Properties
| Property Name | Value |
|---|
| TranscriptId | 670003 |
| Track | FilteredModels2 |
| ProteinId | 669917 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:720962..722982 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3127 ID=mRNA_3127|Name=jgi.p|Nanoce1779_2|669917|organism=Nannochloropsis oceanica|type=mRNA|length=1679bp
ACAGGAGACCGTAACGCCCCCTTTTGGTCACGCGGGGACGCGAACACCAT
CACGCTTCTGGTAGCCTTGCTTATGGAGCACGGCACCAGCAACGACGCTG
CATCCAGCACTCCTGCTGCCTCAGTGACTCAAGCCATCCCCGCCCAAGCT
GTAGCTGTATCCGCAGCCCAGGTTGACCCTCCCCCACCCTCGGCCTCCCT
CAAAGCCGTCGCCGGAAGCTCCGGTGTCATTGAAAGCGACGACGAGGACG
ACATGCCTCTCACTTCGTTGGCTAAGAACGGAAAAGCCGTCACCGGTGAC
GATTCAAGCGGGACTACGGCTGTCTCCTCTTCTTCAGGCGGTGCGGCCTC
TAATCCTGCTGTCGCTGTTGCTCCTGCTCCCAAGGCGGCGGCGGCGCCTG
CATCAGCAGCACCCGCACCAGTACCCGCAGCATCGACAGCAGCAGCACCG
AAGTATTTGAATGACGACGACATGCCTATTTCCAAGCTTTTTCATTATCC
ACCTGTTGCTGCCTCTGCTAATGGCGGCGGCAGCAGCACAGCGAAGAAGA
GAAAAGAATCGGAGGGTGGCGGCGGAGGAGGAGGGGAGGAGAGAAAGAAA
AAGTCTAAGTCTGACAAGGAAAAGGAGGAAGAAGAAGAGGCGGCAAGGCA
AAAAGAAAAGAAAAAAAATAAAAAAGAGCTGGAGCGGGAGACGGAGAGCA
GTACGGAGGCGGCGAATAGCAGCAAGGCCAAGTCATTGTCGAGGAGCAGC
GGCAGCAGCAAGTCAGCAGCGCACGGGGCGCGAACACAAGATTTCTACCA
GTTGGACAAGGGTGAATTGGTGCAAAAATTGTTACGGCGATGGTGGTATG
CGATTGAGTGGCCCGATGCAGCCTGTGCCACGCTGACGCTGGAGGGGTAC
CCCGGCGTGTTTGTCTGCGTCCGTGGCCCTCGCATTGGTCACGTGCTCGA
CAAGCGGGACCACGCCACCTGCCCGAACTTCAATAATTTTTCAAGGAAAC
CGTCGGCAGAGCTCAAGGAGTTGTTGTTCAAGGCTTTGGATGAACAAAAG
CGGCAACTTATGGAGCACGAAGGGGGAAACTATAAGCTTGAGAAACGGAT
TGACAAGGAGAGGAGATGGGCGGAGAAACTGGATGCGGGGAGGGCGGATA
AGGAAGCGAGGAGGAGAGGGTGGGAAGTGGTGGAGGAAAGGGGGGGGGGC
GACGTGGAGGGGGGAGGAGAAAAAAAGGAATTTTGAGGGGGGAAAGAGAA
TGTGGGAGCGAGAGAGGGATGAATGGGGTAGAGGAATTAGGTACTGAGAA
TGAAAAGTCGACAGGAATCAAATAGATGTGTGTAATGAAACATTAGATAG
AAGCAGACTGTTGCGAATTCACAGGGGGGGAGTGGCTGTCGTGTACGGGC
GGTAGGAAGGCCGTGAGCCATGCCTTCCCTTAAGTGATTGAAAGAGAGCC
CTTCTGCAGCAGGAGTCTTTACGAGACGGCGATGGTCATGCCGAGGGTTA
CAAAGGATTCTAAGGCCTGCCGCACGTGGTACCCACCTCAAAAAAGAGCT
CGGGAGCGAAAGGGGAGGGGGAGGGGAGACAATAACCCGAAGGCAAGACG
AGGACAATCAAAATGGAAGACATCACACGCTGTCCACACACCATGAGTAA
ACAAAAGAACGGAAAAGAAAGGATAGTTG back to topprotein sequence of jgi.p|Nanoce1779_2|669917 >mRNA_3127-protein ID=mRNA_3127-protein|Name=jgi.p|Nanoce1779_2|669917|organism=Nannochloropsis oceanica|type=polypeptide|length=388bp
