jgi.p|Nanoce1779_2|629396, mRNA_3142 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|629396
Unique Name	mRNA_3142
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	6233
Alignment location	scaffold_7:753241..759473 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	629482
Track	FilteredModels2
ProteinId	629396

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:753241..759473 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|629396	gene_3142	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|629396	mRNA_3142-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3142	CDS_3142	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_7:753241..759473-
coding sequence from alignment at scaffold_7:753241..759473-

mRNA sequence

>mRNA_3142 ID=mRNA_3142|Name=jgi.p|Nanoce1779_2|629396|organism=Nannochloropsis oceanica|type=mRNA|length=6233bp
CCTACGTTTTCATGAAACTCCGTCATTGTTTACCTATGTGTACATAGATG
TGCCACGTCGTCCACATTACGCACTCACCCACGTACGGCTACCCATTCCT
TCTCTCTCTCTTCGAAGGGATGGCCCGTCTTCGCCTAAACGTCTACGAGG
CGGCAACGAGGACGCCAAGCAAAGACATTACCGTCGCCTGGCCCATCGGT
CAAGGAGCATCCACACCCACTCAAGCCCTCTTCTCCTCGCTCCAAGCTCT
GGTCCACTCCCACACAGGCCTTGAGCCCTGCAATCAGCTTATCTTGTACG
GCGATGTCGCTTACCCTATCAGAGACGATGCGGACGTGGAAGCTCTTATG
CTACCCGCGGGAGATCCAGAGGACGGTTCCTTTCCCGTAACCTCGGCCAC
GCAGCAGGCTTTTATCAGTGTGCTGCCCGCAAGTCTCTTGCGGGCCAGCA
TCCAGGACGGCTGTTCTCGCGTCTACTTCGGAGAGCGCGCCGTAGTCCAG
CCGTGCTACGTGATTCCGGGGAGCGATCAGAGCGTGTGTGAGACTTGTCA
AGCGCTCTGTTTTCCCGAAGGGTTGCTGCTGGCCAAAGTGGGTGCGCCCA
TGGAACCCTTTGTGTGTGGTGCGCCAGCCCTGTGTTCCGAAGGCCTGGGT
GTATACCTTTTCAAAGAACGCTTGCATGAGGCCAACACCATTTGGGGTGG
AGAAGGAGAGAAGGAAGGTGAGGCGACCAGAACCATTCAAGCCGAGGAAT
CACGAAATTCCTGCGCCACGACCCACAAAGCTTTCATGCTCTCACCACCA
GCTTTGGCCTTGCTTGCGACCTTTCGTCAAGCCGCATATGTTCAGCAAGC
TTTGGGTTTTGACCAGTATAGTCGGGAAGCGGCGGAAATGATGGCTCGAT
TGCAAAGCGGCAGGAGCACCATTTTGGCTTACGATGCTCCGGCGTTGAAG
AACAAGGCGTTGTCCACCATCCCCACGGCCGCGCTGCACGCGCGGGCCAT
GATGGCAGGAGGTGATCCACAGCGGAATCCTCTCCACTTTCAGGATATCT
TGCTGCGGGAGCTGCTGGCCTGGTTTAAGCACGATTTTTTTTCATGGGTC
AACAATCCCCCTTGCGAACGCTGTGGAGCGACCGATACAACCTTGTTGGG
TGGAGCAGCTCCGACACCTGCGGAATCCGCGGGCAAGGCCGGTCGCGTGG
AAGTATATACTTGTGAGTCGTGTCAAGCTCAGACCCGCTTTCCAAGGTAT
AACGATCCGGGGGTGCTGCTGGCCACTCGGCGAGGACGTTGTGGTGAGTG
GGCAAATTGTTTCACCTTGTGCTGTGTTGCGCTTGGATTTGAGGCGCGAT
ATGTGATGGACTGGACGGACCATGTTTGGACCGAGGTATGGTCGCCCTTA
GAAGGGCGCTTTCTTCACTTAGACCCGTGTGAGAATGCAGCTGACACCCC
TTTGATGTATGAGGGTGGGTGGGGAAAGAAACTTTCTTATGTCGTGGCTT
TTGGTAAGGATCATTGCGTGGACGTGACTCGGCGCTACACCCGCACCTTC
