGCAATTTCGTGAGGACCTTACGCCATGTTGCCG
ATGATGCGTCGCTCCTCGACCGGCACTATGCTCCTGCCTACCTCCGCCGC
GCGAGGGCCTATGAAGCGATGGGCAAGCTTGAACGTGCCCAAGAAGTAGC
CATGCAAGCCCTGTGCCTCCAACCACACAATGAGGAGGCCTTCCGAAAAG
TCCAATCTTTAACACGAGATATAGGTTTAACCGATTTTGGGGTTGGCCCA
TCCTCGGAGCAGTTGACAAAGGAGGGAGCGGGGGCCTTGGTGGGTTGGTC
GAAGGAAGAGCAGCCCGCGCATTGGTACCGGAAAGAGACTGTGGAGATGA
TGGAGAAATCATTGCCTTACACGGTGTTGCATGCATTGGAGCTGGCGATT
CACGCGCGTGTCTCACCCGAGGCAGTGCTGAAGAAGAAGACGAGGTTGTG
TATTCATCTCGCAGGCGCCTCATCGGAACTGGAGGGGTTTTCGGATTTTG
GCGTCCTTTTCGATAAATTGCCTCATTTGGAGGAGTTGCAAGTGGTACAA
ATCGGGTGGGTGGGATTGGTGGGGCCCTGTAAACGTTTCGTGTCTGACCC
GCAAGCCCCCCCTCCGGGATTGTTGGTGGGGGAAACGCGGCGCCTAGGGC
ATGGACGGCGCTTGCGGGTGCAACGATGGAGGGGGTTGTACCATGATTTT
TTGGCGAGGGCCTCCAAGCACGAATTTGATGGTCAGGGGTATTTGCACGA
GGCTCCGGATGTGGTGTTGCTTGCGAATCCGGGCTTGGATTTCTTCTTTG
ATTGCTGGGCGCCGACATTGGCATGTTTGCGAGATGCGGGTTATTTGACA
GTGTTGACGGGCGGGAACCTCGATCATTCTCGTAAGCACCATAATTTAAT
TCTGCAGGCAATGGGTGTCAAGTTTGCCTTACACCTACGGACGTCGAGGT
TTGGGATTGTCCATGGGCAGCGGGCTTGTAAGAACCATAATTTGTGCGCA
TTCTCAGGGGCGGCACCTTTGATGCCCGGGAGGGAACGACAACCGTCCAC
GGCGGAGGAATGTGGGGAGGTTAGGGCGTTGTTGCAGCGGTTGGGGTTGG
AAATGGAAACGGAGGGCAGGGCGACGATGCGCTTAGCGCTGTTGAACCAG
AAGGCGACCGCGAGGAATGTGGCGCAGATGGCCCTGGCGTCGTCGAAGAG
TTTGACACGGAGCTTTTGTGACGAGCCTGCCGCAGCTGCTGCCGCTGTTG
CTGCTGATGGTGGTGCTGGTGCTGTTGCTCCTATCGCTCCTGCCGCTGCC
CCTGTTGCTGCCGCAGCCGCTCTTGGTAAAGCAGGGGGAAGGAACAATCC
GGAGCTGGAGAAGAAACATAACAGCACCGGCAAAAGCATCATGTATAGGA
GGAAAAACAAGGAGCTGAGTTTGCCAAACGACAGTGAAGAGACTCAGGAG
GCGGCGGACGAGGCAGCCAATAACCGTCCGGACACACCGAGGCAATCGAC
GCCCACTGCTGCTGCTGCTGCTGTTGCTGCTGCTGGGAATCATGAATATA
TGAAAGGAGGGGTGACAACACAATCTCCGGGGCATGGGTGGTCTTGCCGG
AGCTTTCGCAAGGGCCAGAACGGAATTTATGCGGTAGAGAATGCTTGAGG
GGTGAAATGATGGAAAGAGGGAATATGGTCTGTACAATGCTGATCAGGAG
AAAAACAAGGAATTGCGGAGAATATGAGATCAATGGTGGTCAAGGTCTGG
GCCTTTGTCATCTTCGTTTCGACAACATTTCCACAAACAAAAACAAATAG
AGAAAGAGGAGTATAGTCGCATCACTCATTTCAGCCCTATACATTGAGAG
AGTTATACAGAAGAATTCCAGCTTATTTCAGCCCTTATCCTTCTCATTCG
AGGGAGGTAAAATGTACATGCCACGGGAGGATGTGAGAAATGGACATGCA
CATATGTCACTGTGACAGGACAGACGAAACTATTACGAGCAAGAAAATAA