MEHGTSNDAASSTPAASVTQAIPAQAVAVSAAQVDPPPPSASLKAVAGSS
GVIESDDEDDMPLTSLAKNGKAVTGDDSSGTTAVSSSSGGAASNPAVAVA
PAPKAAAAPASAAPAPVPAASTAAAPKYLNDDDMPISKLFHYPPVAASAN
GGGSSTAKKRKESEGGGGGGGEERKKKSKSDKEKEEEEEAARQKEKKKNK
KELERETESSTEAANSSKAKSLSRSSGSSKSAAHGARTQDFYQLDKGELV
QKLLRRWWYAIEWPDAACATLTLEGYPGVFVCVRGPRIGHVLDKRDHATC
PNFNNFSRKPSAELKELLFKALDEQKRQLMEHEGGNYKLEKRIDKERRWA
EKLDAGRADKEARRRGWEVVEERGGGDVEGGGEKKEF* back to topmRNA from alignment at scaffold_7:720962..722982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3127 ID=mRNA_3127|Name=jgi.p|Nanoce1779_2|669917|organism=Nannochloropsis oceanica|type=mRNA|length=2021bp|location=Sequence derived from alignment at scaffold_7:720962..722982- (Nannochloropsis oceanica)
ACAGGAGACCGTAACGCCCCCTTTTGGTCACGCGGGGACGCGAACACCAT
CACGCTTCTGGTAGCCTTGCTTATGGAGCACGGCACCAGGTAGGTGGTCA
ATTGACTGTAGAAGAGGGAACGAGGATCAGCCAAATGTGCTTCCATCCAC
CACCCGTCTCCCAAAGGCACAAGGCCCACTTACACCCTCCATCTAACTCC
ACGACAGCAACGACGCTGCATCCAGCACTCCTGCTGCCTCAGTGACTCAA
GCCATCCCCGCCCAAGCTGTAGCTGTATCCGCAGCCCAGGTTGACCCTCC
CCCACCCTCGGCCTCCCTCAAAGCCGTCGCCGGAAGCTCCGGTGTCATTG
AAAGCGACGACGAGGACGACATGCCTCTCACTTCGTTGGCTAAGAACGGA
AAAGCCGTCACCGGTGACGATTCAAGCGGGACTACGGCTGTCTCCTCTTC
TTCAGGCGGTGCGGCCTCTAATCCTGCTGTCGCTGTTGCTCCTGCTCCCA
AGGCGGCGGCGGCGCCTGCATCAGCAGCACCCGCACCAGTACCCGCAGCA
TCGACAGCAGCAGCACCGAAGTATTTGAATGACGACGACATGCCTATTTC
CAAGCTTTTTCATTATCCACCTGTTGCTGCCTCTGCTAATGGCGGCGGCA
GCAGCACAGCGAAGAAGAGAAAAGAATCGGAGGGTGGCGGCGGAGGAGGA
GGGGAGGAGAGAAAGAAAAAGTCTAAGTCTGACAAGGAAAAGGAGGAAGA
AGAAGAGGCGGCAAGGCAAAAAGAAAAGAAAAAAAATAAAAAAGAGCTGG
AGCGGGAGACGGAGAGCAGTACGGAGGCGGCGAATAGCAGCAAGGCCAAG
TCATTGTCGAGGAGCAGCGGCAGCAGCAAGTCAGCAGCGCACGGGGCGCG
AACACAAGATTTCTACCAGTTGGACAAGGGTGAATTGGTGCAAAAATTGT
TACGGCGATGGTGGTATGCGATTGAGTGGCCCGATGCAGCCTGTGCCACG
CTGGTAAGTAGGAAGGGAGAGAGGGAGGGAGGGAGGAAAGGGTGGACGTG
TTGAAGATAGGGTTGTGGGGTTTCGTGACACTAATTCTCTGCGTGTCGCC
TCTTCATGCCAGTCATACTTCTATGGGTCATGAATGAAAGGACGCTTCCG
ACGACACCAGGTCCACGCACTCACTCCCCTTTCTTCCTCCCTTTCTCCCT
CTTCAGCCCCCCCCCCCTAACTACGAGACGCTGGAGGGGTACCCCGGCGT
GTTTGTCTGCGTCCGTGGCCCTCGCATTGGTCACGTGCTCGACAAGCGGG
ACCACGCCACCTGCCCGAACTTCAATAATTTTTCAAGGAAACCGTCGGCA
GAGCTCAAGGAGTTGTTGTTCAAGGCTTTGGATGAACAAAAGCGGCAACT
TATGGAGCACGAAGGGGGAAACTATAAGCTTGAGAAACGGATTGACAAGG
