Properties
| Property Name | Value |
|---|
| TranscriptId | 584972 |
| Track | FilteredModels2 |
| ProteinId | 584886 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:889051..890236 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3194 ID=mRNA_3194|Name=jgi.p|Nanoce1779_2|584886|organism=Nannochloropsis oceanica|type=mRNA|length=1186bp
CAGGTAGGTAATGATGCGTGGACGTCCGGCCCTCTCTGCCGTTGTTCTAG
CCCGCCGGTGCCTGGCCTCTCCCCAGCATCTGGCCGCAAAGAGTCAGACG
GTGCTAGTGCCGCATCGTCCAGGCCACCTCAACACCAAACCCACAAAGAG
AGCTTTTGCCACCACCACCACCGCTGCCGATGTGTCCAACGACAGTAGCA
CAGATGCGCCTCCGCCTGCCACGCCACATGCCGCGACTTTCCAAGACCCG
CGACAAGAGATCCTTGCGGCGGCATTGCCCCTAGTCGCCAAGCATGGTTG
GACCGAAGAGACCTTGGCAGCTGGTGCTGCCTCACTCGGGTTTCCTGCCG
TAGCGCACGGCATGTTTGGACGGGGTGCCATTGAATTGGTGGAGTACGCT
ATGGCACAAATTGATGCTGCATGGGTCGCCGAGCTTGAGGCGCGTCAAGA
CGAATTGGCTTCTTTGCCCTCGTCACGTGAGAGGTTGGAGCGAGCGATTC
GATGGCGCCTGCGATTAATTGCCCCCTATTTAGCACAATGGCCACAAGCC
TTGGCGCTAGGGTTGTCGCCGCACAATTTGGAGACAACCGCACGGGGATT
GGCGGAAGTGGCGGACGAGTTGTGTGTGACCACGGAGAAGGATGAGGGGA
TGGACTTGACAAATTGGTACGCGCATCGCGCCACCGTCTGCTCGGTTTAC
GTAGCCACGGAATTATTTTTCCTGACGGATTACTCAGAGGATTATCAGGA
CACCTGGGCATTTTTGGAAAGGCGACTTCGGGATGTTGAGGCTTTGTCGC
ATGCCCCTACCAATGTGCAGGAGGGGGTTCTAGCCTTCCAGACCGCCGCC
TCCGCCATGGCCTCAGCGGTTGCTTCTTTGGCACAGCCTGCCATGATGGG
GGCATTGCAAAAAGTACCATGGACAGGGACAATTGTCGCAGTGATGCATA
CTGCCTTGGCTAATCTGGCCGCAATGGCCCCGGCGAGTCCGTCAACTTGT
GGGCCCTTCCAAGAGAAGTGGGATGTAGCGGGGAAAGGAGGGAAGGAAGA
GGGTAGCCAAAGTTCGACCGATTATAGAGTGCCCTTGGAGAAAGATCCAT
ACGCGGAGGAAGAAGCCCAGAGGCTGAAGAAGTGAGGACTTGGTTGGTTT
ATATGTACACTCAAAGAAGGAAAATGAGGAGATCGG back to topprotein sequence of jgi.p|Nanoce1779_2|584886 >mRNA_3194-protein ID=mRNA_3194-protein|Name=jgi.p|Nanoce1779_2|584886|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MMRGRPALSAVVLARRCLASPQHLAAKSQTVLVPHRPGHLNTKPTKRAFA
TTTTAADVSNDSSTDAPPPATPHAATFQDPRQEILAAALPLVAKHGWTEE
TLAAGAASLGFPAVAHGMFGRGAIELVEYAMAQIDAAWVAELEARQDELA
SLPSSRERLERAIRWRLRLIAPYLAQWPQALALGLSPHNLETTARGLAEV
ADELCVTTEKDEGMDLTNWYAHRATVCSVYVATELFFLTDYSEDYQDTWA
FLERRLRDVEALSHAPTNVQEGVLAFQTAASAMASAVASLAQPAMMGALQ
KVPWTGTIVAVMHTALANLAAMAPASPSTCGPFQEKWDVAGKGGKEEGSQ
SSTDYRVPLEKDPYAEEEAQRLKK* back to topmRNA from alignment at scaffold_7:889051..890236- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3194 ID=mRNA_3194|Name=jgi.p|Nanoce1779_2|584886|organism=Nannochloropsis oceanica|type=mRNA|length=1186bp|location=Sequence derived from alignment at scaffold_7:889051..890236- (Nannochloropsis oceanica)
CAGGTAGGTAATGATGCGTGGACGTCCGGCCCTCTCTGCCGTTGTTCTAG
CCCGCCGGTGCCTGGCCTCTCCCCAGCATCTGGCCGCAAAGAGTCAGACG
GTGCTAGTGCCGCATCGTCCAGGCCACCTCAACACCAAACCCACAAAGAG