AACGTCGAAGAAACGGATCGGTAAAAAGGCGACTGGATCGAGAGGATTAC
AAACTGGGGAAGAGGAAATCAAGAATGTGGCGTGTTGTTTATTACCGTTT
GTCCCCAACAGCAGCATCGTGAGAGAAGATTAATTATTCATGTTGAGCCA
TTTTCCACCACCATGGAAATAAGAAAGTCTGTAGT back to topprotein sequence of jgi.p|Nanoce1779_2|585054 >mRNA_3243-protein ID=mRNA_3243-protein|Name=jgi.p|Nanoce1779_2|585054|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MYVLEHSQLNPSLHKTGSAILDQEQAVQKNSMGQNEGMGQYEATAQQHQC
TEFPAERNFVRTLRHVADDASLLDRHYAPAYLRRARAYEAMGKLERAQEV
AMQALCLQPHNEEAFRKVQSLTRDIGLTDFGVGPSSEQLTKEGAGALVGW
SKEEQPAHWYRKETVEMMEKSLPYTVLHALELAIHARVSPEAVLKKKTRL
CIHLAGASSELEGFSDFGVLFDKLPHLEELQVVQIGWVGLVGPCKRFVSD
PQAPPPGLLVGETRRLGHGRRLRVQRWRGLYHDFLARASKHEFDGQGYLH
EAPDVVLLANPGLDFFFDCWAPTLACLRDAGYLTVLTGGNLDHSRKHHNL
ILQAMGVKFALHLRTSRFGIVHGQRACKNHNLCAFSGAAPLMPGRERQPS
TAEECGEVRALLQRLGLEMETEGRATMRLALLNQKATARNVAQMALASSK
SLTRSFCDEPAAAAAAVAADGGAGAVAPIAPAAAPVAAAAALGKAGGRNN
PELEKKHNSTGKSIMYRRKNKELSLPNDSEETQEAADEAANNRPDTPRQS
TPTAAAAAVAAAGNHEYMKGGVTTQSPGHGWSCRSFRKGQNGIYAVENA* back to topmRNA from alignment at scaffold_7:991035..993692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3243 ID=mRNA_3243|Name=jgi.p|Nanoce1779_2|585054|organism=Nannochloropsis oceanica|type=mRNA|length=2658bp|location=Sequence derived from alignment at scaffold_7:991035..993692- (Nannochloropsis oceanica)
ACAGGCACGCAACAGGAATCTGCACCCGAAAGCCCAGCTTCTTCCGGTAT
GTATGTCCTAGAACACAGCCAGCTCAACCCCAGCCTCCACAAGACGGGCT
CGGCCATTCTCGACCAAGAACAAGCCGTCCAAAAAAATTCCATGGGACAG
AACGAGGGCATGGGACAGTACGAGGCCACGGCTCAGCAGCACCAGGTACG
TGTGTGTAAGGCGCCTCCGGCCTTCAATATGCATCTGTTGTCATGGACGG
CCCTCAAACGGGCTGGTCGGAGTTCAAAGTATGGGTGTGAATTGGGAGGG
GACATGTCCAAGCTGTGCATTTCCCTGCCTCCTCCGCGTGCAAGTACTCT
TCTAGACCCCTGACTTTGCTTTGCCCGTGTATATGACCTATAACCTAAAT
CTCACTCATCTTTTCTGTTACGCCATCTCGCTCATGTTTTCGTCCCTACC
TCCACCCTCCTCCAAAAGTGCACCGAATTCCCTGCCGAGCGCAATTTCGT
GAGGACCTTACGCCATGTTGCCGATGATGCGTCGCTCCTCGACCGGCACT
ATGCTCCTGCCTACCTCCGCCGCGCGAGGGCCTATGAAGCGATGGGCAAG
CTTGAACGTGCCCAAGAAGTAGCCATGCAAGCCCTGTGCCTCCAACCACA
CAATGAGGAGGCCTTCCGAAAAGTCCAATCTTTAACACGAGATATAGGTT
