Properties
Property Name | Value |
TranscriptId | 399482 |
Track | FilteredModels2 |
ProteinId | 399396 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_7 | supercontig | scaffold_7:837090..840132 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3168 ID=mRNA_3168|Name=jgi.p|Nanoce1779_2|399396|organism=Nannochloropsis oceanica|type=mRNA|length=3043bp GGTGGTCCTATAGGAGGAGGAAGAGGAATGATTGTGGGCGGGCCCAAAAC ACCACCACCACGAGGGTGGGATGGAGGAGGAGGAGTAAGGCGGGGTCCAC CACCTCCTCCTCACCACATGCAGATGCAAGGCTCCCCTCCTCCCCTCCCT CATTACAGCCAACCTCGCCCTCCTCCTCTACCTCGTCACCATCATCCTAA CGGCATGGGCCGAGGTGGACCCCTCCTACCTCCCCACGCTCCCCCGCACC CACCCTCCGTCTCCTCCTCCTCCACCTCCCGTCAACCCCCCATGAATGGT CATAATGGGAGAGATTATCCTCCCCCTCCCTCCCACCCTGCTCCTCCTCC TCTTCCCTCTTCTATGCCACGTCGCCACGGCCCTTCTCCTGATTACGGTG GCCGAGGGGCTCCACCCCCTTCCCCATCCTCTTCCGCCTTCGCGCCCTTG CCTCCCCACCCTCCCCCCTACTACGACAATGGAAGCAGGGGGAGAGGAAG GGAGGGGGTAATGGGTGGAAGGGGGGGAGCGAATCCATTTGGTATGGCAG GACGAGGAGGAGGAATGGGCGGAGGAAGAGATGGGGAGAGAGTTGTTCCT CCTCCCCCTCGTCCTCCCCTCCCACCTGGCCCCCCTCCATCTCACAAGGG AACGAGTGGAGGGAGGGAGGGAGGAGGAGAAGGGTGGGATAGGAAAAGGG ATAGAAGCTGGGAACGGGAGACGGAAAGGGGTCTTGCACCACCCCGAGGA GGAGGACGAGGAGGAGGAGGAGGAGGACGAGGGCCGCCATCCTTGGGAGG ACCGTACGACAGCCCCAACGGCGGCCCACTGCCACCACTCGCAGCAAGGG GAGGGGGGATGAAGGGAGGAAGAGGAGGGCAAATGAACGCCATACGTCCG GGTATACAGGCCTCGCCCATGAACGGACCACCACCACAAGAATCGCCACT CCACCACCCACTAGGCAGGGAGGGAGGGAGGGAAGGAGGAGGGGGGCCAG ATGGCCGCCGGACAATTTTTTTGCTGAATGTTCCCCCCTTCCTAACACCC TCCCTTGTGGGAGACCACTATTCTCGTTTCGGCCATATCGTCAAGATCGT TTTCGAGCCGTTGCTTGGGGGGCCCAATAAGGGGAAAAACAAGGTGTATA TTCAATATGCGTCGCACAGAGAGGCAGAAGCGGCGCAGGTGGCAGTGGAT GTACCGATGGGGAGGACGGGCTTCCGGCCTATCATGGGGTATCACCACTC GAATCTGGTGGAGGCAGGGAGGCAACAGCAGGAGAGGTGGGTGGACAGGA TGGGCAGCAGTGGAGGCGGTGAAGGAGGAGGGAGGGGAGGTGGAATAGAG GGGGCGAGGGGGATGCGGGTAGTGGATAAGCTGGGGGGGATTGCGGGTGA GGTTGGTGGAGGAGGAGGGGCTGGAGGGGACCGAGGACCACCGTTTCCTC CTTTCCCCTCTTCCAGACCTTACACACAGGATCGAGGAGGAGGAGAAGGA