AGCTTTTGCCACCACCACCACCGCTGCCGATGTGTCCAACGACAGTAGCA
CAGATGCGCCTCCGCCTGCCACGCCACATGCCGCGACTTTCCAAGACCCG
CGACAAGAGATCCTTGCGGCGGCATTGCCCCTAGTCGCCAAGCATGGTTG
GACCGAAGAGACCTTGGCAGCTGGTGCTGCCTCACTCGGGTTTCCTGCCG
TAGCGCACGGCATGTTTGGACGGGGTGCCATTGAATTGGTGGAGTACGCT
ATGGCACAAATTGATGCTGCATGGGTCGCCGAGCTTGAGGCGCGTCAAGA
CGAATTGGCTTCTTTGCCCTCGTCACGTGAGAGGTTGGAGCGAGCGATTC
GATGGCGCCTGCGATTAATTGCCCCCTATTTAGCACAATGGCCACAAGCC
TTGGCGCTAGGGTTGTCGCCGCACAATTTGGAGACAACCGCACGGGGATT
GGCGGAAGTGGCGGACGAGTTGTGTGTGACCACGGAGAAGGATGAGGGGA
TGGACTTGACAAATTGGTACGCGCATCGCGCCACCGTCTGCTCGGTTTAC
GTAGCCACGGAATTATTTTTCCTGACGGATTACTCAGAGGATTATCAGGA
CACCTGGGCATTTTTGGAAAGGCGACTTCGGGATGTTGAGGCTTTGTCGC
ATGCCCCTACCAATGTGCAGGAGGGGGTTCTAGCCTTCCAGACCGCCGCC
TCCGCCATGGCCTCAGCGGTTGCTTCTTTGGCACAGCCTGCCATGATGGG
GGCATTGCAAAAAGTACCATGGACAGGGACAATTGTCGCAGTGATGCATA
CTGCCTTGGCTAATCTGGCCGCAATGGCCCCGGCGAGTCCGTCAACTTGT
GGGCCCTTCCAAGAGAAGTGGGATGTAGCGGGGAAAGGAGGGAAGGAAGA
GGGTAGCCAAAGTTCGACCGATTATAGAGTGCCCTTGGAGAAAGATCCAT
ACGCGGAGGAAGAAGCCCAGAGGCTGAAGAAGTGAGGACTTGGTTGGTTT
ATATGTACACTCAAAGAAGGAAAATGAGGAGATCGG back to topCoding sequence (CDS) from alignment at scaffold_7:889051..890236- >mRNA_3194 ID=mRNA_3194|Name=jgi.p|Nanoce1779_2|584886|organism=Nannochloropsis oceanica|type=CDS|length=1125bp|location=Sequence derived from alignment at scaffold_7:889051..890236- (Nannochloropsis oceanica)
ATGATGCGTGGACGTCCGGCCCTCTCTGCCGTTGTTCTAGCCCGCCGGTG
CCTGGCCTCTCCCCAGCATCTGGCCGCAAAGAGTCAGACGGTGCTAGTGC
CGCATCGTCCAGGCCACCTCAACACCAAACCCACAAAGAGAGCTTTTGCC
ACCACCACCACCGCTGCCGATGTGTCCAACGACAGTAGCACAGATGCGCC
TCCGCCTGCCACGCCACATGCCGCGACTTTCCAAGACCCGCGACAAGAGA
TCCTTGCGGCGGCATTGCCCCTAGTCGCCAAGCATGGTTGGACCGAAGAG
ACCTTGGCAGCTGGTGCTGCCTCACTCGGGTTTCCTGCCGTAGCGCACGG
CATGTTTGGACGGGGTGCCATTGAATTGGTGGAGTACGCTATGGCACAAA
TTGATGCTGCATGGGTCGCCGAGCTTGAGGCGCGTCAAGACGAATTGGCT
TCTTTGCCCTCGTCACGTGAGAGGTTGGAGCGAGCGATTCGATGGCGCCT
GCGATTAATTGCCCCCTATTTAGCACAATGGCCACAAGCCTTGGCGCTAG
GGTTGTCGCCGCACAATTTGGAGACAACCGCACGGGGATTGGCGGAAGTG
GCGGACGAGTTGTGTGTGACCACGGAGAAGGATGAGGGGATGGACTTGAC
AAATTGGTACGCGCATCGCGCCACCGTCTGCTCGGTTTACGTAGCCACGG
AATTATTTTTCCTGACGGATTACTCAGAGGATTATCAGGACACCTGGGCA
TTTTTGGAAAGGCGACTTCGGGATGTTGAGGCTTTGTCGCATGCCCCTAC
CAATGTGCAGGAGGGGGTTCTAGCCTTCCAGACCGCCGCCTCCGCCATGG
CCTCAGCGGTTGCTTCTTTGGCACAGCCTGCCATGATGGGGGCATTGCAA
AAAGTACCATGGACAGGGACAATTGTCGCAGTGATGCATACTGCCTTGGC
TAATCTGGCCGCAATGGCCCCGGCGAGTCCGTCAACTTGTGGGCCCTTCC
AAGAGAAGTGGGATGTAGCGGGGAAAGGAGGGAAGGAAGAGGGTAGCCAA
AGTTCGACCGATTATAGAGTGCCCTTGGAGAAAGATCCATACGCGGAGGA
AGAAGCCCAGAGGCTGAAGAAGTGA back to top
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