Properties
| Property Name | Value |
|---|
| TranscriptId | 401135 |
| Track | FilteredModels2 |
| ProteinId | 401049 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:944795..946036 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3221 ID=mRNA_3221|Name=jgi.p|Nanoce1779_2|401049|organism=Nannochloropsis oceanica|type=mRNA|length=1108bp
AAGCGCCGGCACAATTCACTTGTGATTGCATCCTCATCCTATTCGTATTA
TCCCTGGCAATTGGTGCATGCGCTTTGAGGGCGTAGGGTGAAAGTGCCTC
GTGCGACGCCCAAGAGCATTCTGTGAGATCCTTTTACTGCCCTTGCTCAC
CAACCTCATACACTCCTTGAACGCAGGTTCATCAACATGAGCAGCATGGA
AACAAGCGACTCCAGCAGCGGGACTGACAAGACGGGTGCGGAAGAAAAGA
AAAATCTAGGCAACAAGGCATACATGGCCAAGAAGTATGACGAAGCTATC
ACACGGTACAGTGAGGCCATCGAGCTCGATCCCGACAGCCACATTTACTA
TTCCAATCGCAGCGCATGCCATGGGGCCAAGGGCGACTGGGCTTCGGCCG
CCGCGGACGCCAAAATCTGTCTTGGCAAGGACCCGAATTTCTTGAAGGGA
TACTATCGCTTGACAATGGCACAGATGGAAATGAAGGATTTTGACGCGGC
CTTGGAGACGATCAAGGCAGGGTTGAAACGACAGCCTGACAATGCGGAGC
TCCAAAAGCAACTCCGATTGGTCAAAGCCAAGAAGCAAGCAGCGGATTAT
GTGCGGCATACCGATAGCAGTGGATCAGCGGGGCGAGGTATGTCAGGGGA
GGAGCTGGCGGAGGTGCAGGAGCAGTACATTGCTGCAAACAAGGAATTGA
AAGAAGTACGGTCCAAGGGCGTGGCGGCCTCGGGAGAGAAGCGACGGAAC
GAACTGTGCTTGTCCGAGTTAAGCAAGATATCGGAGGAGACAAGGTTGTT
TAATTCGGTAGGGAAAATGTTCGTACTGACGCCGCGTGCACAAGTGTTGA
GTCAGTTGGAGAGGTGCGTGGCCGAGGCGGAGCAGCGGGCTACAGATTTG
GAAGCACGACATGCGTACCTAGAAGCAAAGATCTCGTCGCACGAAGCGAT
ATTGAAGGAGGCATCCAAGGCAGGCGGGGCATCGGCTTGACGATTGGCCG
GGGGAGGAGGATAATCCCAACGAGTAATGTTTTGAGAGATGGAAAGTGTC
CGAATGACGAAAAGGAAGACGAAAGAATTCCTGGTACTCTTATTGCTTAA
GTATTGCC back to topprotein sequence of jgi.p|Nanoce1779_2|401049 >mRNA_3221-protein ID=mRNA_3221-protein|Name=jgi.p|Nanoce1779_2|401049|organism=Nannochloropsis oceanica|type=polypeptide|length=268bp
MSSMETSDSSSGTDKTGAEEKKNLGNKAYMAKKYDEAITRYSEAIELDPD
SHIYYSNRSACHGAKGDWASAAADAKICLGKDPNFLKGYYRLTMAQMEMK
DFDAALETIKAGLKRQPDNAELQKQLRLVKAKKQAADYVRHTDSSGSAGR
GMSGEELAEVQEQYIAANKELKEVRSKGVAASGEKRRNELCLSELSKISE
ETRLFNSVGKMFVLTPRAQVLSQLERCVAEAEQRATDLEARHAYLEAKIS
SHEAILKEASKAGGASA* back to topmRNA from alignment at scaffold_7:944795..946036- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3221 ID=mRNA_3221|Name=jgi.p|Nanoce1779_2|401049|organism=Nannochloropsis oceanica|type=mRNA|length=1242bp|location=Sequence derived from alignment at scaffold_7:944795..946036- (Nannochloropsis oceanica)
AAGCGCCGGCACAATTCACTTGTGATTGCATCCTCATCCTATTCGTATTA
TCCCTGGCAATTGGTGCATGCGCTTTGAGGGCGTAGGGTGAAAGTGCCTC
GTGCGACGCCCAAGAGCATTCTGTGAGATCCTTTTACTGCCCTTGCTCAC
CAACCTCATACACTCCTTGAACGCAGGTTCATCAACATGAGCAGCATGGA
AACAAGCGACTCCAGCAGCGGGACTGACAAGACGGGTGCGGAAGAAAAGA
AAAAGTAAGCCCCCCCCCCCCCGTCTTCAATTAAATTTGTTCTACCCTAG
TTCCTCCCCTACCTCCCTCCTCCCTCTTTTTCGCAGCTCTCCATCCACCC
GACCGCATCCAACCGCACCCCTATAAAAACCAAATTAGTCTAGGCAACAA
GGCATACATGGCCAAGAAGTATGACGAAGCTATCACACGGTACAGTGAGG
CCATCGAGCTCGATCCCGACAGCCACATTTACTATTCCAATCGCAGCGCA