GGAGGAGGAGGAAAAGGAGGAGGGTACCCTCCTCCTCCCCGCGGGCCGCC GCCGCCTTCTTCTTTCGCTGGAGGGGTTCCACAAATCAAGCGACCGCGTT ATGATGCCCTCTCTCACCACCACCACCACCACCACCAGCAGCAGCAGCAG CAGCGACTCCCCACACAAGCACAGCTGCAGCAGCAGCCGCGCCCACCTCC GACGGGCCACCCGCAGCAGCCGCCACACCCGCAGCAGCCGCAGAGTCGGT CTCCGTTTCTTCGTCCTCCTCCCAGGGGTGCACCCATCCCATTTGATTCG CGGCCTCCTGCACAGCCACCCCGCCCCAAGCAGCCTCCTAGAGAACAAGC ACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCTCCTCTT CCTCCCCGTCGTCTAACCCTCCTCCTTCCCCTTCCATCGCTCTTTCCACA TCCTCAACCACCGCAACATCCTCCTCCCTCCCTTCCTCATCGACCCACCC CTCCTCCGCCGCCCTCACTCGTCAACGCCTTGAGCTGGCCAAGAAAAAGG AAGCCATGTACAGCACGCAAAAGTCCCTCCACGAAAAACTGGTGGCAGCT GCGGTTGCTACTGCTACTGCGGCAGCAGCAACAGCAAATCCTACTGGTGT TACTACCGAAAACGCAGAGATGGAGAAGGCCAAAAAGGAGCTGTTGGACA CGGAGGTGAAGTTGTTCGAGGCGAGAGAAGAGGTGCGGCGTTTGACGCAG GCGGTAGCACAATTGCATTTGGCAGGAGGAGGGGAAGGAAGAGCTGGGGG AGGGAGGGGAGGAGCAGGGGTGAAAGTGACGACGCATGCCCCTGCAGGAG GAGGGAGGGGTGGAGGGAGGATAGGTGGAAGAGGAGTGGGGGGAGGGAGG GGGGGAGGGTTGCGGATTGACAACCGGACGACGTGCCTGAAGTTGGTGAA CAAACCGCAGGGTGTTGCTCCTGGTTCCCTGCAGAGCTATTTCAATAACT TCGGGACTGTGGAACATGTAAAGGTTCTGGTGGAGGGGAAGGGAGGAGGG GAGGGAGGGGAGGAGTCGGCGGTCGTGAAATTTGTCACGAGAAGGGCGGC CGAGAATGCGAAGGCGAATGCCAAGTACTTGGGCTCACATGCGTTGGTGT TGCAATGGCATGATGCTTCAGCTGCTGCTGCTCCTCCTCCTTTATCAACG ACAATGAACGAAGCGACGACGGCTGTTGGTGTTGCTGCTCCCGTTGTTGA GGGAGAGGGGGGGGAAGGGGAGGTGGGAGAAGGAGCAGGGCAGGGAGGAG AGGAGGGGGAAGAGGGGGGAGTAAGTCTCTTGGAGCAGGAGGAGGATTTG GATGCGCTTTTTTCTTAATAACGAGGAGAGGAAAGGAGGTCAAGAAGAAA AATGCGCTTTCTTTAGAGAAAAGGGTGGTAAGGAGAAGGAAGCCCTGGAC TTGGAGCGAGTCCGGAGGGGGGGAGGGAGGGAAGGAGAGAGGGAAGACGC GGACTGCGACAGATAATGCCCAAAGAATATAAATAGAAAGAGA back to topprotein sequence of jgi.p|Nanoce1779_2|399396 >mRNA_3168-protein ID=mRNA_3168-protein|Name=jgi.p|Nanoce1779_2|399396|organism=Nannochloropsis oceanica|type=polypeptide|length=947bp MIVGGPKTPPPRGWDGGGGVRRGPPPPPHHMQMQGSPPPLPHYSQPRPPP LPRHHHPNGMGRGGPLLPPHAPPHPPSVSSSSTSRQPPMNGHNGRDYPPP