AGAGGAGATGGGCGGAGAAACTGGATGCGGGGAGGGCGGATAAGGAAGCG
AGGAGGAGAGGGTGGGAAGTGGTGGAGGAAAGGGGGGGGGGCGACGTGGA
GGGGGGAGGAGAAAAAAAGGAATTTTGAGGGGGGAAAGAGAATGTGGGAG
CGAGAGAGGGATGAATGGGGTAGAGGAATTAGGTACTGAGAATGAAAAGT
CGACAGGAATCAAATAGATGTGTGTAATGAAACATTAGATAGAAGCAGAC
TGTTGCGAATTCACAGGGGGGGAGTGGCTGTCGTGTACGGGCGGTAGGAA
GGCCGTGAGCCATGCCTTCCCTTAAGTGATTGAAAGAGAGCCCTTCTGCA
GCAGGAGTCTTTACGAGACGGCGATGGTCATGCCGAGGGTTACAAAGGAT
TCTAAGGCCTGCCGCACGTGGTACCCACCTCAAAAAAGAGCTCGGGAGCG
AAAGGGGAGGGGGAGGGGAGACAATAACCCGAAGGCAAGACGAGGACAAT
CAAAATGGAAGACATCACACGCTGTCCACACACCATGAGTAAACAAAAGA
ACGGAAAAGAAAGGATAGTTG back to topCoding sequence (CDS) from alignment at scaffold_7:720962..722982- >mRNA_3127 ID=mRNA_3127|Name=jgi.p|Nanoce1779_2|669917|organism=Nannochloropsis oceanica|type=CDS|length=3492bp|location=Sequence derived from alignment at scaffold_7:720962..722982- (Nannochloropsis oceanica)
ACGCTGGAGGGGTACCCCGGCGTGTTTGTCTGCGTCCGTGGCCCTCGCAT
TGGTCACGTGCTCGACAAGCGGGACCACGCCACCTGCCCGAACTTCAATA
ATTTTTCAAGGAAACCGTCGGCAGAGCTCAAGGAGTTGTTGTTCAAGGCT
TTGGATGAACAAAAGCGGCAACTTATGGAGCACGAAGGGGGAAACTATAA
GCTTGAGAAACGGATTGACAAGGAGAGGAGATGGGCGGAGAAACTGGATG
CGGGGAGGGCGGATAAGGAAGCGAGGAGGAGAGGGTGGGAAGTGGTGGAG
GAAAGGGGGGGGGGCGACGTGGAGGGGGGAGGAGAAAAAAAGGAATTTTG
ACAACGACGCTGCATCCAGCACTCCTGCTGCCTCAGTGACTCAAGCCATC
CCCGCCCAAGCTGTAGCTGTATCCGCAGCCCAGGTTGACCCTCCCCCACC
CTCGGCCTCCCTCAAAGCCGTCGCCGGAAGCTCCGGTGTCATTGAAAGCG
ACGACGAGGACGACATGCCTCTCACTTCGTTGGCTAAGAACGGAAAAGCC
GTCACCGGTGACGATTCAAGCGGGACTACGGCTGTCTCCTCTTCTTCAGG
CGGTGCGGCCTCTAATCCTGCTGTCGCTGTTGCTCCTGCTCCCAAGGCGG
CGGCGGCGCCTGCATCAGCAGCACCCGCACCAGTACCCGCAGCATCGACA
GCAGCAGCACCGAAGTATTTGAATGACGACGACATGCCTATTTCCAAGCT
TTTTCATTATCCACCTGTTGCTGCCTCTGCTAATGGCGGCGGCAGCAGCA
CAGCGAAGAAGAGAAAAGAATCGGAGGGTGGCGGCGGAGGAGGAGGGGAG
GAGAGAAAGAAAAAGTCTAAGTCTGACAAGGAAAAGGAGGAAGAAGAAGA
GGCGGCAAGGCAAAAAGAAAAGAAAAAAAATAAAAAAGAGCTGGAGCGGG
AGACGGAGAGCAGTACGGAGGCGGCGAATAGCAGCAAGGCCAAGTCATTG
TCGAGGAGCAGCGGCAGCAGCAAGTCAGCAGCGCACGGGGCGCGAACACA
AGATTTCTACCAGTTGGACAAGGGTGAATTGGTGCAAAAATTGTTACGGC
GATGGTGGTATGCGATTGAGTGGCCCGATGCAGCCTGTGCCACGCTGATG
GAGCACGGCACCAGACGCTGGAGGGGTACCCCGGCGTGTTTGTCTGCGTC
CGTGGCCCTCGCATTGGTCACGTGCTCGACAAGCGGGACCACGCCACCTG
CCCGAACTTCAATAATTTTTCAAGGAAACCGTCGGCAGAGCTCAAGGAGT
TGTTGTTCAAGGCTTTGGATGAACAAAAGCGGCAACTTATGGAGCACGAA
