Properties
| Property Name | Value |
|---|
| TranscriptId | 584677 |
| Track | FilteredModels2 |
| ProteinId | 584591 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:677110..678472 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3110 ID=mRNA_3110|Name=jgi.p|Nanoce1779_2|584591|organism=Nannochloropsis oceanica|type=mRNA|length=1363bp
ATATAGGAGGTCCTCGTTTCGATTGCGTTGCCTGCACGTTGGTCATGTTT
TCAATTAAACCCTTCTCATATACACGCAACTCAGGCAATACCTTGGTCTC
AATGCCCTGCAGCCACGCGGTGACGAGGCCGTGAGGCTGGCAAGCCAACT
AATAGAGCAAAGCCAAGGAATGGTATACGAAGAAGAAAGTGACGACGGGA
AGGGACTCGGTAGGATGGGCGACATGGCCACTATGACGACGACGACGCAG
CCCCGGTCGCACGACAGCATGCGAATGCGCCGACCCCCGACAACTGGGGA
GACGCTTGTGCCTCGTGGTTTTGAAAAGGTAGGTGGTGGAGCGTGTATCT
CTTTCACTGTTCTTGTGCCTCCATCCCTCACGACCTCCTCACCCTTCCAA
CACCCTCGATCCGAGATGGGTTCCCTTCTTAGATTTACCGATTTTAAACC
CTCTTCTTCCTCTTCCAGGTGGCCCATCCCCTCTTTCTCCTCCTGCGTGG
CCCTCCCCCACCAGACAAGCGCCCTCTCAAGATGAATTTTGCTCCTTTTG
AAGCAGGAGATGGAGCATTGCTTTCCGCAGTAACTCTGGGAGCATCGCCA
CCACAGGAAGTCGCCCAGCAGAACCAACCTCAAACTCCACAACTCCACAC
AGCATATCTTAAGACCAAACTCTTAACCCACAAGACTATTAGTTCGAATA
TAACTGCCGGGGAGAATGAGGATATCGACCTCTCATGCGCTGTGTGCCTG
GAAGAACACACCGTGCCCGTTGTCGTTGTCACCTCCGATTGCACCCACAT
ATTCTGCAAGAAGTGCATCACCTGCTGGTTGTCCATTAACCATTCATCCT
CGCATGACCAAGGACCGTCCTGCCCGCTCTGCAAACGCCCGGTCACCTGG
CTTCTCAGCCTCTCTTCCTCCTCCCCTCCAACTCCTCCGTTTCGATTCGT
TCTCCTAGCGGTAGGTCCCGATGCCGAGCTCCTAGAGCGACAGCCCTGGC
CGTCACCGGCGCTGCTACAGGTTTCTCGACAAAAGCTATTGGATTTGTTT
GAGGCACGGGAGCGACGGCACCAGCAGCGGTGCCAGCAGCAGCAGCAACA
GCAGCAGCAAGTAAAGGAGTCAAAAGGCGAAGACGCAAGCAAGAAAAGTG
GAAAGAGGAGAGGTTACGAGCCAGGGGCGGGCGTCCAGCAAGGTAGGCCC
TTGACTGAATCGCTCCAAGATGAATTGCGGCGTGTGAACGCAGAAATTAC
GCTCCTCAAAACCAAAAAGAAGAGATAATGAAGCTCAGGTAAATGCAGGG
TGTACCAGTTGTAAGACACGAAGCAATGTAGTCTATAATAGGAAAAAAGC
TATGCTGGCGCTC back to topprotein sequence of jgi.p|Nanoce1779_2|584591 >mRNA_3110-protein ID=mRNA_3110-protein|Name=jgi.p|Nanoce1779_2|584591|organism=Nannochloropsis oceanica|type=polypeptide|length=249bp
MNFAPFEAGDGALLSAVTLGASPPQEVAQQNQPQTPQLHTAYLKTKLLTH
KTISSNITAGENEDIDLSCAVCLEEHTVPVVVVTSDCTHIFCKKCITCWL
SINHSSSHDQGPSCPLCKRPVTWLLSLSSSSPPTPPFRFVLLAVGPDAEL
LERQPWPSPALLQVSRQKLLDLFEARERRHQQRCQQQQQQQQQVKESKGE
DASKKSGKRRGYEPGAGVQQGRPLTESLQDELRRVNAEITLLKTKKKR* back to topmRNA from alignment at scaffold_7:677110..678472- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3110 ID=mRNA_3110|Name=jgi.p|Nanoce1779_2|584591|organism=Nannochloropsis oceanica|type=mRNA|length=1363bp|location=Sequence derived from alignment at scaffold_7:677110..678472- (Nannochloropsis oceanica)