PSHPAPPPLPSSMPRRHGPSPDYGGRGAPPPSPSSSAFAPLPPHPPPYYD NGSRGRGREGVMGGRGGANPFGMAGRGGGMGGGRDGERVVPPPPRPPLPP GPPPSHKGTSGGREGGGEGWDRKRDRSWERETERGLAPPRGGGRGGGGGG RGPPSLGGPYDSPNGGPLPPLAARGGGMKGGRGGQMNAIRPGIQASPMNG PPPQESPLHHPLGREGGREGGGGPDGRRTIFLLNVPPFLTPSLVGDHYSR FGHIVKIVFEPLLGGPNKGKNKVYIQYASHREAEAAQVAVDVPMGRTGFR PIMGYHHSNLVEAGRQQQERWVDRMGSSGGGEGGGRGGGIEGARGMRVVD KLGGIAGEVGGGGGAGGDRGPPFPPFPSSRPYTQDRGGGEGGGGGKGGGY PPPPRGPPPPSSFAGGVPQIKRPRYDALSHHHHHHHQQQQQQRLPTQAQL QQQPRPPPTGHPQQPPHPQQPQSRSPFLRPPPRGAPIPFDSRPPAQPPRP KQPPREQAPQQQQQQQQQQQPSSSSSPSSNPPPSPSIALSTSSTTATSSS LPSSSTHPSSAALTRQRLELAKKKEAMYSTQKSLHEKLVAAAVATATAAA ATANPTGVTTENAEMEKAKKELLDTEVKLFEAREEVRRLTQAVAQLHLAG GGEGRAGGGRGGAGVKVTTHAPAGGGRGGGRIGGRGVGGGRGGGLRIDNR TTCLKLVNKPQGVAPGSLQSYFNNFGTVEHVKVLVEGKGGGEGGEESAVV KFVTRRAAENAKANAKYLGSHALVLQWHDASAAAAPPPLSTTMNEATTAV GVAAPVVEGEGGEGEVGEGAGQGGEEGEEGGVSLLEQEEDLDALFS* back to topmRNA from alignment at scaffold_7:837090..840132- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3168 ID=mRNA_3168|Name=jgi.p|Nanoce1779_2|399396|organism=Nannochloropsis oceanica|type=mRNA|length=3043bp|location=Sequence derived from alignment at scaffold_7:837090..840132- (Nannochloropsis oceanica) GGTGGTCCTATAGGAGGAGGAAGAGGAATGATTGTGGGCGGGCCCAAAAC
ACCACCACCACGAGGGTGGGATGGAGGAGGAGGAGTAAGGCGGGGTCCAC
CACCTCCTCCTCACCACATGCAGATGCAAGGCTCCCCTCCTCCCCTCCCT
CATTACAGCCAACCTCGCCCTCCTCCTCTACCTCGTCACCATCATCCTAA
CGGCATGGGCCGAGGTGGACCCCTCCTACCTCCCCACGCTCCCCCGCACC
CACCCTCCGTCTCCTCCTCCTCCACCTCCCGTCAACCCCCCATGAATGGT
CATAATGGGAGAGATTATCCTCCCCCTCCCTCCCACCCTGCTCCTCCTCC
TCTTCCCTCTTCTATGCCACGTCGCCACGGCCCTTCTCCTGATTACGGTG
GCCGAGGGGCTCCACCCCCTTCCCCATCCTCTTCCGCCTTCGCGCCCTTG
CCTCCCCACCCTCCCCCCTACTACGACAATGGAAGCAGGGGGAGAGGAAG
GGAGGGGGTAATGGGTGGAAGGGGGGGAGCGAATCCATTTGGTATGGCAG
GACGAGGAGGAGGAATGGGCGGAGGAAGAGATGGGGAGAGAGTTGTTCCT
CCTCCCCCTCGTCCTCCCCTCCCACCTGGCCCCCCTCCATCTCACAAGGG
AACGAGTGGAGGGAGGGAGGGAGGAGGAGAAGGGTGGGATAGGAAAAGGG
