Properties
Property Name | Value |
TranscriptId | 584609 |
Track | FilteredModels2 |
ProteinId | 584523 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_7 | supercontig | scaffold_7:631469..633634 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3089 ID=mRNA_3089|Name=jgi.p|Nanoce1779_2|584523|organism=Nannochloropsis oceanica|type=mRNA|length=1485bp ACAGCTTTACCCTCAGGGACGTCATGTTGCTGGCGTCGTCTCGGCGGCCG GCATCGTCCTTGGTGGATCCTTTGCCATTAACGGGGAAACTGCCTACCGG GGCAATCAGGCTTTTCACGTCCCGGCCTGCTTCCTGGCGTACAACTCCCA TGGTGGTGGGCGGGTCCTTGCTGGTGGTGGGATCATTCGTCTGGGTACCC CTAGTTATCTGGCTGGGTTGGAGGAAATGTGAGACACGGAAGCGACGCAT CATCTATGTCCTTGTTTTGTGTGTTGTTCTGACTCTACCTACACGACGGT GGGACGCGGTGGTCTTGAACGGCCTCTGGAGCCGTTTTGTGGAATATTTT TCAGTCGAGGTGGTGGGGGACGACCCCTTGCCCAAGGACCGCTCTGCGGT CTACGCCGTCATTCCTCACGGCACCTTCCCCTTTGGTCTCGGCGTGGTCT CCCTCGGTCCCTTGAACAAGATCTTCAATAAGGTTCGGCCCGTGGTGGCC TCGGCCGTCTTGCGCTTTCCGGGCTTCGGCCAACTTATAGGCTTCGCCGG CGGGGTAGATGCAGGGCCTAATGAAGTAAGCAAGGCCATCAAGGAGGGCT GTTCAGTGAGTATCTGTCCGGGGGGCATCGCAGAGATGTTCTGGGGATAT CCAAAGGAGGGCTGCTTACCGCGGGAGGAATACGCGTTCTTGCAGTCGAG GAAAGGGTTTATACGAATGGCCATGAAACATAATGTGCCTGTGATCCCTG TATACTGTTTTGGTAACACCCATGCGATGCATAAGGCTAAGACGCCTTGG GTCTTGGAGGCGCTCTCAAGGCTTCTGAAGACCTCTCTCATATTGACTTG GGGCCGGTGGGGGCTGCCCATTCCCTACCGTGTGCCTCTCCTCTATGCCG TCGGCAAGCCCCTCCACCTCCTGCATGCTGAAAATCCAACCCCTGGTCAG ATTGAGGTGGCGCACGCCGAGTTCTGCAGGGCCCTTTCGGATTTGTTCGA TCGGTACAAGTTTTATTATGGATGGGGGCACAAGACGCTTCGCATCGTCT GAGAAGGGGGAAGGAGAGAGAGGTCTTAGGTGATGGGGGGACAAGCTTGT CATGGAAGAAGAGAGGCCGCTGCTGCTTGGGGGGCTCACGAGGGAGAAGG AGGGAGCAGAGAGTAGGAAAACCAAATTACAAAATCTGTTTCCTTCATCA AGACCCAGGGATTAATAACTTCGTGTGTAAAGTACTAAAGCGAAGAGCCC GGCTCTTGCTTATATTTCTATAAAACAAAGATAACCAATGAATGTGTATC ACCACACGGAACGGGAAATAAGGGAAGACAAGGGTAAAGGCACGTACGTG CTTTGGATGTGTCCCTTTTCTTTTCGGGTCGTCTCTCTGCATGAATATTA TATTTTAAGTTACCCCCTTCAGTATTTTTCTGATTTTCTTAGTCTTCATG CAGATGCTGCCCTCCTCCTGCTCCTCCTCCTCCAG back to topprotein sequence of jgi.p|Nanoce1779_2|584523 >mRNA_3089-protein ID=mRNA_3089-protein|Name=jgi.p|Nanoce1779_2|584523|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp MLLASSRRPASSLVDPLPLTGKLPTGAIRLFTSRPASWRTTPMVVGGSLL VVGSFVWVPLVIWLGWRKCETRKRRIIYVLVLCVVLTLPTRRWDAVVLNG LWSRFVEYFSVEVVGDDPLPKDRSAVYAVIPHGTFPFGLGVVSLGPLNKI FNKVRPVVASAVLRFPGFGQLIGFAGGVDAGPNEVSKAIKEGCSVSICPG GIAEMFWGYPKEGCLPREEYAFLQSRKGFIRMAMKHNVPVIPVYCFGNTH AMHKAKTPWVLEALSRLLKTSLILTWGRWGLPIPYRVPLLYAVGKPLHLL HAENPTPGQIEVAHAEFCRALSDLFDRYKFYYGWGHKTLRIV* back to topmRNA from alignment at scaffold_7:631469..633634+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3089 ID=mRNA_3089|Name=jgi.p|Nanoce1779_2|584523|organism=Nannochloropsis oceanica|type=mRNA|length=2166bp|location=Sequence derived from alignment at scaffold_7:631469..633634+ (Nannochloropsis oceanica) ACAGCTTTACCCTCAGGGACGTCATGTTGCTGGCGTCGTCTCGGCGGCCG
GCATCGTCCTTGGTGGATCCTTTGCCATTAACGGGGAAACTGCCTACCGG
GGCAATCAGGCTTTTCACGTCCCGGCCTGCTTCCTGGCGTACAACTCCCA
TGGGTACGTATGCATATTTATAGCGACAGTTTGATAGGCGATCTTGGATA
TAGACCGTTGGGCTATTGTGAACAAGAGAGGTCCAGTTTTGTCTGCATTT
GACTTAGATGCATCACCTTACCCGCGCACACCCTCACTCCGCTCACAAAC
AGTGGTGGGCGGGTCCTTGCTGGTGGTGGGATCATTCGTCTGGGTACCCC
TAGTTATCTGGCTGGGTTGGAGGTAAGTACCTGCAGCAGTCGGTTTAGTA
ATTTGGTGAGCGTGGCTGATTCGATTGCTTTCTCGTCCCCCCCCTCCCCT
ACGCACTCACACATTCACACACACATATCAACAGGAAATGTGAGACACGG
AAGCGACGCATCATCTATGTCCTTGTTTTGTGTGTTGTTCTGACTCTACC
TACACGACGGTGGGACGCGGTGGTCTTGAACGGCCTCTGGAGCCGTTTTG
TGGAATATTTTTCAGTCGAGGTGGTGGGGGACGACCCCTTGCCCAAGGAC
CGCTCTGCGGTCTACGCCGTCATTCCTCACGGCACCTTCCCCTTTGGTCT
CGGCGTGGTGAGTGGTTGTAAACGACACAGAGTCCAGGAGCAATGCTTTT
CGCTCTTTACGCTCGCCTGATTTTTGTCTGTCTGTCCCACCCTTGTCTCC
CTAAGGTCTCCCTCGGTCCCTTGAACAAGATCTTCAATAAGGTTCGGCCC
GTGGTGGCCTCGGCCGTCTTGCGCTTTCCGGTAAGCAAGAGCTTGAAGTG
CGGCAATAACCTGTGTTACAACGACAATCTCTTCCTCCTGTTTCTGCATC
ATATAAGCACTCCTCAATCGCCCCCAACACACACCTCGTCCTCCTTCATT
TCTTCCCTCCATACCATTTCTGCCCCCCCCACCAAAACAGGGCTTCGGCC
AACTTATAGGCTTCGCCGGCGGGGTAGATGCAGGGCCTAATGAAGTAAGC
AAGGCCATCAAGGAGGGCTGTTCAGTGAGTATCTGTCCGGGGGGCATCGC
AGAGATGTTCTGGGGATATCCAAAGGAGGGCTGCTTACCGCGGGAGGAAT
ACGCGTTCTTGCAGTCGAGGAAAGGGTTTATACGAATGGCCATGAAACAT
