Properties
| Property Name | Value |
|---|
| TranscriptId | 584764 |
| Track | FilteredModels2 |
| ProteinId | 584678 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:730981..733435 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3132 ID=mRNA_3132|Name=jgi.p|Nanoce1779_2|584678|organism=Nannochloropsis oceanica|type=mRNA|length=1533bp
CAGGACACAGCGCAACAAGGATTAGACCACGCCCATACGTCAGGAGTAGG
TCGCTCAATAGGTTACTGCAGACACGGTAGGCGACCGCCTCTTTCTTGGT
GCGCCGCGGCTAGACAGCCTTACCACTGCCGTTGTCCCGGACGACGCCGG
CAGCATTTCCAACCCACACAACGACTCCCCGCACCACCATCATGGAGCTG
CCCGGTCAGATGGACGGTCACTCTAATGGGCACGCTAACGGAAATGGCTT
TCATGCCACGGAGAAGACGAGCTTAGTCCAGGCAGCTCAGCATGCCTACC
GACTAAATGATATCGAGGCTTCCCGACTAATCCACGAGCAGAAATTTGAG
GCGAAGAATCACGACGAGACGCATGATGCTGTGGGAGACTATGTCAAATC
CATGATTTTTGGGGGACTGGACGGCATCCTGACTTCCTTCGCCATTGTTG
CTGGCGCGGCTGGAGGTGGGCTGCCGGTTGAGGTGGTAATGGTGTTAGGG
TTCAGCAATATATTCGCGGATGCTTTCAGCATGGGTATGGGGGAGTATCT
GAGCAGCAAGGCGCACAATGAGTTTGTGTTGAAGGAGAAAGAGAGGGAGA
GTTGGGAGCTGCAAAATTTCCGGGAAGGAGAAATAAAAGAGATGATCGAT
ATTTATGTGGAGAGAGGGATGGAGGCAGATGATGCCGAGGACGTGGTGCG
GAAGATGAGCAAGTACGACAACTTTTTTGTCAACGTGATGATGGTGGAGG
AGCTGGGGCTGCAAGTGCCAGATCCAGACGACGATATCGTCAAGGAAGGG
GTTGTGATGTTTTTGGCCTTTGCGGGGTTTGGTGCGATGCCCCTGTTGGG
CTACGCGCTGATTCCTTTGTGTTTCCCGCATTTTGGACCGAAGGCCTTAT
TCAATGTTGCGTGCATTGTGACTGCGCTGACGTTATTTGTGATGGGCGCG
GTGAAGAGCAAGTTTTCTACGCGGGGATGGCTGCACTCGGGGATGGAGAT
GTTGGTGCTGGGAGGGGTGTGTGCGCTGATGGCGTATGAAATCGGGCACT
TGGTCAGCAGTCTGGTGGGAGTGGGGGAGGTATAGGGAGAGCGGATAAAG
GAAGACAAGAGGGCGAGAGTGACAGGAAATGTGAGTGGAGAAGAACTGTG
CCTGTCGGTGAATAGAAAGGGGAATATTTTTGGATGGAGGGATGCACGAA
GACCATGGCAGGCGAGGCAGAGGCTAATGAAACTGCGCATAAAGGAAGGA
AGGGAAACAGAAGCAGCAGCCGGACAGCGGCAGGATTAAGAATAATCGAG
GGTGAGATGGTAAATGGTGGTCGTCAGATTTCTATACATACAGCAATCCA
ACCATAGTGTCGAAATGTTTTGTGCAAGCAATAATCAACCTCATCCAAAA
AGATAAGCTACAAACGAAGAAAAAGGCGGTGATGGACCGAGAACGATACA
