Properties
| Property Name | Value |
|---|
| TranscriptId | 623074 |
| Track | FilteredModels2 |
| ProteinId | 622988 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:916744..918481 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3207 ID=mRNA_3207|Name=jgi.p|Nanoce1779_2|622988|organism=Nannochloropsis oceanica|type=mRNA|length=1374bp
ATGGCACCCGTTGCACTGAGGCGGAGTGTTCAATCAACCATTTGCGTCGC
ATCACGCTCGTCCCGGTCACCATTGCTTCAGCACCAATCCTTCGCCCGCT
CCCCCTCGACTTCCTCCTCATCTTCCTGTTCCTCCTCTGCTTCATCGTCC
ACCAATGTCCGTCCCTTGGCCTACTGGCTGCTGGGTACGGGGGCCCTCGT
GGCAGGAATGGTGACCGTGGGTGGCATTACGCGCCTGACAAAATCGGGCT
TGTCAATGACTGATTGGAGGTTGCAAGGCTCGTTGCCGCCTTTGAATGAC
GCGGAGTGGCTAGCGGAATTCACGAGATACAAACAATTCCCGGAGTACCA
GCAACGACAGAGCATGACCTTGGATGAATTCAAGTTTATTTTCTATTGGG
AGTGGGGTCATAGGATGATGGGTCGATTTATTGGGCTGGCGTACGGCGTC
CCTCTTGTTTACTTCGCGGCGCGTGGTCGGATCCCACGGAGTCTCTACCC
GCGGTTGGGGGCATTGTTCGCACTAGGAGGAGGCCAAGGGTTGATTGGAT
GGTGGATGGTGAAGAGCGGGCTGGAGATGGATCCGCAGCAGAGGAAGGAG
ATTCGCGTGAGTCCTTACAGGCTCGCAGCCCACCTGGGCATGGCATTCAC
CACGTTTTCCCTTCTCATTTGGACGGGCCTCGACCTTCTCCATCCTCCAG
AGAAGGCCTCGCGGGCCGCTGCAGTGTTGCAAGAGCGACTCTTGGCCGCT
GCGTCTCCGCAGGCTTCCCAGCAGTTGCTGCAGCGGGTGTCTCGTGTGCG
TAACTTGGGAATCGCATCTGCTGCCTTGCTCGCTACGACCATCGTGTCAG
GGGCCTTCGTCGCGGGGAATGACGCTGGACATGCGTACAATGAGTTCCCA
AAAATGATGCCTCACGCCTGGATTGCCCCTGAGGTGTTTGAATGGTCAAA
TTTTGAACCGAAGTGGCGCAATATATTCGAAAACACCGCATTGGTACAGC
TGGATCACCGTCTCCTTGCCTTGTCCACAGCCGGTTTGATTGGCGCCACG
CTCGTCGCGGCCCGCCGAGGACAAGTATGGTCTATGTTGCCTTCAGAGAC
CAAGACGGCGCTTACCGCCACAGTTGGTATGGCAGGAGCGCAGGTCGCGC
TGGGGATCTCAACGTTGCTGCTGTACGTCCCCGTTCCCTTGGCGGCGGCG
CACCAGGCGGGGTCATTAGTGTTGTTAACTTTACTGTCGTGGTCCGTGCA
TTCCATGAAATTCCTCAAGAAGCTGCCGGCGGGCTCGGCACAGCAGTTGT
GGAAGCAACAGCAGCAGCAGCAGCAGGGAGGGACAGCAGCAGTTGGGAAA
GTTGTGGCTGAGATGGTTAAGTAG back to topprotein sequence of jgi.p|Nanoce1779_2|622988 >mRNA_3207-protein ID=mRNA_3207-protein|Name=jgi.p|Nanoce1779_2|622988|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MAPVALRRSVQSTICVASRSSRSPLLQHQSFARSPSTSSSSSCSSSASSS