GAGAGTCAGCTCTTGAGCCGTCGACAGAACGTTCCTGAGCTTGTACTGGC
GCAGCAAGTGGCAGCCTTGAACCAGCAGTTGCGCAATAACAACAGTAGCG
GGCGATCAGTTCAGGAACGGGCGCGCCGAGAACAATTTGAATTACATTCT
CACACCGTATTGGGCGAGGCCAGTGAATTAGTATACATCAAGCCTGGCGA
GCTGCGGGGGAGGATCTCGGGGAATGCAGCGTGGAAGCGCGCGCGAGGGG
AAGATGGCTTGGGTGAGCCTGGGAGGGAGCTGGAATGTGGGGGCGCAGAG
ACTCCATGCGCCTCGTCGCTCGCTGCGACGTGTGCAGTACCTCCGGCACA
AATCGAGAGAAAGGCCAGTGAGCCTATGATTCAGCGGGAGGAAATGGCAG
GGTTGCCCTTGTGGTCGTATGTAGCGGGTGGCGGGTCTTTGCTAGTATCG
GCCACTTCAGTCGGATCGCTAAAGGGAGAGTCTCTCACGCTGCTCGGCAG
TTACGGAGGTTTCGGTCCAGGGGCAGTCACCATTAACGGACTGCCCGTGG
CTGTGGGTCGACGAGGCCTGAATGTGGTGGTACTGGACTTAGTCCGGAGT
GTCATTGAGCAGAGCGTGGCTTTTGATGTGCCAGAAGACGGAGATGGCGA
CGCGGTTGATGATGACACTAGGGTTGTCGCCATTGCCTTCCTTCGCGAGA
AACTGGCACAGGGTATGGTGGTGGTGGCTGTCATATTGGGATCTGGTGCG
CACGCGCTGTGTCAGGCGGGGGCAGACCTCTGGAAGGATGCCTTCGGAAG
CCCACGCAAGATTCCTGGTCGGAGCGAGCCGTGGCTGGTCATAACAGGAG
GATCAACAGATGCTTGGGTGACGGCCGAGACGCGTGCCGCCGGTCAAGGA
CCGCTGAAGGTTATCGTGACAATGCCCTTGTCTCCTATTCACCCGTCAAT
TACATCTACACCTAGTCCCGATATGAAAGTGTGGCACGATGCCATTGCTG
CAGTGCCTCTTGTGCACTCGATGGGAGCCCAGGGCGACGGTGTTTTGAGC
GTACCGCCGCTGGAGGCTTATCAAGCAATGTGCACTGCTTTTTCTCAGGC
GCCTCTGGCAGGATTTTCTTACAAGGCTGAATGTGGCCTCATGGGGATGG
CGTGGACGAGCGGATTGCGGGGCGGAGCCGGTTGGAGGACGCACCAAGTG
TCTTCACCGATGTTGGCGCCTGATGGAGAGGGTTTAAAGGTGCGAATTCA
TAAGGCGTTCACTAAGCTTGTCGCGGATGGAATGACTCCGAATATGGCAG
CTCTACAGGCCCTGTCCCACATTAAGGAGACGATGCTGCAAGAGAAGCAG
CAAGCTTCGGCCAGTGTTACCAGATTCAAGGTTGTCTATGGCCCGTTGAT
CGGGACCTCCGTACACCCGCCGCTCAGTGAGACTCTGCACGTGTTTGATG
ATTCTGAGATAGCTACACCTGTCCAGGCCATGGCAGAATGGCAGGAAAGC
TTTCCACTTCTAATAATGCGGCGCGTGCGCATCTGGACTTCGCCGCGCGG
TATGTTAGGACTTCAGGCAGGCTATCAGCCTCAGGGTTCCGCTGATTCAC
CTATTTATTGGGCTCCCGTGCATCACCCTTCATCGAAATCGCCGTCGTCT
GCCTTCGTCAATGAGGAAGTCACTGGTACCCTAGTACTAGGTCGCGAGGA
AAATTTGGTAATGGTTGGTATACACACCAGCGATGCTTGCATTCTTGGCG
TGAATTTTACGACGACTGCACAGCGATCGATTTTCTTCGGCTTATCCGAT
CCCAGCGGCACTGCCACAACCAGCTTATCGGTGCCGCGCGGCATGGAAAT
TGTTGCATTTTATGGTATTATGGGCGGGGAGGGCATGCAACGTTTGGGCA
TTGTCTCAAGGAGGCAAGTTTCAAAATCCTGGGGAAACCTGTCTTTGCCT
GCGGACGCCTGGGGCATTTATACTGCCTGCCCAGTCGACCGTGCAAGTCG
ACAGCTTCTGTACTGGAGTGGAGGGGAGAAGATCAAGGTGGTGGCAGCAT
TGCGTGCAGCTCGTCGTTACCTGGAAAATTGCCTCAAGGACCCGAGCAAT
ACGACATTCCGGCTCATTCGCGTCCGAAGCAAATTCTTCCTGGACAATAT
TGGGAGCTTGCCGGGGTCGGGCAGCTTGATGCAAGCTTTGGGATTTGAGC
ACGTAGCGGCAATTGCCACTGTAGCGGCAAAGACGGAGGGACATGAGCCA
GAGGAAGAGGCGTGTTACATGCTTCCTTTGCCCAATGTGGCCCCCTCGAC
GCTCCTCTATTCTGTCAAGCGCCTTGACACAAACTTAACGAGGATAATGG
CGGAAATGAATTCTACGACAGCGGTATGAGAAGTGTAGAGCACTAGTACA
TCGAAGAAAAGTATGCCATATTGTTGGCACTACCATCATCGCTGTTGCGT