AGACAGAAGACGAAAGAGAAGACGAAAGAGAAGAAAAGGAGGTGAAGAGA
AAAAGAAGGAAAACAGCACGGAATATTTGTTCG back to topprotein sequence of jgi.p|Nanoce1779_2|584678 >mRNA_3132-protein ID=mRNA_3132-protein|Name=jgi.p|Nanoce1779_2|584678|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MELPGQMDGHSNGHANGNGFHATEKTSLVQAAQHAYRLNDIEASRLIHEQ
KFEAKNHDETHDAVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVM
VLGFSNIFADAFSMGMGEYLSSKAHNEFVLKEKERESWELQNFREGEIKE
MIDIYVERGMEADDAEDVVRKMSKYDNFFVNVMMVEELGLQVPDPDDDIV
KEGVVMFLAFAGFGAMPLLGYALIPLCFPHFGPKALFNVACIVTALTLFV
MGAVKSKFSTRGWLHSGMEMLVLGGVCALMAYEIGHLVSSLVGVGEV* back to topmRNA from alignment at scaffold_7:730981..733435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3132 ID=mRNA_3132|Name=jgi.p|Nanoce1779_2|584678|organism=Nannochloropsis oceanica|type=mRNA|length=2455bp|location=Sequence derived from alignment at scaffold_7:730981..733435+ (Nannochloropsis oceanica)
CAGGACACAGCGCAACAAGGATTAGACCACGCCCATACGTCAGGAGTAGG
TCGCTCAATAGGTTACTGCAGACACGGTAGGCGACCGCCTCTTTCTTGGT
GCGCCGCGGCTAGACAGCCTTACCACTGCCGTTGTCCCGGACGACGCCGG
CAGCATTTCCAACCCACACAACGACTCCCCGCACCACCATCATGGAGCTG
CCCGGTCAGATGGACGGTCACTCTAATGGGCACGCTAACGGAAATGGCTT
TCATGCCACGGAGAAGACGAGCTTAGTCCAGGCAGCTCAGCATGCCTACC
GACTAAATGATATCGAGGCTTCCCGGTACGTACAACCAAAGAAGAGAGCA
GGCGAATAGCAATGCACTTGTGAATGGGGCGGAGATGAAGGGTACATGCG
AGTGGATACGGATGTAGATAACTGCAGAGGTGATGTTATTAATCATTGGT
TTTCGGCCTCCCGTCTCGGGTGCTTTTGCTGAAAAGTCCCATGTAACACG
AACCATTCTGGACGTGCATCGACTTCCTGTCGGCATGATGTCCCTCATTG
CCCGCAATCCCTTCCCCTCCGGCTCCTTTGGATCTTGTCCATCCCTTCAT
ATATTTTTTTCGGAGTCGAGTCCCGGATGCTTTTTGTAAGCAACCCTTCT
GGTTTGTGCTCAACTCCCTCCCTCCCTCTGTTCCTCTTCACCTCACCTCT
GCAGACTAATCCACGAGCAGAAATTTGAGGCGAAGAATCACGACGAGACG
CATGATGCTGTGGGAGACTATGTCAAATCCATGATTTTTGGGGGACTGGA
CGGCATCCTGACTTCCTTCGCCATTGTTGCTGGCGCGGCTGGAGGTGGGC
TGCCGGTTGAGGTGGTAATGGTGTTAGGGTTCAGCAATATATTCGCGGAT
GCTTTCAGCATGGGTATGGGGGAGTATCTGAGCAGCAAGGCGCACAATGA