TGCCATGGGGCCAAGGGCGACTGGGCTTCGGCCGCCGCGGACGCCAAAAT
CTGTCTTGGCAAGGACCCGAATTTCTTGAAGGGATACTATCGCTTGACAA
TGGCACAGATGGAAATGAAGGATTTTGACGCGGCCTTGGAGACGATCAAG
GCAGGGTTGAAACGACAGCCTGACAATGCGGAGCTCCAAAAGCAACTCCG
ATTGGTCAAAGCCAAGAAGCAAGCAGCGGATTATGTGCGGCATACCGATA
GCAGTGGATCAGCGGGGCGAGGTATGTCAGGGGAGGAGCTGGCGGAGGTG
CAGGAGCAGTACATTGCTGCAAACAAGGAATTGAAAGAAGTACGGTCCAA
GGGCGTGGCGGCCTCGGGAGAGAAGCGACGGAACGAACTGTGCTTGTCCG
AGTTAAGCAAGATATCGGAGGAGACAAGGTTGTTTAATTCGGTAGGGAAA
ATGTTCGTACTGACGCCGCGTGCACAAGTGTTGAGTCAGTTGGAGAGGTG
CGTGGCCGAGGCGGAGCAGCGGGCTACAGATTTGGAAGCACGACATGCGT
ACCTAGAAGCAAAGATCTCGTCGCACGAAGCGATATTGAAGGAGGCATCC
AAGGCAGGCGGGGCATCGGCTTGACGATTGGCCGGGGGAGGAGGATAATC
CCAACGAGTAATGTTTTGAGAGATGGAAAGTGTCCGAATGACGAAAAGGA
AGACGAAAGAATTCCTGGTACTCTTATTGCTTAAGTATTGCC back to topCoding sequence (CDS) from alignment at scaffold_7:944795..946036- >mRNA_3221 ID=mRNA_3221|Name=jgi.p|Nanoce1779_2|401049|organism=Nannochloropsis oceanica|type=CDS|length=1608bp|location=Sequence derived from alignment at scaffold_7:944795..946036- (Nannochloropsis oceanica)
TCTAGGCAACAAGGCATACATGGCCAAGAAGTATGACGAAGCTATCACAC
GGTACAGTGAGGCCATCGAGCTCGATCCCGACAGCCACATTTACTATTCC
AATCGCAGCGCATGCCATGGGGCCAAGGGCGACTGGGCTTCGGCCGCCGC
GGACGCCAAAATCTGTCTTGGCAAGGACCCGAATTTCTTGAAGGGATACT
ATCGCTTGACAATGGCACAGATGGAAATGAAGGATTTTGACGCGGCCTTG
GAGACGATCAAGGCAGGGTTGAAACGACAGCCTGACAATGCGGAGCTCCA
AAAGCAACTCCGATTGGTCAAAGCCAAGAAGCAAGCAGCGGATTATGTGC
GGCATACCGATAGCAGTGGATCAGCGGGGCGAGGTATGTCAGGGGAGGAG
CTGGCGGAGGTGCAGGAGCAGTACATTGCTGCAAACAAGGAATTGAAAGA
AGTACGGTCCAAGGGCGTGGCGGCCTCGGGAGAGAAGCGACGGAACGAAC
TGTGCTTGTCCGAGTTAAGCAAGATATCGGAGGAGACAAGGTTGTTTAAT
TCGGTAGGGAAAATGTTCGTACTGACGCCGCGTGCACAAGTGTTGAGTCA
GTTGGAGAGGTGCGTGGCCGAGGCGGAGCAGCGGGCTACAGATTTGGAAG
CACGACATGCGTACCTAGAAGCAAAGATCTCGTCGCACGAAGCGATATTG
AAGGAGGCATCCAAGGCAGGCGGGGCATCGGCTTGAATGAGCAGCATGGA
AACAAGCGACTCCAGCAGCGGGACTGACAAGACGGGTGCGGAAGAAAAGA
AAAATCTAGGCAACAAGGCATACATGGCCAAGAAGTATGACGAAGCTATC
ACACGGTACAGTGAGGCCATCGAGCTCGATCCCGACAGCCACATTTACTA
TTCCAATCGCAGCGCATGCCATGGGGCCAAGGGCGACTGGGCTTCGGCCG
CCGCGGACGCCAAAATCTGTCTTGGCAAGGACCCGAATTTCTTGAAGGGA
TACTATCGCTTGACAATGGCACAGATGGAAATGAAGGATTTTGACGCGGC
CTTGGAGACGATCAAGGCAGGGTTGAAACGACAGCCTGACAATGCGGAGC
TCCAAAAGCAACTCCGATTGGTCAAAGCCAAGAAGCAAGCAGCGGATTAT
GTGCGGCATACCGATAGCAGTGGATCAGCGGGGCGAGGTATGTCAGGGGA
GGAGCTGGCGGAGGTGCAGGAGCAGTACATTGCTGCAAACAAGGAATTGA
AAGAAGTACGGTCCAAGGGCGTGGCGGCCTCGGGAGAGAAGCGACGGAAC
GAACTGTGCTTGTCCGAGTTAAGCAAGATATCGGAGGAGACAAGGTTGTT
TAATTCGGTAGGGAAAATGTTCGTACTGACGCCGCGTGCACAAGTGTTGA
GTCAGTTGGAGAGGTGCGTGGCCGAGGCGGAGCAGCGGGCTACAGATTTG
GAAGCACGACATGCGTACCTAGAAGCAAAGATCTCGTCGCACGAAGCGAT
ATTGAAGGAGGCATCCAAGGCAGGCGGGGCATCGGCTTGAATGAGCAGCA
TGGAAACAAGCGACTCCAGCAGCGGGACTGACAAGACGGGTGCGGAAGAA
AAGAAAAA back to top
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