TGGGATTTCCTTTTTTATTGTGTGGGGTGACTGTCGGGCCAAGGTGGGGG
AGGTTGACTTTTGCAACGACACGCCAACCTCACTCTCGTCCAAAGCCGTG
CAGGTACTGCTATTATTTTTCGTATGAACAATGCGCCTCTTATACAAGCT
TATGAGATTGAAAGAGCCGTTCCTGAGACGTTGTTGTTTTCGTTGGCGAG
TCGGTAATGGAAATAATAATAATGAGAGTGAGAAGCACTGCGCTTGCCAC
TTCCACCACAGCCCGCGGTCATGCAAACTCGCCAAGCCCCTCCACTCACT
CTTATATTTGTTCCACGCTACCACCCGACACCGTGCCTTCAATTACAGGT
CGCTCCTCTCTGCCCTGTGTTTTTCCTTTTCTTGATTTCATGGCGACGGT
GGGTGCAGCAGCCACGGCGGCATCCCGGGCCGAGGTTTTGCATGAGAGCC
TAGACCTGCGCGTGGACTTGGAGAAGCGTGAAGTTAAGGGTCATGCCACC
GTCTGGGTGCTGTTGCCGCCCTTACCTGCGGGAGATTTGGGGACGGTTGA
CGAGGGCGTTATGGAATACCGGCTGCATGCCCGACAGATGGAAATCCACG
AGGTCAAAGTGAATGACATGCCGGCCTCCTACATGTACCCGCACCCCGTC
GACCTCCTTCGTGATTTTGTTCCACCCGGGAGCGAAGACATTGATGACAG
GGAGAAGAGTGGCTCGTCTGCGCGAATGGACGGGGAGGCCTTGGACCTTC
ACTACCGATGTCAACTCATTGCTTCGCAGGAGGGTGAGCTTAGCCTACAA
CTGCCCAAGCGACAATCATGGAGGCCACCGCCGTCCGACGTCCAAGAGGA
AGGCGACGAAACTGTCAAAAATATTCCACAAGTGGTCCTGAATGCCGGCA
TAGCTGCCCTCCGGATTTGCAAGATCGAGATTGATTACAGGTTGCAGAAT
CCTGTGGCTGGCCTGCGTTTTGATAGTCATCCTGCCCATGCCTATAGCAT
GCGTTGTCCCAGCGTCCTGCACGATTTTGATGGGCCCCGATGTTGGTTCC
CTTGCGCCGACCGCACTACGGACATTTTTACTCTGGACATGGTGGTAGCG
GTTGTTTCTCCAGCGTCGTCGAATAGAGGGGAGGTTGGGAATGGGGACAC
CGAGGCTAATGACCGAGAGGGCAATCATGTAGGAAAGGTTGACATTGTGA
ACGACAGTGGTACCAACAGTAGTAGTAGAGCAAGCACCACAATTAGCAAC
AGCAGCACAGCCATCAACAGAGATGAGGAGCATCCAGTAGTAGTGCTGGT
TGGAGGTGGGCAGCTTTTGGGGAAGGAGAGAAAGGTGGCGGACGGGACTG
TAGTGTGGCGTTATGCAATAGAAACACCCATTACGGCATCAGCTGTCTCG
CTGGTTGTGGGTCACTTTGGGAAGTATGTGGATCCGGGCGTGCCTCGATT
GACTCACCATTATCTGCTGCGGGAGGAGCGACGAGCAGCAACCTTCAAAG
CTTCCAATGGAAGAAATAGCCTTCCAACAATAGAGAAGCCATTGCCACCA
CCACCGCCACCACGATCGTGGGTAAGTCACAGCGTGGAGGGCATGGGTCC
GGCTATGAGCTTTCTGGCGGATTTCTTTCACCTCGCTCCAGGCGGCGGAG
AAGCAGCAACAGGCAGTGCCCCTACCCCTTCTGTCGTAGTTCCTTACCTC
GAGCACCGAATTGTGTTCGTCAAGGGCCTACCTGAGGCCAGTATGGCTTT
CCACGGCCTCTCCTTGCATAGGGTAGAGGACGTGCACCCTCCTCGTGTGT
TCGACCACTCCATGACCTTTCACCTCGCTCTCGCCGAGGGCCTCTTCGCG
TCTTGGCTTCTCCCTCGAGTTCGTCCCCGCTTCACCCGCGACCGTTGGAT
CTATCACGGCGTGTTAGGATATCTCGTCCTAATGTACGTACGGCGGCGAT
ACGGCGAGCATGAATACCGATATCGTCTGCTGAGATTGATGGATGCAGTC
ACAGCTTTGGAACGCTCGGGGCAAAGCACGCCATTACTGCCTCCAGACTC
AGTCCTTTTGGCGAGTGAGATATACAGTCCTGCTAGCTTGGAATTGGTGC
GAGTCAAGCCTCCAGTGATTATGCATATGATTGAACAGCGTGTCGGCCGC
AAATCTTTGCGAGATGTCCTGCGCTCCGTGGCGTGCCCCACGCCCGTCGT
GTCGGCAATACCAGCAGCAGCAAGTGGAGGAGG

protein sequence of jgi.p|Nanoce1779_2|629396

>mRNA_3142-protein ID=mRNA_3142-protein|Name=jgi.p|Nanoce1779_2|629396|organism=Nannochloropsis oceanica|type=polypeptide|length=1294bp