GTTTGTGTTGAAGGAGAAAGAGAGGGAGAGTTGGTGAGTGTCCTTATGAG
GGAGGAGGGAGGGAGGGAGGTGGTAGTGGATGCAAGTGGTGAATTTGCAA
TCGCAGCAACGGCACCTTTTTTAGTCCTGACATTGCTGACCGGAAGAGAT
TGATCGGCATCACATGTTATTATCTGATCTTGCAAGGTTAGATGCACACA
AACTCGCTGAAAGCCTCCTCTCTCTCCATCTTCTTACCTCTCTTACTTCA
GGGAGCTGCAAAATTTCCGGGAAGGAGAAATAAAAGAGATGATCGATATT
TATGTGGAGAGAGGGATGGAGGCAGATGATGCCGAGGTACGTGCATATAA
TATCTGAGGGTATACGTAGATGGAAGTGGAGGAGATTGTGCGTTATGTTT
TTCCTTTTATTGAGCGTTGTGCATTTGTTTTCTTCCCTTTTTTGTGCCTT
GGGAGGGAGTGCTTGAGAATTAGAGCGCGGGGTGGAGGAAGTGTGAGGGC
GGGTGGCACAGACGTGCGTTTTCATGCTCGAAAGATAAGAAGAAAGAGGA
TAGGGATGTGGACGACGAAGTACGGGAGTGGCGACTGTTTTGTTGTCTCC
AAGCCGCTTGATGTGATTCCTTCGTTCACCCTCTCTCGCTCTCTCACTCT
TCTTCTCACAGGACGTGGTGCGGAAGATGAGCAAGTACGACAACTTTTTT
GTCAACGTGATGATGGTGGAGGAGCTGGGGCTGCAAGTGCCAGATCCAGA
CGACGATATCGTCAAGGAAGGGGTTGTGATGTTTTTGGCCTTTGCGGGGT
TTGGTGCGATGCCCCTGTTGGGCTACGCGCTGATTCCTTTGTGTTTCCCG
CATTTTGGACCGAAGGCCTTATTCAATGTTGCGTGCATTGTGACTGCGCT
GACGTTATTTGTGATGGGCGCGGTGAAGAGCAAGTTTTCTACGCGGGGAT
GGCTGCACTCGGGGATGGAGATGTTGGTGCTGGGAGGGGTGTGTGCGCTG
ATGGCGTATGAAATCGGGCACTTGGTCAGCAGTCTGGTGGGAGTGGGGGA
GGTATAGGGAGAGCGGATAAAGGAAGACAAGAGGGCGAGAGTGACAGGAA
ATGTGAGTGGAGAAGAACTGTGCCTGTCGGTGAATAGAAAGGGGAATATT
TTTGGATGGAGGGATGCACGAAGACCATGGCAGGCGAGGCAGAGGCTAAT
GAAACTGCGCATAAAGGAAGGAAGGGAAACAGAAGCAGCAGCCGGACAGC
GGCAGGATTAAGAATAATCGAGGGTGAGATGGTAAATGGTGGTCGTCAGA
TTTCTATACATACAGCAATCCAACCATAGTGTCGAAATGTTTTGTGCAAG
CAATAATCAACCTCATCCAAAAAGATAAGCTACAAACGAAGAAAAAGGCG
GTGATGGACCGAGAACGATACAAGACAGAAGACGAAAGAGAAGACGAAAG
AGAAGAAAAGGAGGTGAAGAGAAAAAGAAGGAAAACAGCACGGAATATTT
GTTCG back to topCoding sequence (CDS) from alignment at scaffold_7:730981..733435+ >mRNA_3132 ID=mRNA_3132|Name=jgi.p|Nanoce1779_2|584678|organism=Nannochloropsis oceanica|type=CDS|length=3576bp|location=Sequence derived from alignment at scaffold_7:730981..733435+ (Nannochloropsis oceanica)
