Properties
| Property Name | Value |
|---|
| TranscriptId | 625319 |
| Track | FilteredModels2 |
| ProteinId | 625233 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:673235..674925 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3108 ID=mRNA_3108|Name=jgi.p|Nanoce1779_2|625233|organism=Nannochloropsis oceanica|type=mRNA|length=1093bp
AGTATCCGCATTTCCGCAACAACCAGCAGCACCATGTTCAAGGTCCTCAC
CGCCACGCTGGCGGTCGGTGCCACGGCGTTCATGCCTCCTACCCGCCCTG
CCATCAAAGCCGGCTACAACCAGCTGCTGAAGGATCAGCCTTTGCTTACC
AAAGCCTTGACCTCATTTGTGGGGTTTTCGGCGGGTGATTTGCTGGCGCA
AAAGTTCATTGACAAAAAGGACACGATTGACTTGAAGCGCCTGTTGAAGC
TTGCGTCGTTTGGGTTCTTGGTTCATGGTCCCACTGGCCACTATTTCTAT
GGCTTCTTGGATGGGAAGATGCCTGGCACCAGCGCTGCAACAGTGGCGTC
CAAGGTGGCGATTGACCAGTTGATCTGGAACCCTATCTTCGGGACGATGT
TTTTTGGCTGGTTGGGGTTGATGGAGGGACAGGATCTGGAAGGGATCAAG
ACCCGAATTCAGAAGGATTTGATGGCCTCGGTGAAAGGCTCCTGGACTGT
CTGGCCAATTGCGCACGCGATTAACTTCCGTTTCATTCCCAACTCCCAGC
GTTTGTTGTACATCAACACGGTTCAGATTGGATACAACTGCTTCTTGTCC
ATCTTAGCGAACAAGAACGTGGCGCCTGAGGCTGCCCCCGCCGTTTCTAA
GAAGTAAAGTGTGGTGATGTGTGGTGTGGTGCCGTGTGATTGACGGGGTT
CATAAAAGTATCATCTCCGTTTGAATATGAGGGGAGATGAAACTTGTTTC
TCTTTTCCTCTTGTCGCACGCGTTGCTAAACGCATTTTTCATCACAGGAA
ATAATCAAACAAAGGGAAAGAAAGAAAGAGAAGAACGATGAGTAAAACTA
AACGCCCAGGAAATGAGGAAGCACTTCAGACCATTCACTATATGTGTGTG
TGCTTTGTGTGTGTGCCTATTTTCTCCGTTCATAATTTGTTTCCGTGTGG
AGTGTCCATGTGTGTATTTGTCTTGGTGTGGTGCCGGTTGCGCAAGAAAG
AGAAAAAATGGGGAAAGAGACGGGTCGCGAATAAAATTGCAAACCCGTAC
CGTACCCTTCCCAAAAAAGAAGATATCAAGTGAAACGAAAGGA back to topprotein sequence of jgi.p|Nanoce1779_2|625233 >mRNA_3108-protein ID=mRNA_3108-protein|Name=jgi.p|Nanoce1779_2|625233|organism=Nannochloropsis oceanica|type=polypeptide|length=208bp
MFKVLTATLAVGATAFMPPTRPAIKAGYNQLLKDQPLLTKALTSFVGFSA
GDLLAQKFIDKKDTIDLKRLLKLASFGFLVHGPTGHYFYGFLDGKMPGTS
AATVASKVAIDQLIWNPIFGTMFFGWLGLMEGQDLEGIKTRIQKDLMASV
KGSWTVWPIAHAINFRFIPNSQRLLYINTVQIGYNCFLSILANKNVAPEA
APAVSKK* back to topmRNA from alignment at scaffold_7:673235..674925- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3108 ID=mRNA_3108|Name=jgi.p|Nanoce1779_2|625233|organism=Nannochloropsis oceanica|type=mRNA|length=1691bp|location=Sequence derived from alignment at scaffold_7:673235..674925- (Nannochloropsis oceanica)
AGTATCCGCATTTCCGCAACAACCAGCAGCACCATGTTCAAGGTCCTCAC
CGCCACGCTGGCGGTCGGTGCCACGGCGTTCATGCCTCCTACCCGCCCTG
CCATCAAAGCCGGTAAGTGATGGATCTGTTGTTTATGCGTATTCCGAGTC
GAAAGACGGAAGAATTTCCGCCGCGGCCTTCGTGACACCCGGCGAGGACT
CCCGAACCTCAAGGTGAACCTTTGTCAAGTGTGTCGTGTGTCTTGAGTAG
ACGCAAACCTGCGTGAGAGATAAAGGCGCAACCGTGGCACCTCTGGATGT
ATTTTGTGCCGGGGCAATGGTCGAAAATGAGGTCGGTCGTCCAGGTCACG
TGGTCACACCCTATGACAAGCTTCGGGAAGCCCGACGTGCTCGGACGAAA
CGGAGGGGAAACCCTATCCCTTCTTACCTCTCACCCCTCCCTCTGTCCTT
CCCTTTTGTCACAGTCCGCGGCCCATCCATGTCCATGATGACTGGTGCGA
CAACCGGGAAGATCGACCCCATGTTCGACGGCGCCAGCCCGATGTATCAA
