Properties
| Property Name | Value |
|---|
| TranscriptId | 565079 |
| Track | FilteredModels2 |
| ProteinId | 564993 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:961363..962374 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3228 ID=mRNA_3228|Name=jgi.p|Nanoce1779_2|564993|organism=Nannochloropsis oceanica|type=mRNA|length=978bp
ATGGAGGTGACAGCAGCGCTGAGAGAGGAGGCAGAAAAGTTCAGGAGAGA
GGCAATCCAGGCACAAGAACAGGAATTGGAGGCCCGCCGGGCTCTTCAAG
CCAAGGAGGTTGAGTTGGAGGACGCCTTTCAGCAGCTTGCTGCGGCCACG
GCATTCACTCCTCCTCCTCCCCCTCCTCCGATTACCGACCACGGTGCATT
GGCTGTAGCAACAACAGAGAGAGAGCTTGCGAGCACCCGACAGGAATTAG
AGGACATGATTAGACGGGAGGAGTTGTTGCGTGGGGAAGTGGAAGTACTG
CGGAACGAGGCGGAGGCATATCATCGGTCGCACGCTGTGACCGAGGAAGA
GTGGCGGCATCGGATAGAAGAGCTTGAAACTCAAGCTGCAGGTTTGGAGG
TACGAGCGACCACAGCGGCTGAGTCATTGCTCTTGAAGGAGGGACAGCTT
GAGGAAACGGCCCGGGATCTGCAGAGCAGGGAGGAGAGGATGGAGGAAAT
GAGGCAGGAGACTGTGAGGCTGACGGCAAGAATGGTTGAGCTGGAGGGGC
AGTTTCAGGGGAAGGGAGACGAAGAAGGGGAAGAGGTCAATTTGTTGCGA
CGAGAAGTTGAGCGATTGAGTGAGGGATTGCAGACGGCCAGCAGGGTAGA
GCAAAAATACATGCAGGCACTGCAGGAGAAGGAGCAGGCGATGACGGAGC
TGGAAGAGAGGTTGCTTTGTCAGGATGTAGGGGAAGGAAAACAGCTTCAG
GAGATGCAGCATGAGGCTCAGCAATTGCGAGAGAGTTTGGATATGGCGAA
CGAGAGAGTGGAGAATGCGCATCTTAAATATCGCGGGATAATTGAAAGAA
ACGAAGTACAAATTAAGGAATTGAGACTGAAGATAAGCAATTTCGAGGCT
GCTCAAGAGCGACAAAGAGTGGCGGACAAGGAGGAGCAGCAGAAGCAGCA
CCAAAAGTTAAGCAGGTGTTTGAAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|564993 >mRNA_3228-protein ID=mRNA_3228-protein|Name=jgi.p|Nanoce1779_2|564993|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MEVTAALREEAEKFRREAIQAQEQELEARRALQAKEVELEDAFQQLAAAT
AFTPPPPPPPITDHGALAVATTERELASTRQELEDMIRREELLRGEVEVL
RNEAEAYHRSHAVTEEEWRHRIEELETQAAGLEVRATTAAESLLLKEGQL
EETARDLQSREERMEEMRQETVRLTARMVELEGQFQGKGDEEGEEVNLLR
REVERLSEGLQTASRVEQKYMQALQEKEQAMTELEERLLCQDVGEGKQLQ
EMQHEAQQLRESLDMANERVENAHLKYRGIIERNEVQIKELRLKISNFEA
AQERQRVADKEEQQKQHQKLSRCLK* back to topmRNA from alignment at scaffold_7:961363..962374- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3228 ID=mRNA_3228|Name=jgi.p|Nanoce1779_2|564993|organism=Nannochloropsis oceanica|type=mRNA|length=1012bp|location=Sequence derived from alignment at scaffold_7:961363..962374- (Nannochloropsis oceanica)
ATGGAGGTGACAGCAGCGCTGAGAGAGGAGGCAGAAAAGTTCAGGAGAGA
GGCAATCCAGGCACAAGAACAGGAATTGGAGGCCCGCCGGGCTCTTCAAG
CCAAGGAGGTTGAGTTGGAGGACGCCTTTCAGCAGCTTGCTGCGGCCACG
GCATTCACTCCTCCTCCTCCCCCTCCTCCGATTACCGACCACGGTGCATT
GGCTGTAGCAACAACAGAGAGAGAGCTTGCGAGCACCCGACAGGAATTAG
AGGACATGATTAGACGGGAGGAGTTGTTGCGTGGGGAAGTGGAAGTACTG
CGGAACGAGGCGGAGGCATATCATCGGTCGCACGCTGTGACCGAGGAAGA
GTGGCGGCATCGGATAGAAGAGCTTGAAACTCAAGCTGCAGGTTTGGAGG
TACGAGCGACCACAGCGGCTGAGTCATTGCTCTTGAAGGAGGGACAGCTT
GAGGAAACGGCCCGGGATCTGCAGAGCAGGGAGGAGAGGATGGAGGAAAT
GAGGCAGGAGACTGTGAGGCTGACGGCAAGAATGGTTGAGCTGGAGGGGC
AGTTTCAGGGGAAGGGAGACGAAGAAGGGGAAGAGGTCAATTTGTTGCGA