TNVRPLAYWLLGTGALVAGMVTVGGITRLTKSGLSMTDWRLQGSLPPLND
AEWLAEFTRYKQFPEYQQRQSMTLDEFKFIFYWEWGHRMMGRFIGLAYGV
PLVYFAARGRIPRSLYPRLGALFALGGGQGLIGWWMVKSGLEMDPQQRKE
IRVSPYRLAAHLGMAFTTFSLLIWTGLDLLHPPEKASRAAAVLQERLLAA
ASPQASQQLLQRVSRVRNLGIASAALLATTIVSGAFVAGNDAGHAYNEFP
KMMPHAWIAPEVFEWSNFEPKWRNIFENTALVQLDHRLLALSTAGLIGAT
LVAARRGQVWSMLPSETKTALTATVGMAGAQVALGISTLLLYVPVPLAAA
HQAGSLVLLTLLSWSVHSMKFLKKLPAGSAQQLWKQQQQQQQGGTAAVGK
VVAEMVK* back to topmRNA from alignment at scaffold_7:916744..918481- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3207 ID=mRNA_3207|Name=jgi.p|Nanoce1779_2|622988|organism=Nannochloropsis oceanica|type=mRNA|length=1738bp|location=Sequence derived from alignment at scaffold_7:916744..918481- (Nannochloropsis oceanica)
ATGGCACCCGTTGCACTGAGGCGGAGTGTTCAATCAACCATTTGCGTCGC
ATCACGCTCGTCCCGGTCACCATTGCTTCAGGTAAGCCTCCTTCGATGTC
CGAGTCTCCGTGTATGTTCAGCTTCGTCAGATCCTCCTTTCTACTGTCTG
TGTGGATTCCCAGGAGTATGCTCGACCCTTTCTCGTTTAATCATCGCACA
ACATACCTCTGCGGGGCCTTGTTGGTCATCCACCCACGTGTCCGTGCTGC
GCTTAGACCAGGATAGGGGGAGGTCTCGCCTCCCTTGTCGTGCCTCCCTC
CTCAGTACCTTTGACCATGTCGCGTCTATGCAAGCTTTCCGCATCGACAA
TCCGTCTCCACTTCATTCCACCAATACCATTCACACTAAACCACACACAG
CAGAAGCCTCGCCGCCACATCGCCACCACAACACTTCCCCCCGAGCACCA
ATCCTTCGCCCGCTCCCCCTCGACTTCCTCCTCATCTTCCTGTTCCTCCT
CTGCTTCATCGTCCACCAATGTCCGTCCCTTGGCCTACTGGCTGCTGGGT
ACGGGGGCCCTCGTGGCAGGAATGGTGACCGTGGGTGGCATTACGCGCCT
GACAAAATCGGGCTTGTCAATGACTGATTGGAGGTTGCAAGGCTCGTTGC
CGCCTTTGAATGACGCGGAGTGGCTAGCGGAATTCACGAGATACAAACAA
TTCCCGGAGTACCAGCAACGACAGAGCATGACCTTGGATGAATTCAAGTT
TATTTTCTATTGGGAGTGGGGTCATAGGATGATGGGTCGATTTATTGGGC
TGGCGTACGGCGTCCCTCTTGTTTACTTCGCGGCGCGTGGTCGGATCCCA
CGGAGTCTCTACCCGCGGTTGGGGGCATTGTTCGCACTAGGAGGAGGCCA
AGGGTTGATTGGATGGTGGATGGTGAAGAGCGGGCTGGAGATGGATCCGC
AGCAGAGGAAGGAGATTCGCGTGAGTCCTTACAGGCTCGCAGCCCACCTG
GGCATGGCATTCACCACGTTTTCCCTTCTCATTTGGACGGGCCTCGACCT
TCTCCATCCTCCAGAGAAGGCCTCGCGGGCCGCTGCAGTGTTGCAAGAGC