GACATTCTCCGTCGCCGCCCCGAGACAGGCCACGGTGGTGGGATCATCAT
CGGCGGCGGTGGTGATGGGGAAGGCACCGGCGGTGGTGGTGGAGGCGGAG
GGGGTGGAAGCGGCGATGGGAACAAAGGCGGAGACAATCCCTTGGTGGTG
CTGTGGAAAGGCTACAACCAGCTGCTGAAGGATCAGCCTTTGCTTACCAA
AGCCTTGACCTCATTTGTGGGGTTTTCGGCGGGTGATTTGCTGGCGCAAA
AGTTCATTGACAAAAAGGACACGATTGACTTGAAGCGCCTGTTGAAGCTT
GCGTCGTTTGGGTTCTTGGTTCATGGTCCCACTGGCCACTATTTCTATGG
CTTCTTGGATGGGAAGATGCCTGGCACCAGCGCTGCAACAGTGGCGTCCA
AGGTGGCGATTGACCAGTTGATCTGGAACCCTATCTTCGGGACGATGTTT
TTTGGCTGGTTGGGGTTGATGGAGGGACAGGATCTGGAAGGGATCAAGAC
CCGAATTCAGAAGGATTTGATGGCCTCGGTGAAAGGCTCCTGGACTGTCT
GGCCAATTGCGCACGCGATTAACTTCCGTTTCATTCCCAACTCCCAGCGT
TTGTTGTACATCAACACGGTTCAGATTGGATACAACTGCTTCTTGTCCAT
CTTAGCGAACAAGAACGTGGCGCCTGAGGCTGCCCCCGCCGTTTCTAAGA
AGTAAAGTGTGGTGATGTGTGGTGTGGTGCCGTGTGATTGACGGGGTTCA
TAAAAGTATCATCTCCGTTTGAATATGAGGGGAGATGAAACTTGTTTCTC
TTTTCCTCTTGTCGCACGCGTTGCTAAACGCATTTTTCATCACAGGAAAT
AATCAAACAAAGGGAAAGAAAGAAAGAGAAGAACGATGAGTAAAACTAAA
CGCCCAGGAAATGAGGAAGCACTTCAGACCATTCACTATATGTGTGTGTG
CTTTGTGTGTGTGCCTATTTTCTCCGTTCATAATTTGTTTCCGTGTGGAG
TGTCCATGTGTGTATTTGTCTTGGTGTGGTGCCGGTTGCGCAAGAAAGAG
AAAAAATGGGGAAAGAGACGGGTCGCGAATAAAATTGCAAACCCGTACCG
TACCCTTCCCAAAAAAGAAGATATCAAGTGAAACGAAAGGA back to topCoding sequence (CDS) from alignment at scaffold_7:673235..674925- >mRNA_3108 ID=mRNA_3108|Name=jgi.p|Nanoce1779_2|625233|organism=Nannochloropsis oceanica|type=CDS|length=1248bp|location=Sequence derived from alignment at scaffold_7:673235..674925- (Nannochloropsis oceanica)
GCTACAACCAGCTGCTGAAGGATCAGCCTTTGCTTACCAAAGCCTTGACC
TCATTTGTGGGGTTTTCGGCGGGTGATTTGCTGGCGCAAAAGTTCATTGA
CAAAAAGGACACGATTGACTTGAAGCGCCTGTTGAAGCTTGCGTCGTTTG
GGTTCTTGGTTCATGGTCCCACTGGCCACTATTTCTATGGCTTCTTGGAT
GGGAAGATGCCTGGCACCAGCGCTGCAACAGTGGCGTCCAAGGTGGCGAT
TGACCAGTTGATCTGGAACCCTATCTTCGGGACGATGTTTTTTGGCTGGT
TGGGGTTGATGGAGGGACAGGATCTGGAAGGGATCAAGACCCGAATTCAG
AAGGATTTGATGGCCTCGGTGAAAGGCTCCTGGACTGTCTGGCCAATTGC
GCACGCGATTAACTTCCGTTTCATTCCCAACTCCCAGCGTTTGTTGTACA
TCAACACGGTTCAGATTGGATACAACTGCTTCTTGTCCATCTTAGCGAAC
AAGAACGTGGCGCCTGAGGCTGCCCCCGCCGTTTCTAAGAAGTAAATGTT
CAAGGTCCTCACCGCCACGCTGGCGGTCGGTGCCACGGCGTTCATGCCTC
CTACCCGCCCTGCCATCAAAGCCGGCTACAACCAGCTGCTGAAGGATCAG
CCTTTGCTTACCAAAGCCTTGACCTCATTTGTGGGGTTTTCGGCGGGTGA
TTTGCTGGCGCAAAAGTTCATTGACAAAAAGGACACGATTGACTTGAAGC
GCCTGTTGAAGCTTGCGTCGTTTGGGTTCTTGGTTCATGGTCCCACTGGC
CACTATTTCTATGGCTTCTTGGATGGGAAGATGCCTGGCACCAGCGCTGC
AACAGTGGCGTCCAAGGTGGCGATTGACCAGTTGATCTGGAACCCTATCT
TCGGGACGATGTTTTTTGGCTGGTTGGGGTTGATGGAGGGACAGGATCTG
GAAGGGATCAAGACCCGAATTCAGAAGGATTTGATGGCCTCGGTGAAAGG
CTCCTGGACTGTCTGGCCAATTGCGCACGCGATTAACTTCCGTTTCATTC
CCAACTCCCAGCGTTTGTTGTACATCAACACGGTTCAGATTGGATACAAC
TGCTTCTTGTCCATCTTAGCGAACAAGAACGTGGCGCCTGAGGCTGCCCC
CGCCGTTTCTAAGAAGTAAATGTTCAAGGTCCTCACCGCCACGCTGGCGG
TCGGTGCCACGGCGTTCATGCCTCCTACCCGCCCTGCCATCAAAGCCG back to top
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