ATAGAAGCTGGGAACGGGAGACGGAAAGGGGTCTTGCACCACCCCGAGGA
GGAGGACGAGGAGGAGGAGGAGGAGGACGAGGGCCGCCATCCTTGGGAGG
ACCGTACGACAGCCCCAACGGCGGCCCACTGCCACCACTCGCAGCAAGGG
GAGGGGGGATGAAGGGAGGAAGAGGAGGGCAAATGAACGCCATACGTCCG
GGTATACAGGCCTCGCCCATGAACGGACCACCACCACAAGAATCGCCACT
CCACCACCCACTAGGCAGGGAGGGAGGGAGGGAAGGAGGAGGGGGGCCAG
ATGGCCGCCGGACAATTTTTTTGCTGAATGTTCCCCCCTTCCTAACACCC
TCCCTTGTGGGAGACCACTATTCTCGTTTCGGCCATATCGTCAAGATCGT
TTTCGAGCCGTTGCTTGGGGGGCCCAATAAGGGGAAAAACAAGGTGTATA
TTCAATATGCGTCGCACAGAGAGGCAGAAGCGGCGCAGGTGGCAGTGGAT
GTACCGATGGGGAGGACGGGCTTCCGGCCTATCATGGGGTATCACCACTC
GAATCTGGTGGAGGCAGGGAGGCAACAGCAGGAGAGGTGGGTGGACAGGA
TGGGCAGCAGTGGAGGCGGTGAAGGAGGAGGGAGGGGAGGTGGAATAGAG
GGGGCGAGGGGGATGCGGGTAGTGGATAAGCTGGGGGGGATTGCGGGTGA
GGTTGGTGGAGGAGGAGGGGCTGGAGGGGACCGAGGACCACCGTTTCCTC
CTTTCCCCTCTTCCAGACCTTACACACAGGATCGAGGAGGAGGAGAAGGA
GGAGGAGGAGGAAAAGGAGGAGGGTACCCTCCTCCTCCCCGCGGGCCGCC
GCCGCCTTCTTCTTTCGCTGGAGGGGTTCCACAAATCAAGCGACCGCGTT
ATGATGCCCTCTCTCACCACCACCACCACCACCACCAGCAGCAGCAGCAG
CAGCGACTCCCCACACAAGCACAGCTGCAGCAGCAGCCGCGCCCACCTCC
GACGGGCCACCCGCAGCAGCCGCCACACCCGCAGCAGCCGCAGAGTCGGT
CTCCGTTTCTTCGTCCTCCTCCCAGGGGTGCACCCATCCCATTTGATTCG
CGGCCTCCTGCACAGCCACCCCGCCCCAAGCAGCCTCCTAGAGAACAAGC
ACCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACCCTCCTCCTCTT
CCTCCCCGTCGTCTAACCCTCCTCCTTCCCCTTCCATCGCTCTTTCCACA
TCCTCAACCACCGCAACATCCTCCTCCCTCCCTTCCTCATCGACCCACCC
CTCCTCCGCCGCCCTCACTCGTCAACGCCTTGAGCTGGCCAAGAAAAAGG
AAGCCATGTACAGCACGCAAAAGTCCCTCCACGAAAAACTGGTGGCAGCT
GCGGTTGCTACTGCTACTGCGGCAGCAGCAACAGCAAATCCTACTGGTGT
TACTACCGAAAACGCAGAGATGGAGAAGGCCAAAAAGGAGCTGTTGGACA
CGGAGGTGAAGTTGTTCGAGGCGAGAGAAGAGGTGCGGCGTTTGACGCAG
GCGGTAGCACAATTGCATTTGGCAGGAGGAGGGGAAGGAAGAGCTGGGGG
AGGGAGGGGAGGAGCAGGGGTGAAAGTGACGACGCATGCCCCTGCAGGAG
GAGGGAGGGGTGGAGGGAGGATAGGTGGAAGAGGAGTGGGGGGAGGGAGG
GGGGGAGGGTTGCGGATTGACAACCGGACGACGTGCCTGAAGTTGGTGAA
CAAACCGCAGGGTGTTGCTCCTGGTTCCCTGCAGAGCTATTTCAATAACT
TCGGGACTGTGGAACATGTAAAGGTTCTGGTGGAGGGGAAGGGAGGAGGG