ATATAGGAGGTCCTCGTTTCGATTGCGTTGCCTGCACGTTGGTCATGTTT
TCAATTAAACCCTTCTCATATACACGCAACTCAGGCAATACCTTGGTCTC
AATGCCCTGCAGCCACGCGGTGACGAGGCCGTGAGGCTGGCAAGCCAACT
AATAGAGCAAAGCCAAGGAATGGTATACGAAGAAGAAAGTGACGACGGGA
AGGGACTCGGTAGGATGGGCGACATGGCCACTATGACGACGACGACGCAG
CCCCGGTCGCACGACAGCATGCGAATGCGCCGACCCCCGACAACTGGGGA
GACGCTTGTGCCTCGTGGTTTTGAAAAGGTAGGTGGTGGAGCGTGTATCT
CTTTCACTGTTCTTGTGCCTCCATCCCTCACGACCTCCTCACCCTTCCAA
CACCCTCGATCCGAGATGGGTTCCCTTCTTAGATTTACCGATTTTAAACC
CTCTTCTTCCTCTTCCAGGTGGCCCATCCCCTCTTTCTCCTCCTGCGTGG
CCCTCCCCCACCAGACAAGCGCCCTCTCAAGATGAATTTTGCTCCTTTTG
AAGCAGGAGATGGAGCATTGCTTTCCGCAGTAACTCTGGGAGCATCGCCA
CCACAGGAAGTCGCCCAGCAGAACCAACCTCAAACTCCACAACTCCACAC
AGCATATCTTAAGACCAAACTCTTAACCCACAAGACTATTAGTTCGAATA
TAACTGCCGGGGAGAATGAGGATATCGACCTCTCATGCGCTGTGTGCCTG
GAAGAACACACCGTGCCCGTTGTCGTTGTCACCTCCGATTGCACCCACAT
ATTCTGCAAGAAGTGCATCACCTGCTGGTTGTCCATTAACCATTCATCCT
CGCATGACCAAGGACCGTCCTGCCCGCTCTGCAAACGCCCGGTCACCTGG
CTTCTCAGCCTCTCTTCCTCCTCCCCTCCAACTCCTCCGTTTCGATTCGT
TCTCCTAGCGGTAGGTCCCGATGCCGAGCTCCTAGAGCGACAGCCCTGGC
CGTCACCGGCGCTGCTACAGGTTTCTCGACAAAAGCTATTGGATTTGTTT
GAGGCACGGGAGCGACGGCACCAGCAGCGGTGCCAGCAGCAGCAGCAACA
GCAGCAGCAAGTAAAGGAGTCAAAAGGCGAAGACGCAAGCAAGAAAAGTG
GAAAGAGGAGAGGTTACGAGCCAGGGGCGGGCGTCCAGCAAGGTAGGCCC
TTGACTGAATCGCTCCAAGATGAATTGCGGCGTGTGAACGCAGAAATTAC
GCTCCTCAAAACCAAAAAGAAGAGATAATGAAGCTCAGGTAAATGCAGGG
TGTACCAGTTGTAAGACACGAAGCAATGTAGTCTATAATAGGAAAAAAGC
TATGCTGGCGCTC back to topCoding sequence (CDS) from alignment at scaffold_7:677110..678472- >mRNA_3110 ID=mRNA_3110|Name=jgi.p|Nanoce1779_2|584591|organism=Nannochloropsis oceanica|type=CDS|length=747bp|location=Sequence derived from alignment at scaffold_7:677110..678472- (Nannochloropsis oceanica)
ATGAATTTTGCTCCTTTTGAAGCAGGAGATGGAGCATTGCTTTCCGCAGT
AACTCTGGGAGCATCGCCACCACAGGAAGTCGCCCAGCAGAACCAACCTC
AAACTCCACAACTCCACACAGCATATCTTAAGACCAAACTCTTAACCCAC
AAGACTATTAGTTCGAATATAACTGCCGGGGAGAATGAGGATATCGACCT
CTCATGCGCTGTGTGCCTGGAAGAACACACCGTGCCCGTTGTCGTTGTCA
CCTCCGATTGCACCCACATATTCTGCAAGAAGTGCATCACCTGCTGGTTG
TCCATTAACCATTCATCCTCGCATGACCAAGGACCGTCCTGCCCGCTCTG
CAAACGCCCGGTCACCTGGCTTCTCAGCCTCTCTTCCTCCTCCCCTCCAA
CTCCTCCGTTTCGATTCGTTCTCCTAGCGGTAGGTCCCGATGCCGAGCTC
CTAGAGCGACAGCCCTGGCCGTCACCGGCGCTGCTACAGGTTTCTCGACA
AAAGCTATTGGATTTGTTTGAGGCACGGGAGCGACGGCACCAGCAGCGGT
GCCAGCAGCAGCAGCAACAGCAGCAGCAAGTAAAGGAGTCAAAAGGCGAA
GACGCAAGCAAGAAAAGTGGAAAGAGGAGAGGTTACGAGCCAGGGGCGGG
CGTCCAGCAAGGTAGGCCCTTGACTGAATCGCTCCAAGATGAATTGCGGC
GTGTGAACGCAGAAATTACGCTCCTCAAAACCAAAAAGAAGAGATAA back to top
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