ATGGAGCTGCCCGGTCAGATGGACGGTCACTCTAATGGGCACGCTAACGG
AAATGGCTTTCATGCCACGGAGAAGACGAGCTTAGTCCAGGCAGCTCAGC
ATGCCTACCGACTAAATGATATCGAGGCTTCCCGACTAATCCACGAGCAG
AAATTTGAGGCGAAGAATCACGACGAGACGCATGATGCTGTGGGAGACTA
TGTCAAATCCATGATTTTTGGGGGACTGGACGGCATCCTGACTTCCTTCG
CCATTGTTGCTGGCGCGGCTGGAGGTGGGCTGCCGGTTGAGGTGGTAATG
GTGTTAGGGTTCAGCAATATATTCGCGGATGCTTTCAGCATGGGTATGGG
GGAGTATCTGAGCAGCAAGGCGCACAATGAGTTTGTGTTGAAGGAGAAAG
AGAGGGAGAGTTGGGAGCTGCAAAATTTCCGGGAAGGAGAAATAAAAGAG
ATGATCGATATTTATGTGGAGAGAGGGATGGAGGCAGATGATGCCGAGGA
CGTGGTGCGGAAGATGAGCAAGTACGACAACTTTTTTGTCAACGTGATGA
TGGTGGAGGAGCTGGGGCTGCAAGTGCCAGATCCAGACGACGATATCGTC
AAGGAAGGGGTTGTGATGTTTTTGGCCTTTGCGGGGTTTGGTGCGATGCC
CCTGTTGGGCTACGCGCTGATTCCTTTGTGTTTCCCGCATTTTGGACCGA
AGGCCTTATTCAATGTTGCGTGCATTGTGACTGCGCTGACGTTATTTGTG
ATGGGCGCGGTGAAGAGCAAGTTTTCTACGCGGGGATGGCTGCACTCGGG
GATGGAGATGTTGGTGCTGGGAGGGGTGTGTGCGCTGATGGCGTATGAAA
TCGGGCACTTGGTCAGCAGTCTGGTGGGAGTGGGGGAGGTATAGATGGAG
CTGCCCGGTCAGATGGACGGTCACTCTAATGGGCACGCTAACGGAAATGG
CTTTCATGCCACGGAGAAGACGAGCTTAGTCCAGGCAGCTCAGCATGCCT
ACCGACTAAATGATATCGAGGCTTCCCGACTAATCCACGAGCAGAAATTT
GAGGCGAAGAATCACGACGAGACGCATGATGCTGTGGGAGACTATGTCAA
ATCCATGATTTTTGGGGGACTGGACGGCATCCTGACTTCCTTCGCCATTG
TTGCTGGCGCGGCTGGAGGTGGGCTGCCGGTTGAGGTGGTAATGGTGTTA
GGGTTCAGCAATATATTCGCGGATGCTTTCAGCATGGGTATGGGGGAGTA
TCTGAGCAGCAAGGCGCACAATGAGTTTGTGTTGAAGGAGAAAGAGAGGG
AGAGTTGGGAGCTGCAAAATTTCCGGGAAGGAGAAATAAAAGAGATGATC
GATATTTATGTGGAGAGAGGGATGGAGGCAGATGATGCCGAGGACGTGGT
GCGGAAGATGAGCAAGTACGACAACTTTTTTGTCAACGTGATGATGGTGG
AGGAGCTGGGGCTGCAAGTGCCAGATCCAGACGACGATATCGTCAAGGAA
GGGGTTGTGATGTTTTTGGCCTTTGCGGGGTTTGGTGCGATGCCCCTGTT
GGGCTACGCGCTGATTCCTTTGTGTTTCCCGCATTTTGGACCGAAGGCCT
TATTCAATGTTGCGTGCATTGTGACTGCGCTGACGTTATTTGTGATGGGC
GCGGTGAAGAGCAAGTTTTCTACGCGGGGATGGCTGCACTCGGGGATGGA
GATGTTGGTGCTGGGAGGGGTGTGTGCGCTGATGGCGTATGAAATCGGGC
ACTTGGTCAGCAGTCTGGTGGGAGTGGGGGAGGTATAGATGGAGCTGCCC
GGTCAGATGGACGGTCACTCTAATGGGCACGCTAACGGAAATGGCTTTCA