MCHVVHITHSPTYGYPFLLSLFEGMARLRLNVYEAATRTPSKDITVAWPI
GQGASTPTQALFSSLQALVHSHTGLEPCNQLILYGDVAYPIRDDADVEAL
MLPAGDPEDGSFPVTSATQQAFISVLPASLLRASIQDGCSRVYFGERAVV
QPCYVIPGSDQSVCETCQALCFPEGLLLAKVGAPMEPFVCGAPALCSEGL
GVYLFKERLHEANTIWGGEGEKEGEATRTIQAEESRNSCATTHKAFMLSP
PALALLATFRQAAYVQQALGFDQYSREAAEMMARLQSGRSTILAYDAPAL
KNKALSTIPTAALHARAMMAGGDPQRNPLHFQDILLRELLAWFKHDFFSW
VNNPPCERCGATDTTLLGGAAPTPAESAGKAGRVEVYTCESCQAQTRFPR
YNDPGVLLATRRGRCGEWANCFTLCCVALGFEARYVMDWTDHVWTEVWSP
LEGRFLHLDPCENAADTPLMYEGGWGKKLSYVVAFGKDHCVDVTRRYTRT
FESQLLSRRQNVPELVLAQQVAALNQQLRNNNSSGRSVQERARREQFELH
SHTVLGEASELVYIKPGELRGRISGNAAWKRARGEDGLGEPGRELECGGA
ETPCASSLAATCAVPPAQIERKASEPMIQREEMAGLPLWSYVAGGGSLLV
SATSVGSLKGESLTLLGSYGGFGPGAVTINGLPVAVGRRGLNVVVLDLVR
SVIEQSVAFDVPEDGDGDAVDDDTRVVAIAFLREKLAQGMVVVAVILGSG
AHALCQAGADLWKDAFGSPRKIPGRSEPWLVITGGSTDAWVTAETRAAGQ
GPLKVIVTMPLSPIHPSITSTPSPDMKVWHDAIAAVPLVHSMGAQGDGVL
SVPPLEAYQAMCTAFSQAPLAGFSYKAECGLMGMAWTSGLRGGAGWRTHQ
VSSPMLAPDGEGLKVRIHKAFTKLVADGMTPNMAALQALSHIKETMLQEK
QQASASVTRFKVVYGPLIGTSVHPPLSETLHVFDDSEIATPVQAMAEWQE
SFPLLIMRRVRIWTSPRGMLGLQAGYQPQGSADSPIYWAPVHHPSSKSPS
SAFVNEEVTGTLVLGREENLVMVGIHTSDACILGVNFTTTAQRSIFFGLS
DPSGTATTSLSVPRGMEIVAFYGIMGGEGMQRLGIVSRRQVSKSWGNLSL
PADAWGIYTACPVDRASRQLLYWSGGEKIKVVAALRAARRYLENCLKDPS
NTTFRLIRVRSKFFLDNIGSLPGSGSLMQALGFEHVAAIATVAAKTEGHE
PEEEACYMLPLPNVAPSTLLYSVKRLDTNLTRIMAEMNSTTAV*

mRNA from alignment at scaffold_7:753241..759473-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3142 ID=mRNA_3142|Name=jgi.p|Nanoce1779_2|629396|organism=Nannochloropsis oceanica|type=mRNA|length=6233bp|location=Sequence derived from alignment at scaffold_7:753241..759473- (Nannochloropsis oceanica)
CCTACGTTTTCATGAAACTCCGTCATTGTTTACCTATGTGTACATAGATG
TGCCACGTCGTCCACATTACGCACTCACCCACGTACGGCTACCCATTCCT
TCTCTCTCTCTTCGAAGGGATGGCCCGTCTTCGCCTAAACGTCTACGAGG
CGGCAACGAGGACGCCAAGCAAAGACATTACCGTCGCCTGGCCCATCGGT
CAAGGAGCATCCACACCCACTCAAGCCCTCTTCTCCTCGCTCCAAGCTCT
GGTCCACTCCCACACAGGCCTTGAGCCCTGCAATCAGCTTATCTTGTACG
GCGATGTCGCTTACCCTATCAGAGACGATGCGGACGTGGAAGCTCTTATG
CTACCCGCGGGAGATCCAGAGGACGGTTCCTTTCCCGTAACCTCGGCCAC
GCAGCAGGCTTTTATCAGTGTGCTGCCCGCAAGTCTCTTGCGGGCCAGCA
TCCAGGACGGCTGTTCTCGCGTCTACTTCGGAGAGCGCGCCGTAGTCCAG
CCGTGCTACGTGATTCCGGGGAGCGATCAGAGCGTGTGTGAGACTTGTCA
AGCGCTCTGTTTTCCCGAAGGGTTGCTGCTGGCCAAAGTGGGTGCGCCCA
TGGAACCCTTTGTGTGTGGTGCGCCAGCCCTGTGTTCCGAAGGCCTGGGT
GTATACCTTTTCAAAGAACGCTTGCATGAGGCCAACACCATTTGGGGTGG
AGAAGGAGAGAAGGAAGGTGAGGCGACCAGAACCATTCAAGCCGAGGAAT
CACGAAATTCCTGCGCCACGACCCACAAAGCTTTCATGCTCTCACCACCA