GAGGGAGGGGAGGAGTCGGCGGTCGTGAAATTTGTCACGAGAAGGGCGGC
CGAGAATGCGAAGGCGAATGCCAAGTACTTGGGCTCACATGCGTTGGTGT
TGCAATGGCATGATGCTTCAGCTGCTGCTGCTCCTCCTCCTTTATCAACG
ACAATGAACGAAGCGACGACGGCTGTTGGTGTTGCTGCTCCCGTTGTTGA
GGGAGAGGGGGGGGAAGGGGAGGTGGGAGAAGGAGCAGGGCAGGGAGGAG
AGGAGGGGGAAGAGGGGGGAGTAAGTCTCTTGGAGCAGGAGGAGGATTTG
GATGCGCTTTTTTCTTAATAACGAGGAGAGGAAAGGAGGTCAAGAAGAAA
AATGCGCTTTCTTTAGAGAAAAGGGTGGTAAGGAGAAGGAAGCCCTGGAC
TTGGAGCGAGTCCGGAGGGGGGGAGGGAGGGAAGGAGAGAGGGAAGACGC
GGACTGCGACAGATAATGCCCAAAGAATATAAATAGAAAGAGA back to topCoding sequence (CDS) from alignment at scaffold_7:837090..840132- >mRNA_3168 ID=mRNA_3168|Name=jgi.p|Nanoce1779_2|399396|organism=Nannochloropsis oceanica|type=CDS|length=2841bp|location=Sequence derived from alignment at scaffold_7:837090..840132- (Nannochloropsis oceanica) ATGATTGTGGGCGGGCCCAAAACACCACCACCACGAGGGTGGGATGGAGG AGGAGGAGTAAGGCGGGGTCCACCACCTCCTCCTCACCACATGCAGATGC AAGGCTCCCCTCCTCCCCTCCCTCATTACAGCCAACCTCGCCCTCCTCCT CTACCTCGTCACCATCATCCTAACGGCATGGGCCGAGGTGGACCCCTCCT ACCTCCCCACGCTCCCCCGCACCCACCCTCCGTCTCCTCCTCCTCCACCT CCCGTCAACCCCCCATGAATGGTCATAATGGGAGAGATTATCCTCCCCCT CCCTCCCACCCTGCTCCTCCTCCTCTTCCCTCTTCTATGCCACGTCGCCA CGGCCCTTCTCCTGATTACGGTGGCCGAGGGGCTCCACCCCCTTCCCCAT CCTCTTCCGCCTTCGCGCCCTTGCCTCCCCACCCTCCCCCCTACTACGAC AATGGAAGCAGGGGGAGAGGAAGGGAGGGGGTAATGGGTGGAAGGGGGGG AGCGAATCCATTTGGTATGGCAGGACGAGGAGGAGGAATGGGCGGAGGAA GAGATGGGGAGAGAGTTGTTCCTCCTCCCCCTCGTCCTCCCCTCCCACCT GGCCCCCCTCCATCTCACAAGGGAACGAGTGGAGGGAGGGAGGGAGGAGG AGAAGGGTGGGATAGGAAAAGGGATAGAAGCTGGGAACGGGAGACGGAAA GGGGTCTTGCACCACCCCGAGGAGGAGGACGAGGAGGAGGAGGAGGAGGA CGAGGGCCGCCATCCTTGGGAGGACCGTACGACAGCCCCAACGGCGGCCC ACTGCCACCACTCGCAGCAAGGGGAGGGGGGATGAAGGGAGGAAGAGGAG GGCAAATGAACGCCATACGTCCGGGTATACAGGCCTCGCCCATGAACGGA CCACCACCACAAGAATCGCCACTCCACCACCCACTAGGCAGGGAGGGAGG GAGGGAAGGAGGAGGGGGGCCAGATGGCCGCCGGACAATTTTTTTGCTGA ATGTTCCCCCCTTCCTAACACCCTCCCTTGTGGGAGACCACTATTCTCGT