CGAGAAGTTGAGCGATTGAGTGAGGGATTGCAGACGGCCAGCAGGGTAGA
GCAAAAATACATGCAGGCACTGCAGGAGAAGGAGCAGGCGATGACGGAGC
TGGAAGAGAGGTTGCTTTGTCAGGATGTAGGGGAAGGAAAACAGCTTCAG
GAGATGCAGCATGAGGCTCAGCAATTGCGAGAGAGTTTGGATATGGCGAA
CGAGAGAGTGGAGAATGCGCATCTTAAATATCGCGGGATAATTGAAAGAA
ACGAAGTACAAATTAAGGAATTGAGACTGAAGATAAGCAATTTCGAGGCT
GCTCAAGAGCGACAAAGAGTGGCGGACAAGGAGGAGCAGCAGAAGCAGCA
CCAAAAGTTAAGTGAGGCCCAAAGTCAGATCTCGTCTTTGGAAAGGCAGG
TGTTTGAAGTAA back to topCoding sequence (CDS) from alignment at scaffold_7:961363..962374- >mRNA_3228 ID=mRNA_3228|Name=jgi.p|Nanoce1779_2|564993|organism=Nannochloropsis oceanica|type=CDS|length=1956bp|location=Sequence derived from alignment at scaffold_7:961363..962374- (Nannochloropsis oceanica)
GCAGGTGTTTGAAGTAAATGGAGGTGACAGCAGCGCTGAGAGAGGAGGCA
GAAAAGTTCAGGAGAGAGGCAATCCAGGCACAAGAACAGGAATTGGAGGC
CCGCCGGGCTCTTCAAGCCAAGGAGGTTGAGTTGGAGGACGCCTTTCAGC
AGCTTGCTGCGGCCACGGCATTCACTCCTCCTCCTCCCCCTCCTCCGATT
ACCGACCACGGTGCATTGGCTGTAGCAACAACAGAGAGAGAGCTTGCGAG
CACCCGACAGGAATTAGAGGACATGATTAGACGGGAGGAGTTGTTGCGTG
GGGAAGTGGAAGTACTGCGGAACGAGGCGGAGGCATATCATCGGTCGCAC
GCTGTGACCGAGGAAGAGTGGCGGCATCGGATAGAAGAGCTTGAAACTCA
AGCTGCAGGTTTGGAGGTACGAGCGACCACAGCGGCTGAGTCATTGCTCT
TGAAGGAGGGACAGCTTGAGGAAACGGCCCGGGATCTGCAGAGCAGGGAG
GAGAGGATGGAGGAAATGAGGCAGGAGACTGTGAGGCTGACGGCAAGAAT
GGTTGAGCTGGAGGGGCAGTTTCAGGGGAAGGGAGACGAAGAAGGGGAAG
AGGTCAATTTGTTGCGACGAGAAGTTGAGCGATTGAGTGAGGGATTGCAG
ACGGCCAGCAGGGTAGAGCAAAAATACATGCAGGCACTGCAGGAGAAGGA
GCAGGCGATGACGGAGCTGGAAGAGAGGTTGCTTTGTCAGGATGTAGGGG
AAGGAAAACAGCTTCAGGAGATGCAGCATGAGGCTCAGCAATTGCGAGAG
AGTTTGGATATGGCGAACGAGAGAGTGGAGAATGCGCATCTTAAATATCG
CGGGATAATTGAAAGAAACGAAGTACAAATTAAGGAATTGAGACTGAAGA
TAAGCAATTTCGAGGCTGCTCAAGAGCGACAAAGAGTGGCGGACAAGGAG
GAGCAGCAGAAGCAGCACCAAAAGTTAAGCAGGTGTTTGAAGTAAATGGA
GGTGACAGCAGCGCTGAGAGAGGAGGCAGAAAAGTTCAGGAGAGAGGCAA
TCCAGGCACAAGAACAGGAATTGGAGGCCCGCCGGGCTCTTCAAGCCAAG
GAGGTTGAGTTGGAGGACGCCTTTCAGCAGCTTGCTGCGGCCACGGCATT
CACTCCTCCTCCTCCCCCTCCTCCGATTACCGACCACGGTGCATTGGCTG
TAGCAACAACAGAGAGAGAGCTTGCGAGCACCCGACAGGAATTAGAGGAC
ATGATTAGACGGGAGGAGTTGTTGCGTGGGGAAGTGGAAGTACTGCGGAA
CGAGGCGGAGGCATATCATCGGTCGCACGCTGTGACCGAGGAAGAGTGGC
GGCATCGGATAGAAGAGCTTGAAACTCAAGCTGCAGGTTTGGAGGTACGA
GCGACCACAGCGGCTGAGTCATTGCTCTTGAAGGAGGGACAGCTTGAGGA
AACGGCCCGGGATCTGCAGAGCAGGGAGGAGAGGATGGAGGAAATGAGGC
AGGAGACTGTGAGGCTGACGGCAAGAATGGTTGAGCTGGAGGGGCAGTTT
CAGGGGAAGGGAGACGAAGAAGGGGAAGAGGTCAATTTGTTGCGACGAGA
AGTTGAGCGATTGAGTGAGGGATTGCAGACGGCCAGCAGGGTAGAGCAAA
AATACATGCAGGCACTGCAGGAGAAGGAGCAGGCGATGACGGAGCTGGAA
GAGAGGTTGCTTTGTCAGGATGTAGGGGAAGGAAAACAGCTTCAGGAGAT
GCAGCATGAGGCTCAGCAATTGCGAGAGAGTTTGGATATGGCGAACGAGA
GAGTGGAGAATGCGCATCTTAAATATCGCGGGATAATTGAAAGAAACGAA
GTACAAATTAAGGAATTGAGACTGAAGATAAGCAATTTCGAGGCTGCTCA
AGAGCGACAAAGAGTGGCGGACAAGGAGGAGCAGCAGAAGCAGCACCAAA
AGTTAA back to top
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