GCTTTGGCCTTGCTTGCGACCTTTCGTCAAGCCGCATATGTTCAGCAAGC
TTTGGGTTTTGACCAGTATAGTCGGGAAGCGGCGGAAATGATGGCTCGAT
TGCAAAGCGGCAGGAGCACCATTTTGGCTTACGATGCTCCGGCGTTGAAG
AACAAGGCGTTGTCCACCATCCCCACGGCCGCGCTGCACGCGCGGGCCAT
GATGGCAGGAGGTGATCCACAGCGGAATCCTCTCCACTTTCAGGATATCT
TGCTGCGGGAGCTGCTGGCCTGGTTTAAGCACGATTTTTTTTCATGGGTC
AACAATCCCCCTTGCGAACGCTGTGGAGCGACCGATACAACCTTGTTGGG
TGGAGCAGCTCCGACACCTGCGGAATCCGCGGGCAAGGCCGGTCGCGTGG
AAGTATATACTTGTGAGTCGTGTCAAGCTCAGACCCGCTTTCCAAGGTAT
AACGATCCGGGGGTGCTGCTGGCCACTCGGCGAGGACGTTGTGGTGAGTG
GGCAAATTGTTTCACCTTGTGCTGTGTTGCGCTTGGATTTGAGGCGCGAT
ATGTGATGGACTGGACGGACCATGTTTGGACCGAGGTATGGTCGCCCTTA
GAAGGGCGCTTTCTTCACTTAGACCCGTGTGAGAATGCAGCTGACACCCC
TTTGATGTATGAGGGTGGGTGGGGAAAGAAACTTTCTTATGTCGTGGCTT
TTGGTAAGGATCATTGCGTGGACGTGACTCGGCGCTACACCCGCACCTTC
GAGAGTCAGCTCTTGAGCCGTCGACAGAACGTTCCTGAGCTTGTACTGGC
GCAGCAAGTGGCAGCCTTGAACCAGCAGTTGCGCAATAACAACAGTAGCG
GGCGATCAGTTCAGGAACGGGCGCGCCGAGAACAATTTGAATTACATTCT
CACACCGTATTGGGCGAGGCCAGTGAATTAGTATACATCAAGCCTGGCGA
GCTGCGGGGGAGGATCTCGGGGAATGCAGCGTGGAAGCGCGCGCGAGGGG
AAGATGGCTTGGGTGAGCCTGGGAGGGAGCTGGAATGTGGGGGCGCAGAG
ACTCCATGCGCCTCGTCGCTCGCTGCGACGTGTGCAGTACCTCCGGCACA
AATCGAGAGAAAGGCCAGTGAGCCTATGATTCAGCGGGAGGAAATGGCAG
GGTTGCCCTTGTGGTCGTATGTAGCGGGTGGCGGGTCTTTGCTAGTATCG
GCCACTTCAGTCGGATCGCTAAAGGGAGAGTCTCTCACGCTGCTCGGCAG
TTACGGAGGTTTCGGTCCAGGGGCAGTCACCATTAACGGACTGCCCGTGG
CTGTGGGTCGACGAGGCCTGAATGTGGTGGTACTGGACTTAGTCCGGAGT
GTCATTGAGCAGAGCGTGGCTTTTGATGTGCCAGAAGACGGAGATGGCGA
CGCGGTTGATGATGACACTAGGGTTGTCGCCATTGCCTTCCTTCGCGAGA
AACTGGCACAGGGTATGGTGGTGGTGGCTGTCATATTGGGATCTGGTGCG
CACGCGCTGTGTCAGGCGGGGGCAGACCTCTGGAAGGATGCCTTCGGAAG
CCCACGCAAGATTCCTGGTCGGAGCGAGCCGTGGCTGGTCATAACAGGAG
GATCAACAGATGCTTGGGTGACGGCCGAGACGCGTGCCGCCGGTCAAGGA
CCGCTGAAGGTTATCGTGACAATGCCCTTGTCTCCTATTCACCCGTCAAT
TACATCTACACCTAGTCCCGATATGAAAGTGTGGCACGATGCCATTGCTG
CAGTGCCTCTTGTGCACTCGATGGGAGCCCAGGGCGACGGTGTTTTGAGC
GTACCGCCGCTGGAGGCTTATCAAGCAATGTGCACTGCTTTTTCTCAGGC
GCCTCTGGCAGGATTTTCTTACAAGGCTGAATGTGGCCTCATGGGGATGG
CGTGGACGAGCGGATTGCGGGGCGGAGCCGGTTGGAGGACGCACCAAGTG
TCTTCACCGATGTTGGCGCCTGATGGAGAGGGTTTAAAGGTGCGAATTCA
TAAGGCGTTCACTAAGCTTGTCGCGGATGGAATGACTCCGAATATGGCAG
CTCTACAGGCCCTGTCCCACATTAAGGAGACGATGCTGCAAGAGAAGCAG
CAAGCTTCGGCCAGTGTTACCAGATTCAAGGTTGTCTATGGCCCGTTGAT
CGGGACCTCCGTACACCCGCCGCTCAGTGAGACTCTGCACGTGTTTGATG
ATTCTGAGATAGCTACACCTGTCCAGGCCATGGCAGAATGGCAGGAAAGC
TTTCCACTTCTAATAATGCGGCGCGTGCGCATCTGGACTTCGCCGCGCGG
TATGTTAGGACTTCAGGCAGGCTATCAGCCTCAGGGTTCCGCTGATTCAC
CTATTTATTGGGCTCCCGTGCATCACCCTTCATCGAAATCGCCGTCGTCT