AATGTGCCTGTGATCCCTGTATACTGTTTTGGTAACACCCATGCGATGCA
TAAGGCTAAGACGCCTTGGGTCTTGGAGGCGCTCTCAAGGTCAGTAACAG
GGGAAGTGTGGGGGGGATGGGAGACGGCCGGGTGAAATCATTCTGGGTTT
TTTGTAACCACGTCTGCGAGGCTGTCTTCAATCTTCTTCCACACGAAAGC
ACTCACTTTTTCTTTAATATTTGCGTTGCCTTTCCTCGCATATTATATTA
GGCTTCTGAAGACCTCTCTCATATTGACTTGGGGCCGGTGGGGGCTGCCC
ATTCCCTACCGTGTGCCTCTCCTCTATGCCGTCGGCAAGCCCCTCCACCT
CCTGCATGCTGAAAATCCAACCCCTGGTCAGATTGAGGTGGCGCACGCCG
AGTTCTGCAGGGCCCTTTCGGATTTGTTCGATCGGTACAAGTTTTATTAT
GGATGGGGGCACAAGACGCTTCGCATCGTCTGAGAAGGGGGAAGGAGAGA
GAGGTCTTAGGTGATGGGGGGACAAGCTTGTCATGGAAGAAGAGAGGCCG
CTGCTGCTTGGGGGGCTCACGAGGGAGAAGGAGGGAGCAGAGAGTAGGAA
AACCAAATTACAAAATCTGTTTCCTTCATCAAGACCCAGGGATTAATAAC
TTCGTGTGTAAAGTACTAAAGCGAAGAGCCCGGCTCTTGCTTATATTTCT
ATAAAACAAAGATAACCAATGAATGTGTATCACCACACGGAACGGGAAAT
AAGGGAAGACAAGGGTAAAGGCACGTACGTGCTTTGGATGTGTCCCTTTT
CTTTTCGGGTCGTCTCTCTGCATGAATATTATATTTTAAGTTACCCCCTT
CAGTATTTTTCTGATTTTCTTAGTCTTCATGCAGATGCTGCCCTCCTCCT
GCTCCTCCTCCTCCAG back to topCoding sequence (CDS) from alignment at scaffold_7:631469..633634+ >mRNA_3089 ID=mRNA_3089|Name=jgi.p|Nanoce1779_2|584523|organism=Nannochloropsis oceanica|type=CDS|length=6174bp|location=Sequence derived from alignment at scaffold_7:631469..633634+ (Nannochloropsis oceanica) ATGTTGCTGGCGTCGTCTCGGCGGCCGGCATCGTCCTTGGTGGATCCTTT GCCATTAACGGGGAAACTGCCTACCGGGGCAATCAGGCTTTTCACGTCCC GGCCTGCTTCCTGGCGTACAACTCCCATGGTGGTGGGCGGGTCCTTGCTG GTGGTGGGATCATTCGTCTGGGTACCCCTAGTTATCTGGCTGGGTTGGAG GAAATGTGAGACACGGAAGCGACGCATCATCTATGTCCTTGTTTTGTGTG TTGTTCTGACTCTACCTACACGACGGTGGGACGCGGTGGTCTTGAACGGC CTCTGGAGCCGTTTTGTGGAATATTTTTCAGTCGAGGTGGTGGGGGACGA CCCCTTGCCCAAGGACCGCTCTGCGGTCTACGCCGTCATTCCTCACGGCA CCTTCCCCTTTGGTCTCGGCGTGGTCTCCCTCGGTCCCTTGAACAAGATC TTCAATAAGGTTCGGCCCGTGGTGGCCTCGGCCGTCTTGCGCTTTCCGGG CTTCGGCCAACTTATAGGCTTCGCCGGCGGGGTAGATGCAGGGCCTAATG AAGTAAGCAAGGCCATCAAGGAGGGCTGTTCAGTGAGTATCTGTCCGGGG GGCATCGCAGAGATGTTCTGGGGATATCCAAAGGAGGGCTGCTTACCGCG GGAGGAATACGCGTTCTTGCAGTCGAGGAAAGGGTTTATACGAATGGCCA TGAAACATAATGTGCCTGTGATCCCTGTATACTGTTTTGGTAACACCCAT GCGATGCATAAGGCTAAGACGCCTTGGGTCTTGGAGGCGCTCTCAAGGCT