TAACCGATTTTGGGGTTGGCCCATCCTCGGAGCAGTTGACAAAGGAGGGA
GCGGGGGCCTTGGTGGGTTGGTCGAAGGAAGAGCAGCCCGCGCATTGGTA
CCGGAAAGAGACTGTGGAGATGATGGAGAAATCATTGCCTTACACGGTGT
TGCATGCATTGGAGCTGGCGATTCACGCGCGTGTCTCACCCGAGGCAGTG
CTGAAGAAGAAGACGAGGTTGTGTATTCATCTCGCAGGCGCCTCATCGGA
ACTGGAGGGGTTTTCGGATTTTGGCGTCCTTTTCGATAAATTGCCTCATT
TGGAGGAGTTGCAAGTGGTACAAATCGGGTGGGTGGGATTGGTGGGGCCC
TGTAAACGTTTCGTGTCTGACCCGCAAGCCCCCCCTCCGGGATTGTTGGT
GGGGGAAACGCGGCGCCTAGGGCATGGACGGCGCTTGCGGGTGCAACGAT
GGAGGGGGTTGTACCATGATTTTTTGGCGAGGGCCTCCAAGCACGAATTT
GATGGTCAGGGGTATTTGCACGAGGCTCCGGATGTGGTGTTGCTTGCGAA
TCCGGGCTTGGATTTCTTCTTTGATTGCTGGGCGCCGACATTGGCATGTT
TGCGAGATGCGGGTTATTTGACAGTGTTGACGGGCGGGAACCTCGATCAT
TCTCGTAAGCACCATAATTTAATTCTGCAGGCAATGGGTGTCAAGTTTGC
CTTACACCTACGGACGTCGAGGTTTGGGATTGTCCATGGGCAGCGGGCTT
GTAAGAACCATAATTTGTGCGCATTCTCAGGGGCGGCACCTTTGATGCCC
GGGAGGGAACGACAACCGTCCACGGCGGAGGAATGTGGGGAGGTTAGGGC
GTTGTTGCAGCGGTTGGGGTTGGAAATGGAAACGGAGGGCAGGGCGACGA
TGCGCTTAGCGCTGTTGAACCAGAAGGCGACCGCGAGGAATGTGGCGCAG
ATGGCCCTGGCGTCGTCGAAGAGTTTGACACGGAGCTTTTGTGACGAGCC
TGCCGCAGCTGCTGCCGCTGTTGCTGCTGATGGTGGTGCTGGTGCTGTTG
CTCCTATCGCTCCTGCCGCTGCCCCTGTTGCTGCCGCAGCCGCTCTTGGT
AAAGCAGGGGGAAGGAACAATCCGGAGCTGGAGAAGAAACATAACAGCAC
CGGCAAAAGCATCATGTATAGGAGGAAAAACAAGGAGCTGAGTTTGCCAA
ACGACAGTGAAGAGACTCAGGAGGCGGCGGACGAGGCAGCCAATAACCGT
CCGGACACACCGAGGCAATCGACGCCCACTGCTGCTGCTGCTGCTGTTGC
TGCTGCTGGGAATCATGAATATATGAAAGGAGGGGTGACAACACAATCTC
CGGGGCATGGGTGGTCTTGCCGGAGCTTTCGCAAGGGCCAGAACGGAATT
TATGCGGTAGAGAATGCTTGAGGGGTGAAATGATGGAAAGAGGGAATATG
GTCTGTACAATGCTGATCAGGAGAAAAACAAGGAATTGCGGAGAATATGA
GATCAATGGTGGTCAAGGTCTGGGCCTTTGTCATCTTCGTTTCGACAACA
TTTCCACAAACAAAAACAAATAGAGAAAGAGGAGTATAGTCGCATCACTC
ATTTCAGCCCTATACATTGAGAGAGTTATACAGAAGAATTCCAGCTTATT
TCAGCCCTTATCCTTCTCATTCGAGGGAGGTAAAATGTACATGCCACGGG
AGGATGTGAGAAATGGACATGCACATATGTCACTGTGACAGGACAGACGA
AACTATTACGAGCAAGAAAATAAAACGTCGAAGAAACGGATCGGTAAAAA
GGCGACTGGATCGAGAGGATTACAAACTGGGGAAGAGGAAATCAAGAATG
TGGCGTGTTGTTTATTACCGTTTGTCCCCAACAGCAGCATCGTGAGAGAA
GATTAATTATTCATGTTGAGCCATTTTCCACCACCATGGAAATAAGAAAG