GCCTTCGTCAATGAGGAAGTCACTGGTACCCTAGTACTAGGTCGCGAGGA
AAATTTGGTAATGGTTGGTATACACACCAGCGATGCTTGCATTCTTGGCG
TGAATTTTACGACGACTGCACAGCGATCGATTTTCTTCGGCTTATCCGAT
CCCAGCGGCACTGCCACAACCAGCTTATCGGTGCCGCGCGGCATGGAAAT
TGTTGCATTTTATGGTATTATGGGCGGGGAGGGCATGCAACGTTTGGGCA
TTGTCTCAAGGAGGCAAGTTTCAAAATCCTGGGGAAACCTGTCTTTGCCT
GCGGACGCCTGGGGCATTTATACTGCCTGCCCAGTCGACCGTGCAAGTCG
ACAGCTTCTGTACTGGAGTGGAGGGGAGAAGATCAAGGTGGTGGCAGCAT
TGCGTGCAGCTCGTCGTTACCTGGAAAATTGCCTCAAGGACCCGAGCAAT
ACGACATTCCGGCTCATTCGCGTCCGAAGCAAATTCTTCCTGGACAATAT
TGGGAGCTTGCCGGGGTCGGGCAGCTTGATGCAAGCTTTGGGATTTGAGC
ACGTAGCGGCAATTGCCACTGTAGCGGCAAAGACGGAGGGACATGAGCCA
GAGGAAGAGGCGTGTTACATGCTTCCTTTGCCCAATGTGGCCCCCTCGAC
GCTCCTCTATTCTGTCAAGCGCCTTGACACAAACTTAACGAGGATAATGG
CGGAAATGAATTCTACGACAGCGGTATGAGAAGTGTAGAGCACTAGTACA
TCGAAGAAAAGTATGCCATATTGTTGGCACTACCATCATCGCTGTTGCGT
TGGGATTTCCTTTTTTATTGTGTGGGGTGACTGTCGGGCCAAGGTGGGGG
AGGTTGACTTTTGCAACGACACGCCAACCTCACTCTCGTCCAAAGCCGTG
CAGGTACTGCTATTATTTTTCGTATGAACAATGCGCCTCTTATACAAGCT
TATGAGATTGAAAGAGCCGTTCCTGAGACGTTGTTGTTTTCGTTGGCGAG
TCGGTAATGGAAATAATAATAATGAGAGTGAGAAGCACTGCGCTTGCCAC
TTCCACCACAGCCCGCGGTCATGCAAACTCGCCAAGCCCCTCCACTCACT
CTTATATTTGTTCCACGCTACCACCCGACACCGTGCCTTCAATTACAGGT
CGCTCCTCTCTGCCCTGTGTTTTTCCTTTTCTTGATTTCATGGCGACGGT
GGGTGCAGCAGCCACGGCGGCATCCCGGGCCGAGGTTTTGCATGAGAGCC
TAGACCTGCGCGTGGACTTGGAGAAGCGTGAAGTTAAGGGTCATGCCACC
GTCTGGGTGCTGTTGCCGCCCTTACCTGCGGGAGATTTGGGGACGGTTGA
CGAGGGCGTTATGGAATACCGGCTGCATGCCCGACAGATGGAAATCCACG
AGGTCAAAGTGAATGACATGCCGGCCTCCTACATGTACCCGCACCCCGTC
GACCTCCTTCGTGATTTTGTTCCACCCGGGAGCGAAGACATTGATGACAG
GGAGAAGAGTGGCTCGTCTGCGCGAATGGACGGGGAGGCCTTGGACCTTC
ACTACCGATGTCAACTCATTGCTTCGCAGGAGGGTGAGCTTAGCCTACAA
CTGCCCAAGCGACAATCATGGAGGCCACCGCCGTCCGACGTCCAAGAGGA
AGGCGACGAAACTGTCAAAAATATTCCACAAGTGGTCCTGAATGCCGGCA
TAGCTGCCCTCCGGATTTGCAAGATCGAGATTGATTACAGGTTGCAGAAT
CCTGTGGCTGGCCTGCGTTTTGATAGTCATCCTGCCCATGCCTATAGCAT
GCGTTGTCCCAGCGTCCTGCACGATTTTGATGGGCCCCGATGTTGGTTCC
CTTGCGCCGACCGCACTACGGACATTTTTACTCTGGACATGGTGGTAGCG
GTTGTTTCTCCAGCGTCGTCGAATAGAGGGGAGGTTGGGAATGGGGACAC
CGAGGCTAATGACCGAGAGGGCAATCATGTAGGAAAGGTTGACATTGTGA
ACGACAGTGGTACCAACAGTAGTAGTAGAGCAAGCACCACAATTAGCAAC
AGCAGCACAGCCATCAACAGAGATGAGGAGCATCCAGTAGTAGTGCTGGT
TGGAGGTGGGCAGCTTTTGGGGAAGGAGAGAAAGGTGGCGGACGGGACTG
TAGTGTGGCGTTATGCAATAGAAACACCCATTACGGCATCAGCTGTCTCG
CTGGTTGTGGGTCACTTTGGGAAGTATGTGGATCCGGGCGTGCCTCGATT
GACTCACCATTATCTGCTGCGGGAGGAGCGACGAGCAGCAACCTTCAAAG
CTTCCAATGGAAGAAATAGCCTTCCAACAATAGAGAAGCCATTGCCACCA
CCACCGCCACCACGATCGTGGGTAAGTCACAGCGTGGAGGGCATGGGTCC