GACTCTTGGCCGCTGCGTCTCCGCAGGCTTCCCAGCAGTTGCTGCAGCGG
GTGTCTCGTGTGCGTAACTTGGGAATCGCATCTGCTGCCTTGCTCGCTAC
GACCATCGTGTCAGGGGCCTTCGTCGCGGGGAATGACGCTGGACATGCGT
ACAATGAGTTCCCAAAAATGATGCCTCACGCCTGGATTGCCCCTGAGGTG
TTTGAATGGTCAAATTTTGAACCGAAGTGGCGCAATATATTCGAAAACAC
CGCATTGGTACAGCTGGATCACCGTCTCCTTGCCTTGTCCACAGCCGGTT
TGATTGGCGCCACGCTCGTCGCGGCCCGCCGAGGACAAGTATGGTCTATG
TTGCCTTCAGAGACCAAGACGGCGCTTACCGCCACAGTTGGTATGGCAGG
AGCGCAGGTCGCGCTGGGGATCTCAACGTTGCTGCTGTACGTCCCCGTTC
CCTTGGCGGCGGCGCACCAGGCGGGGTCATTAGTGTTGTTAACTTTACTG
TCGTGGTCCGTGCATTCCATGAAATTCCTCAAGAAGCTGCCGGCGGGCTC
GGCACAGCAGTTGTGGAAGCAACAGCAGCAGCAGCAGCAGGGAGGGACAG
CAGCAGTTGGGAAAGTTGTGGCTGAGATGGTTAAGTAG back to topCoding sequence (CDS) from alignment at scaffold_7:916744..918481- >mRNA_3207 ID=mRNA_3207|Name=jgi.p|Nanoce1779_2|622988|organism=Nannochloropsis oceanica|type=CDS|length=2748bp|location=Sequence derived from alignment at scaffold_7:916744..918481- (Nannochloropsis oceanica)
CACCAATCCTTCGCCCGCTCCCCCTCGACTTCCTCCTCATCTTCCTGTTC
CTCCTCTGCTTCATCGTCCACCAATGTCCGTCCCTTGGCCTACTGGCTGC
TGGGTACGGGGGCCCTCGTGGCAGGAATGGTGACCGTGGGTGGCATTACG
CGCCTGACAAAATCGGGCTTGTCAATGACTGATTGGAGGTTGCAAGGCTC
GTTGCCGCCTTTGAATGACGCGGAGTGGCTAGCGGAATTCACGAGATACA
AACAATTCCCGGAGTACCAGCAACGACAGAGCATGACCTTGGATGAATTC
AAGTTTATTTTCTATTGGGAGTGGGGTCATAGGATGATGGGTCGATTTAT
TGGGCTGGCGTACGGCGTCCCTCTTGTTTACTTCGCGGCGCGTGGTCGGA
TCCCACGGAGTCTCTACCCGCGGTTGGGGGCATTGTTCGCACTAGGAGGA
GGCCAAGGGTTGATTGGATGGTGGATGGTGAAGAGCGGGCTGGAGATGGA
TCCGCAGCAGAGGAAGGAGATTCGCGTGAGTCCTTACAGGCTCGCAGCCC
ACCTGGGCATGGCATTCACCACGTTTTCCCTTCTCATTTGGACGGGCCTC
GACCTTCTCCATCCTCCAGAGAAGGCCTCGCGGGCCGCTGCAGTGTTGCA
AGAGCGACTCTTGGCCGCTGCGTCTCCGCAGGCTTCCCAGCAGTTGCTGC
AGCGGGTGTCTCGTGTGCGTAACTTGGGAATCGCATCTGCTGCCTTGCTC
GCTACGACCATCGTGTCAGGGGCCTTCGTCGCGGGGAATGACGCTGGACA
TGCGTACAATGAGTTCCCAAAAATGATGCCTCACGCCTGGATTGCCCCTG
AGGTGTTTGAATGGTCAAATTTTGAACCGAAGTGGCGCAATATATTCGAA
AACACCGCATTGGTACAGCTGGATCACCGTCTCCTTGCCTTGTCCACAGC