TTCGGCCATATCGTCAAGATCGTTTTCGAGCCGTTGCTTGGGGGGCCCAA TAAGGGGAAAAACAAGGTGTATATTCAATATGCGTCGCACAGAGAGGCAG AAGCGGCGCAGGTGGCAGTGGATGTACCGATGGGGAGGACGGGCTTCCGG CCTATCATGGGGTATCACCACTCGAATCTGGTGGAGGCAGGGAGGCAACA GCAGGAGAGGTGGGTGGACAGGATGGGCAGCAGTGGAGGCGGTGAAGGAG GAGGGAGGGGAGGTGGAATAGAGGGGGCGAGGGGGATGCGGGTAGTGGAT AAGCTGGGGGGGATTGCGGGTGAGGTTGGTGGAGGAGGAGGGGCTGGAGG GGACCGAGGACCACCGTTTCCTCCTTTCCCCTCTTCCAGACCTTACACAC AGGATCGAGGAGGAGGAGAAGGAGGAGGAGGAGGAAAAGGAGGAGGGTAC CCTCCTCCTCCCCGCGGGCCGCCGCCGCCTTCTTCTTTCGCTGGAGGGGT TCCACAAATCAAGCGACCGCGTTATGATGCCCTCTCTCACCACCACCACC ACCACCACCAGCAGCAGCAGCAGCAGCGACTCCCCACACAAGCACAGCTG CAGCAGCAGCCGCGCCCACCTCCGACGGGCCACCCGCAGCAGCCGCCACA CCCGCAGCAGCCGCAGAGTCGGTCTCCGTTTCTTCGTCCTCCTCCCAGGG GTGCACCCATCCCATTTGATTCGCGGCCTCCTGCACAGCCACCCCGCCCC AAGCAGCCTCCTAGAGAACAAGCACCGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAACCCTCCTCCTCTTCCTCCCCGTCGTCTAACCCTCCTCCTT CCCCTTCCATCGCTCTTTCCACATCCTCAACCACCGCAACATCCTCCTCC CTCCCTTCCTCATCGACCCACCCCTCCTCCGCCGCCCTCACTCGTCAACG CCTTGAGCTGGCCAAGAAAAAGGAAGCCATGTACAGCACGCAAAAGTCCC TCCACGAAAAACTGGTGGCAGCTGCGGTTGCTACTGCTACTGCGGCAGCA GCAACAGCAAATCCTACTGGTGTTACTACCGAAAACGCAGAGATGGAGAA GGCCAAAAAGGAGCTGTTGGACACGGAGGTGAAGTTGTTCGAGGCGAGAG AAGAGGTGCGGCGTTTGACGCAGGCGGTAGCACAATTGCATTTGGCAGGA GGAGGGGAAGGAAGAGCTGGGGGAGGGAGGGGAGGAGCAGGGGTGAAAGT GACGACGCATGCCCCTGCAGGAGGAGGGAGGGGTGGAGGGAGGATAGGTG GAAGAGGAGTGGGGGGAGGGAGGGGGGGAGGGTTGCGGATTGACAACCGG ACGACGTGCCTGAAGTTGGTGAACAAACCGCAGGGTGTTGCTCCTGGTTC CCTGCAGAGCTATTTCAATAACTTCGGGACTGTGGAACATGTAAAGGTTC TGGTGGAGGGGAAGGGAGGAGGGGAGGGAGGGGAGGAGTCGGCGGTCGTG AAATTTGTCACGAGAAGGGCGGCCGAGAATGCGAAGGCGAATGCCAAGTA CTTGGGCTCACATGCGTTGGTGTTGCAATGGCATGATGCTTCAGCTGCTG CTGCTCCTCCTCCTTTATCAACGACAATGAACGAAGCGACGACGGCTGTT GGTGTTGCTGCTCCCGTTGTTGAGGGAGAGGGGGGGGAAGGGGAGGTGGG AGAAGGAGCAGGGCAGGGAGGAGAGGAGGGGGAAGAGGGGGGAGTAAGTC TCTTGGAGCAGGAGGAGGATTTGGATGCGCTTTTTTCTTAA back to top
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