GGCTATGAGCTTTCTGGCGGATTTCTTTCACCTCGCTCCAGGCGGCGGAG
AAGCAGCAACAGGCAGTGCCCCTACCCCTTCTGTCGTAGTTCCTTACCTC
GAGCACCGAATTGTGTTCGTCAAGGGCCTACCTGAGGCCAGTATGGCTTT
CCACGGCCTCTCCTTGCATAGGGTAGAGGACGTGCACCCTCCTCGTGTGT
TCGACCACTCCATGACCTTTCACCTCGCTCTCGCCGAGGGCCTCTTCGCG
TCTTGGCTTCTCCCTCGAGTTCGTCCCCGCTTCACCCGCGACCGTTGGAT
CTATCACGGCGTGTTAGGATATCTCGTCCTAATGTACGTACGGCGGCGAT
ACGGCGAGCATGAATACCGATATCGTCTGCTGAGATTGATGGATGCAGTC
ACAGCTTTGGAACGCTCGGGGCAAAGCACGCCATTACTGCCTCCAGACTC
AGTCCTTTTGGCGAGTGAGATATACAGTCCTGCTAGCTTGGAATTGGTGC
GAGTCAAGCCTCCAGTGATTATGCATATGATTGAACAGCGTGTCGGCCGC
AAATCTTTGCGAGATGTCCTGCGCTCCGTGGCGTGCCCCACGCCCGTCGT
GTCGGCAATACCAGCAGCAGCAAGTGGAGGAGG

Coding sequence (CDS) from alignment at scaffold_7:753241..759473-

>mRNA_3142 ID=mRNA_3142|Name=jgi.p|Nanoce1779_2|629396|organism=Nannochloropsis oceanica|type=CDS|length=3882bp|location=Sequence derived from alignment at scaffold_7:753241..759473- (Nannochloropsis oceanica)
ATGTGCCACGTCGTCCACATTACGCACTCACCCACGTACGGCTACCCATT
CCTTCTCTCTCTCTTCGAAGGGATGGCCCGTCTTCGCCTAAACGTCTACG
AGGCGGCAACGAGGACGCCAAGCAAAGACATTACCGTCGCCTGGCCCATC
GGTCAAGGAGCATCCACACCCACTCAAGCCCTCTTCTCCTCGCTCCAAGC
TCTGGTCCACTCCCACACAGGCCTTGAGCCCTGCAATCAGCTTATCTTGT
ACGGCGATGTCGCTTACCCTATCAGAGACGATGCGGACGTGGAAGCTCTT
ATGCTACCCGCGGGAGATCCAGAGGACGGTTCCTTTCCCGTAACCTCGGC
CACGCAGCAGGCTTTTATCAGTGTGCTGCCCGCAAGTCTCTTGCGGGCCA
GCATCCAGGACGGCTGTTCTCGCGTCTACTTCGGAGAGCGCGCCGTAGTC
CAGCCGTGCTACGTGATTCCGGGGAGCGATCAGAGCGTGTGTGAGACTTG
TCAAGCGCTCTGTTTTCCCGAAGGGTTGCTGCTGGCCAAAGTGGGTGCGC
CCATGGAACCCTTTGTGTGTGGTGCGCCAGCCCTGTGTTCCGAAGGCCTG
GGTGTATACCTTTTCAAAGAACGCTTGCATGAGGCCAACACCATTTGGGG
TGGAGAAGGAGAGAAGGAAGGTGAGGCGACCAGAACCATTCAAGCCGAGG
AATCACGAAATTCCTGCGCCACGACCCACAAAGCTTTCATGCTCTCACCA
CCAGCTTTGGCCTTGCTTGCGACCTTTCGTCAAGCCGCATATGTTCAGCA
AGCTTTGGGTTTTGACCAGTATAGTCGGGAAGCGGCGGAAATGATGGCTC
GATTGCAAAGCGGCAGGAGCACCATTTTGGCTTACGATGCTCCGGCGTTG
AAGAACAAGGCGTTGTCCACCATCCCCACGGCCGCGCTGCACGCGCGGGC
CATGATGGCAGGAGGTGATCCACAGCGGAATCCTCTCCACTTTCAGGATA
TCTTGCTGCGGGAGCTGCTGGCCTGGTTTAAGCACGATTTTTTTTCATGG
GTCAACAATCCCCCTTGCGAACGCTGTGGAGCGACCGATACAACCTTGTT
GGGTGGAGCAGCTCCGACACCTGCGGAATCCGCGGGCAAGGCCGGTCGCG
TGGAAGTATATACTTGTGAGTCGTGTCAAGCTCAGACCCGCTTTCCAAGG
TATAACGATCCGGGGGTGCTGCTGGCCACTCGGCGAGGACGTTGTGGTGA
GTGGGCAAATTGTTTCACCTTGTGCTGTGTTGCGCTTGGATTTGAGGCGC
GATATGTGATGGACTGGACGGACCATGTTTGGACCGAGGTATGGTCGCCC
TTAGAAGGGCGCTTTCTTCACTTAGACCCGTGTGAGAATGCAGCTGACAC
CCCTTTGATGTATGAGGGTGGGTGGGGAAAGAAACTTTCTTATGTCGTGG
CTTTTGGTAAGGATCATTGCGTGGACGTGACTCGGCGCTACACCCGCACC