CGGTTTGATTGGCGCCACGCTCGTCGCGGCCCGCCGAGGACAAGTATGGT
CTATGTTGCCTTCAGAGACCAAGACGGCGCTTACCGCCACAGTTGGTATG
GCAGGAGCGCAGGTCGCGCTGGGGATCTCAACGTTGCTGCTGTACGTCCC
CGTTCCCTTGGCGGCGGCGCACCAGGCGGGGTCATTAGTGTTGTTAACTT
TACTGTCGTGGTCCGTGCATTCCATGAAATTCCTCAAGAAGCTGCCGGCG
GGCTCGGCACAGCAGTTGTGGAAGCAACAGCAGCAGCAGCAGCAGGGAGG
GACAGCAGCAGTTGGGAAAGTTGTGGCTGAGATGGTTAAGTAGATGGCAC
CCGTTGCACTGAGGCGGAGTGTTCAATCAACCATTTGCGTCGCATCACGC
TCGTCCCGGTCACCATTGCTTCAGCACCAATCCTTCGCCCGCTCCCCCTC
GACTTCCTCCTCATCTTCCTGTTCCTCCTCTGCTTCATCGTCCACCAATG
TCCGTCCCTTGGCCTACTGGCTGCTGGGTACGGGGGCCCTCGTGGCAGGA
ATGGTGACCGTGGGTGGCATTACGCGCCTGACAAAATCGGGCTTGTCAAT
GACTGATTGGAGGTTGCAAGGCTCGTTGCCGCCTTTGAATGACGCGGAGT
GGCTAGCGGAATTCACGAGATACAAACAATTCCCGGAGTACCAGCAACGA
CAGAGCATGACCTTGGATGAATTCAAGTTTATTTTCTATTGGGAGTGGGG
TCATAGGATGATGGGTCGATTTATTGGGCTGGCGTACGGCGTCCCTCTTG
TTTACTTCGCGGCGCGTGGTCGGATCCCACGGAGTCTCTACCCGCGGTTG
GGGGCATTGTTCGCACTAGGAGGAGGCCAAGGGTTGATTGGATGGTGGAT
GGTGAAGAGCGGGCTGGAGATGGATCCGCAGCAGAGGAAGGAGATTCGCG
TGAGTCCTTACAGGCTCGCAGCCCACCTGGGCATGGCATTCACCACGTTT
TCCCTTCTCATTTGGACGGGCCTCGACCTTCTCCATCCTCCAGAGAAGGC
CTCGCGGGCCGCTGCAGTGTTGCAAGAGCGACTCTTGGCCGCTGCGTCTC
CGCAGGCTTCCCAGCAGTTGCTGCAGCGGGTGTCTCGTGTGCGTAACTTG
GGAATCGCATCTGCTGCCTTGCTCGCTACGACCATCGTGTCAGGGGCCTT
CGTCGCGGGGAATGACGCTGGACATGCGTACAATGAGTTCCCAAAAATGA
TGCCTCACGCCTGGATTGCCCCTGAGGTGTTTGAATGGTCAAATTTTGAA
CCGAAGTGGCGCAATATATTCGAAAACACCGCATTGGTACAGCTGGATCA
CCGTCTCCTTGCCTTGTCCACAGCCGGTTTGATTGGCGCCACGCTCGTCG
CGGCCCGCCGAGGACAAGTATGGTCTATGTTGCCTTCAGAGACCAAGACG
GCGCTTACCGCCACAGTTGGTATGGCAGGAGCGCAGGTCGCGCTGGGGAT
CTCAACGTTGCTGCTGTACGTCCCCGTTCCCTTGGCGGCGGCGCACCAGG
CGGGGTCATTAGTGTTGTTAACTTTACTGTCGTGGTCCGTGCATTCCATG
AAATTCCTCAAGAAGCTGCCGGCGGGCTCGGCACAGCAGTTGTGGAAGCA
ACAGCAGCAGCAGCAGCAGGGAGGGACAGCAGCAGTTGGGAAAGTTGTGG
CTGAGATGGTTAAGTAGATGGCACCCGTTGCACTGAGGCGGAGTGTTCAA
TCAACCATTTGCGTCGCATCACGCTCGTCCCGGTCACCATTGCTTCAG back to top
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