GGGGGAAACTATAAGCTTGAGAAACGGATTGACAAGGAGAGGAGATGGGC
GGAGAAACTGGATGCGGGGAGGGCGGATAAGGAAGCGAGGAGGAGAGGGT
GGGAAGTGGTGGAGGAAAGGGGGGGGGGCGACGTGGAGGGGGGAGGAGAA
AAAAAGGAATTTTGACAACGACGCTGCATCCAGCACTCCTGCTGCCTCAG
TGACTCAAGCCATCCCCGCCCAAGCTGTAGCTGTATCCGCAGCCCAGGTT
GACCCTCCCCCACCCTCGGCCTCCCTCAAAGCCGTCGCCGGAAGCTCCGG
TGTCATTGAAAGCGACGACGAGGACGACATGCCTCTCACTTCGTTGGCTA
AGAACGGAAAAGCCGTCACCGGTGACGATTCAAGCGGGACTACGGCTGTC
TCCTCTTCTTCAGGCGGTGCGGCCTCTAATCCTGCTGTCGCTGTTGCTCC
TGCTCCCAAGGCGGCGGCGGCGCCTGCATCAGCAGCACCCGCACCAGTAC
CCGCAGCATCGACAGCAGCAGCACCGAAGTATTTGAATGACGACGACATG
CCTATTTCCAAGCTTTTTCATTATCCACCTGTTGCTGCCTCTGCTAATGG
CGGCGGCAGCAGCACAGCGAAGAAGAGAAAAGAATCGGAGGGTGGCGGCG
GAGGAGGAGGGGAGGAGAGAAAGAAAAAGTCTAAGTCTGACAAGGAAAAG
GAGGAAGAAGAAGAGGCGGCAAGGCAAAAAGAAAAGAAAAAAAATAAAAA
AGAGCTGGAGCGGGAGACGGAGAGCAGTACGGAGGCGGCGAATAGCAGCA
AGGCCAAGTCATTGTCGAGGAGCAGCGGCAGCAGCAAGTCAGCAGCGCAC
GGGGCGCGAACACAAGATTTCTACCAGTTGGACAAGGGTGAATTGGTGCA
AAAATTGTTACGGCGATGGTGGTATGCGATTGAGTGGCCCGATGCAGCCT
GTGCCACGCTGATGGAGCACGGCACCAGACGCTGGAGGGGTACCCCGGCG
TGTTTGTCTGCGTCCGTGGCCCTCGCATTGGTCACGTGCTCGACAAGCGG
GACCACGCCACCTGCCCGAACTTCAATAATTTTTCAAGGAAACCGTCGGC
AGAGCTCAAGGAGTTGTTGTTCAAGGCTTTGGATGAACAAAAGCGGCAAC
TTATGGAGCACGAAGGGGGAAACTATAAGCTTGAGAAACGGATTGACAAG
GAGAGGAGATGGGCGGAGAAACTGGATGCGGGGAGGGCGGATAAGGAAGC
GAGGAGGAGAGGGTGGGAAGTGGTGGAGGAAAGGGGGGGGGGCGACGTGG
AGGGGGGAGGAGAAAAAAAGGAATTTTGACAACGACGCTGCATCCAGCAC
TCCTGCTGCCTCAGTGACTCAAGCCATCCCCGCCCAAGCTGTAGCTGTAT
CCGCAGCCCAGGTTGACCCTCCCCCACCCTCGGCCTCCCTCAAAGCCGTC
GCCGGAAGCTCCGGTGTCATTGAAAGCGACGACGAGGACGACATGCCTCT
CACTTCGTTGGCTAAGAACGGAAAAGCCGTCACCGGTGACGATTCAAGCG
GGACTACGGCTGTCTCCTCTTCTTCAGGCGGTGCGGCCTCTAATCCTGCT
GTCGCTGTTGCTCCTGCTCCCAAGGCGGCGGCGGCGCCTGCATCAGCAGC
ACCCGCACCAGTACCCGCAGCATCGACAGCAGCAGCACCGAAGTATTTGA
ATGACGACGACATGCCTATTTCCAAGCTTTTTCATTATCCACCTGTTGCT
GCCTCTGCTAATGGCGGCGGCAGCAGCACAGCGAAGAAGAGAAAAGAATC
GGAGGGTGGCGGCGGAGGAGGAGGGGAGGAGAGAAAGAAAAAGTCTAAGT
CTGACAAGGAAAAGGAGGAAGAAGAAGAGGCGGCAAGGCAAAAAGAAAAG
AAAAAAAATAAAAAAGAGCTGGAGCGGGAGACGGAGAGCAGTACGGAGGC
GGCGAATAGCAGCAAGGCCAAGTCATTGTCGAGGAGCAGCGGCAGCAGCA
AGTCAGCAGCGCACGGGGCGCGAACACAAGATTTCTACCAGTTGGACAAG
GGTGAATTGGTGCAAAAATTGTTACGGCGATGGTGGTATGCGATTGAGTG
GCCCGATGCAGCCTGTGCCACGCTGATGGAGCACGGCACCAG back to top
|