TTCGAGAGTCAGCTCTTGAGCCGTCGACAGAACGTTCCTGAGCTTGTACT
GGCGCAGCAAGTGGCAGCCTTGAACCAGCAGTTGCGCAATAACAACAGTA
GCGGGCGATCAGTTCAGGAACGGGCGCGCCGAGAACAATTTGAATTACAT
TCTCACACCGTATTGGGCGAGGCCAGTGAATTAGTATACATCAAGCCTGG
CGAGCTGCGGGGGAGGATCTCGGGGAATGCAGCGTGGAAGCGCGCGCGAG
GGGAAGATGGCTTGGGTGAGCCTGGGAGGGAGCTGGAATGTGGGGGCGCA
GAGACTCCATGCGCCTCGTCGCTCGCTGCGACGTGTGCAGTACCTCCGGC
ACAAATCGAGAGAAAGGCCAGTGAGCCTATGATTCAGCGGGAGGAAATGG
CAGGGTTGCCCTTGTGGTCGTATGTAGCGGGTGGCGGGTCTTTGCTAGTA
TCGGCCACTTCAGTCGGATCGCTAAAGGGAGAGTCTCTCACGCTGCTCGG
CAGTTACGGAGGTTTCGGTCCAGGGGCAGTCACCATTAACGGACTGCCCG
TGGCTGTGGGTCGACGAGGCCTGAATGTGGTGGTACTGGACTTAGTCCGG
AGTGTCATTGAGCAGAGCGTGGCTTTTGATGTGCCAGAAGACGGAGATGG
CGACGCGGTTGATGATGACACTAGGGTTGTCGCCATTGCCTTCCTTCGCG
AGAAACTGGCACAGGGTATGGTGGTGGTGGCTGTCATATTGGGATCTGGT
GCGCACGCGCTGTGTCAGGCGGGGGCAGACCTCTGGAAGGATGCCTTCGG
AAGCCCACGCAAGATTCCTGGTCGGAGCGAGCCGTGGCTGGTCATAACAG
GAGGATCAACAGATGCTTGGGTGACGGCCGAGACGCGTGCCGCCGGTCAA
GGACCGCTGAAGGTTATCGTGACAATGCCCTTGTCTCCTATTCACCCGTC
AATTACATCTACACCTAGTCCCGATATGAAAGTGTGGCACGATGCCATTG
CTGCAGTGCCTCTTGTGCACTCGATGGGAGCCCAGGGCGACGGTGTTTTG
AGCGTACCGCCGCTGGAGGCTTATCAAGCAATGTGCACTGCTTTTTCTCA
GGCGCCTCTGGCAGGATTTTCTTACAAGGCTGAATGTGGCCTCATGGGGA
TGGCGTGGACGAGCGGATTGCGGGGCGGAGCCGGTTGGAGGACGCACCAA
GTGTCTTCACCGATGTTGGCGCCTGATGGAGAGGGTTTAAAGGTGCGAAT
TCATAAGGCGTTCACTAAGCTTGTCGCGGATGGAATGACTCCGAATATGG
CAGCTCTACAGGCCCTGTCCCACATTAAGGAGACGATGCTGCAAGAGAAG
CAGCAAGCTTCGGCCAGTGTTACCAGATTCAAGGTTGTCTATGGCCCGTT
GATCGGGACCTCCGTACACCCGCCGCTCAGTGAGACTCTGCACGTGTTTG
ATGATTCTGAGATAGCTACACCTGTCCAGGCCATGGCAGAATGGCAGGAA
AGCTTTCCACTTCTAATAATGCGGCGCGTGCGCATCTGGACTTCGCCGCG
CGGTATGTTAGGACTTCAGGCAGGCTATCAGCCTCAGGGTTCCGCTGATT
CACCTATTTATTGGGCTCCCGTGCATCACCCTTCATCGAAATCGCCGTCG
TCTGCCTTCGTCAATGAGGAAGTCACTGGTACCCTAGTACTAGGTCGCGA
GGAAAATTTGGTAATGGTTGGTATACACACCAGCGATGCTTGCATTCTTG
GCGTGAATTTTACGACGACTGCACAGCGATCGATTTTCTTCGGCTTATCC
GATCCCAGCGGCACTGCCACAACCAGCTTATCGGTGCCGCGCGGCATGGA
AATTGTTGCATTTTATGGTATTATGGGCGGGGAGGGCATGCAACGTTTGG
GCATTGTCTCAAGGAGGCAAGTTTCAAAATCCTGGGGAAACCTGTCTTTG
CCTGCGGACGCCTGGGGCATTTATACTGCCTGCCCAGTCGACCGTGCAAG
TCGACAGCTTCTGTACTGGAGTGGAGGGGAGAAGATCAAGGTGGTGGCAG
CATTGCGTGCAGCTCGTCGTTACCTGGAAAATTGCCTCAAGGACCCGAGC
AATACGACATTCCGGCTCATTCGCGTCCGAAGCAAATTCTTCCTGGACAA
TATTGGGAGCTTGCCGGGGTCGGGCAGCTTGATGCAAGCTTTGGGATTTG
AGCACGTAGCGGCAATTGCCACTGTAGCGGCAAAGACGGAGGGACATGAG
CCAGAGGAAGAGGCGTGTTACATGCTTCCTTTGCCCAATGTGGCCCCCTC
GACGCTCCTCTATTCTGTCAAGCGCCTTGACACAAACTTAACGAGGATAA
TGGCGGAAATGAATTCTACGACAGCGGTATGA

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