TCTGTAGT back to topCoding sequence (CDS) from alignment at scaffold_7:991035..993692- >mRNA_3243 ID=mRNA_3243|Name=jgi.p|Nanoce1779_2|585054|organism=Nannochloropsis oceanica|type=CDS|length=3600bp|location=Sequence derived from alignment at scaffold_7:991035..993692- (Nannochloropsis oceanica)
TGCACCGAATTCCCTGCCGAGCGCAATTTCGTGAGGACCTTACGCCATGT
TGCCGATGATGCGTCGCTCCTCGACCGGCACTATGCTCCTGCCTACCTCC
GCCGCGCGAGGGCCTATGAAGCGATGGGCAAGCTTGAACGTGCCCAAGAA
GTAGCCATGCAAGCCCTGTGCCTCCAACCACACAATGAGGAGGCCTTCCG
AAAAGTCCAATCTTTAACACGAGATATAGGTTTAACCGATTTTGGGGTTG
GCCCATCCTCGGAGCAGTTGACAAAGGAGGGAGCGGGGGCCTTGGTGGGT
TGGTCGAAGGAAGAGCAGCCCGCGCATTGGTACCGGAAAGAGACTGTGGA
GATGATGGAGAAATCATTGCCTTACACGGTGTTGCATGCATTGGAGCTGG
CGATTCACGCGCGTGTCTCACCCGAGGCAGTGCTGAAGAAGAAGACGAGG
TTGTGTATTCATCTCGCAGGCGCCTCATCGGAACTGGAGGGGTTTTCGGA
TTTTGGCGTCCTTTTCGATAAATTGCCTCATTTGGAGGAGTTGCAAGTGG
TACAAATCGGGTGGGTGGGATTGGTGGGGCCCTGTAAACGTTTCGTGTCT
GACCCGCAAGCCCCCCCTCCGGGATTGTTGGTGGGGGAAACGCGGCGCCT
AGGGCATGGACGGCGCTTGCGGGTGCAACGATGGAGGGGGTTGTACCATG
ATTTTTTGGCGAGGGCCTCCAAGCACGAATTTGATGGTCAGGGGTATTTG
CACGAGGCTCCGGATGTGGTGTTGCTTGCGAATCCGGGCTTGGATTTCTT
CTTTGATTGCTGGGCGCCGACATTGGCATGTTTGCGAGATGCGGGTTATT
TGACAGTGTTGACGGGCGGGAACCTCGATCATTCTCGTAAGCACCATAAT
TTAATTCTGCAGGCAATGGGTGTCAAGTTTGCCTTACACCTACGGACGTC
GAGGTTTGGGATTGTCCATGGGCAGCGGGCTTGTAAGAACCATAATTTGT
GCGCATTCTCAGGGGCGGCACCTTTGATGCCCGGGAGGGAACGACAACCG
TCCACGGCGGAGGAATGTGGGGAGGTTAGGGCGTTGTTGCAGCGGTTGGG
GTTGGAAATGGAAACGGAGGGCAGGGCGACGATGCGCTTAGCGCTGTTGA
ACCAGAAGGCGACCGCGAGGAATGTGGCGCAGATGGCCCTGGCGTCGTCG
AAGAGTTTGACACGGAGCTTTTGTGACGAGCCTGCCGCAGCTGCTGCCGC
TGTTGCTGCTGATGGTGGTGCTGGTGCTGTTGCTCCTATCGCTCCTGCCG
CTGCCCCTGTTGCTGCCGCAGCCGCTCTTGGTAAAGCAGGGGGAAGGAAC
AATCCGGAGCTGGAGAAGAAACATAACAGCACCGGCAAAAGCATCATGTA
TAGGAGGAAAAACAAGGAGCTGAGTTTGCCAAACGACAGTGAAGAGACTC
AGGAGGCGGCGGACGAGGCAGCCAATAACCGTCCGGACACACCGAGGCAA
TCGACGCCCACTGCTGCTGCTGCTGCTGTTGCTGCTGCTGGGAATCATGA
ATATATGAAAGGAGGGGTGACAACACAATCTCCGGGGCATGGGTGGTCTT
GCCGGAGCTTTCGCAAGGGCCAGAACGGAATTTATGCGGTAGAGAATGCT
TGAATGTATGTCCTAGAACACAGCCAGCTCAACCCCAGCCTCCACAAGAC