TGCCACGGAGAAGACGAGCTTAGTCCAGGCAGCTCAGCATGCCTACCGAC
TAAATGATATCGAGGCTTCCCGACTAATCCACGAGCAGAAATTTGAGGCG
AAGAATCACGACGAGACGCATGATGCTGTGGGAGACTATGTCAAATCCAT
GATTTTTGGGGGACTGGACGGCATCCTGACTTCCTTCGCCATTGTTGCTG
GCGCGGCTGGAGGTGGGCTGCCGGTTGAGGTGGTAATGGTGTTAGGGTTC
AGCAATATATTCGCGGATGCTTTCAGCATGGGTATGGGGGAGTATCTGAG
CAGCAAGGCGCACAATGAGTTTGTGTTGAAGGAGAAAGAGAGGGAGAGTT
GGGAGCTGCAAAATTTCCGGGAAGGAGAAATAAAAGAGATGATCGATATT
TATGTGGAGAGAGGGATGGAGGCAGATGATGCCGAGGACGTGGTGCGGAA
GATGAGCAAGTACGACAACTTTTTTGTCAACGTGATGATGGTGGAGGAGC
TGGGGCTGCAAGTGCCAGATCCAGACGACGATATCGTCAAGGAAGGGGTT
GTGATGTTTTTGGCCTTTGCGGGGTTTGGTGCGATGCCCCTGTTGGGCTA
CGCGCTGATTCCTTTGTGTTTCCCGCATTTTGGACCGAAGGCCTTATTCA
ATGTTGCGTGCATTGTGACTGCGCTGACGTTATTTGTGATGGGCGCGGTG
AAGAGCAAGTTTTCTACGCGGGGATGGCTGCACTCGGGGATGGAGATGTT
GGTGCTGGGAGGGGTGTGTGCGCTGATGGCGTATGAAATCGGGCACTTGG
TCAGCAGTCTGGTGGGAGTGGGGGAGGTATAGATGGAGCTGCCCGGTCAG
ATGGACGGTCACTCTAATGGGCACGCTAACGGAAATGGCTTTCATGCCAC
GGAGAAGACGAGCTTAGTCCAGGCAGCTCAGCATGCCTACCGACTAAATG
ATATCGAGGCTTCCCGACTAATCCACGAGCAGAAATTTGAGGCGAAGAAT
CACGACGAGACGCATGATGCTGTGGGAGACTATGTCAAATCCATGATTTT
TGGGGGACTGGACGGCATCCTGACTTCCTTCGCCATTGTTGCTGGCGCGG
CTGGAGGTGGGCTGCCGGTTGAGGTGGTAATGGTGTTAGGGTTCAGCAAT
ATATTCGCGGATGCTTTCAGCATGGGTATGGGGGAGTATCTGAGCAGCAA
GGCGCACAATGAGTTTGTGTTGAAGGAGAAAGAGAGGGAGAGTTGGGAGC
TGCAAAATTTCCGGGAAGGAGAAATAAAAGAGATGATCGATATTTATGTG
GAGAGAGGGATGGAGGCAGATGATGCCGAGGACGTGGTGCGGAAGATGAG
CAAGTACGACAACTTTTTTGTCAACGTGATGATGGTGGAGGAGCTGGGGC
TGCAAGTGCCAGATCCAGACGACGATATCGTCAAGGAAGGGGTTGTGATG
TTTTTGGCCTTTGCGGGGTTTGGTGCGATGCCCCTGTTGGGCTACGCGCT
GATTCCTTTGTGTTTCCCGCATTTTGGACCGAAGGCCTTATTCAATGTTG
CGTGCATTGTGACTGCGCTGACGTTATTTGTGATGGGCGCGGTGAAGAGC
AAGTTTTCTACGCGGGGATGGCTGCACTCGGGGATGGAGATGTTGGTGCT
GGGAGGGGTGTGTGCGCTGATGGCGTATGAAATCGGGCACTTGGTCAGCA
GTCTGGTGGGAGTGGGGGAGGTATAG back to top
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