GGGCTCGGCCATTCTCGACCAAGAACAAGCCGTCCAAAAAAATTCCATGG
GACAGAACGAGGGCATGGGACAGTACGAGGCCACGGCTCAGCAGCACCAG
TGCACCGAATTCCCTGCCGAGCGCAATTTCGTGAGGACCTTACGCCATGT
TGCCGATGATGCGTCGCTCCTCGACCGGCACTATGCTCCTGCCTACCTCC
GCCGCGCGAGGGCCTATGAAGCGATGGGCAAGCTTGAACGTGCCCAAGAA
GTAGCCATGCAAGCCCTGTGCCTCCAACCACACAATGAGGAGGCCTTCCG
AAAAGTCCAATCTTTAACACGAGATATAGGTTTAACCGATTTTGGGGTTG
GCCCATCCTCGGAGCAGTTGACAAAGGAGGGAGCGGGGGCCTTGGTGGGT
TGGTCGAAGGAAGAGCAGCCCGCGCATTGGTACCGGAAAGAGACTGTGGA
GATGATGGAGAAATCATTGCCTTACACGGTGTTGCATGCATTGGAGCTGG
CGATTCACGCGCGTGTCTCACCCGAGGCAGTGCTGAAGAAGAAGACGAGG
TTGTGTATTCATCTCGCAGGCGCCTCATCGGAACTGGAGGGGTTTTCGGA
TTTTGGCGTCCTTTTCGATAAATTGCCTCATTTGGAGGAGTTGCAAGTGG
TACAAATCGGGTGGGTGGGATTGGTGGGGCCCTGTAAACGTTTCGTGTCT
GACCCGCAAGCCCCCCCTCCGGGATTGTTGGTGGGGGAAACGCGGCGCCT
AGGGCATGGACGGCGCTTGCGGGTGCAACGATGGAGGGGGTTGTACCATG
ATTTTTTGGCGAGGGCCTCCAAGCACGAATTTGATGGTCAGGGGTATTTG
CACGAGGCTCCGGATGTGGTGTTGCTTGCGAATCCGGGCTTGGATTTCTT
CTTTGATTGCTGGGCGCCGACATTGGCATGTTTGCGAGATGCGGGTTATT
TGACAGTGTTGACGGGCGGGAACCTCGATCATTCTCGTAAGCACCATAAT
TTAATTCTGCAGGCAATGGGTGTCAAGTTTGCCTTACACCTACGGACGTC
GAGGTTTGGGATTGTCCATGGGCAGCGGGCTTGTAAGAACCATAATTTGT
GCGCATTCTCAGGGGCGGCACCTTTGATGCCCGGGAGGGAACGACAACCG
TCCACGGCGGAGGAATGTGGGGAGGTTAGGGCGTTGTTGCAGCGGTTGGG
GTTGGAAATGGAAACGGAGGGCAGGGCGACGATGCGCTTAGCGCTGTTGA
ACCAGAAGGCGACCGCGAGGAATGTGGCGCAGATGGCCCTGGCGTCGTCG
AAGAGTTTGACACGGAGCTTTTGTGACGAGCCTGCCGCAGCTGCTGCCGC
TGTTGCTGCTGATGGTGGTGCTGGTGCTGTTGCTCCTATCGCTCCTGCCG
CTGCCCCTGTTGCTGCCGCAGCCGCTCTTGGTAAAGCAGGGGGAAGGAAC
AATCCGGAGCTGGAGAAGAAACATAACAGCACCGGCAAAAGCATCATGTA
TAGGAGGAAAAACAAGGAGCTGAGTTTGCCAAACGACAGTGAAGAGACTC
AGGAGGCGGCGGACGAGGCAGCCAATAACCGTCCGGACACACCGAGGCAA
TCGACGCCCACTGCTGCTGCTGCTGCTGTTGCTGCTGCTGGGAATCATGA
ATATATGAAAGGAGGGGTGACAACACAATCTCCGGGGCATGGGTGGTCTT
GCCGGAGCTTTCGCAAGGGCCAGAACGGAATTTATGCGGTAGAGAATGCT
TGAATGTATGTCCTAGAACACAGCCAGCTCAACCCCAGCCTCCACAAGAC
GGGCTCGGCCATTCTCGACCAAGAACAAGCCGTCCAAAAAAATTCCATGG
GACAGAACGAGGGCATGGGACAGTACGAGGCCACGGCTCAGCAGCACCAG back to top
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