TCTGAAGACCTCTCTCATATTGACTTGGGGCCGGTGGGGGCTGCCCATTC CCTACCGTGTGCCTCTCCTCTATGCCGTCGGCAAGCCCCTCCACCTCCTG CATGCTGAAAATCCAACCCCTGGTCAGATTGAGGTGGCGCACGCCGAGTT CTGCAGGGCCCTTTCGGATTTGTTCGATCGGTACAAGTTTTATTATGGAT GGGGGCACAAGACGCTTCGCATCGTCTGAATGTTGCTGGCGTCGTCTCGG CGGCCGGCATCGTCCTTGGTGGATCCTTTGCCATTAACGGGGAAACTGCC TACCGGGGCAATCAGGCTTTTCACGTCCCGGCCTGCTTCCTGGCGTACAA CTCCCATGGTGGTGGGCGGGTCCTTGCTGGTGGTGGGATCATTCGTCTGG GTACCCCTAGTTATCTGGCTGGGTTGGAGGAAATGTGAGACACGGAAGCG ACGCATCATCTATGTCCTTGTTTTGTGTGTTGTTCTGACTCTACCTACAC GACGGTGGGACGCGGTGGTCTTGAACGGCCTCTGGAGCCGTTTTGTGGAA TATTTTTCAGTCGAGGTGGTGGGGGACGACCCCTTGCCCAAGGACCGCTC TGCGGTCTACGCCGTCATTCCTCACGGCACCTTCCCCTTTGGTCTCGGCG TGGTCTCCCTCGGTCCCTTGAACAAGATCTTCAATAAGGTTCGGCCCGTG GTGGCCTCGGCCGTCTTGCGCTTTCCGGGCTTCGGCCAACTTATAGGCTT CGCCGGCGGGGTAGATGCAGGGCCTAATGAAGTAAGCAAGGCCATCAAGG AGGGCTGTTCAGTGAGTATCTGTCCGGGGGGCATCGCAGAGATGTTCTGG GGATATCCAAAGGAGGGCTGCTTACCGCGGGAGGAATACGCGTTCTTGCA GTCGAGGAAAGGGTTTATACGAATGGCCATGAAACATAATGTGCCTGTGA TCCCTGTATACTGTTTTGGTAACACCCATGCGATGCATAAGGCTAAGACG CCTTGGGTCTTGGAGGCGCTCTCAAGGCTTCTGAAGACCTCTCTCATATT GACTTGGGGCCGGTGGGGGCTGCCCATTCCCTACCGTGTGCCTCTCCTCT ATGCCGTCGGCAAGCCCCTCCACCTCCTGCATGCTGAAAATCCAACCCCT GGTCAGATTGAGGTGGCGCACGCCGAGTTCTGCAGGGCCCTTTCGGATTT GTTCGATCGGTACAAGTTTTATTATGGATGGGGGCACAAGACGCTTCGCA TCGTCTGAATGTTGCTGGCGTCGTCTCGGCGGCCGGCATCGTCCTTGGTG GATCCTTTGCCATTAACGGGGAAACTGCCTACCGGGGCAATCAGGCTTTT CACGTCCCGGCCTGCTTCCTGGCGTACAACTCCCATGGTGGTGGGCGGGT CCTTGCTGGTGGTGGGATCATTCGTCTGGGTACCCCTAGTTATCTGGCTG GGTTGGAGGAAATGTGAGACACGGAAGCGACGCATCATCTATGTCCTTGT TTTGTGTGTTGTTCTGACTCTACCTACACGACGGTGGGACGCGGTGGTCT TGAACGGCCTCTGGAGCCGTTTTGTGGAATATTTTTCAGTCGAGGTGGTG GGGGACGACCCCTTGCCCAAGGACCGCTCTGCGGTCTACGCCGTCATTCC TCACGGCACCTTCCCCTTTGGTCTCGGCGTGGTCTCCCTCGGTCCCTTGA ACAAGATCTTCAATAAGGTTCGGCCCGTGGTGGCCTCGGCCGTCTTGCGC TTTCCGGGCTTCGGCCAACTTATAGGCTTCGCCGGCGGGGTAGATGCAGG GCCTAATGAAGTAAGCAAGGCCATCAAGGAGGGCTGTTCAGTGAGTATCT GTCCGGGGGGCATCGCAGAGATGTTCTGGGGATATCCAAAGGAGGGCTGC TTACCGCGGGAGGAATACGCGTTCTTGCAGTCGAGGAAAGGGTTTATACG AATGGCCATGAAACATAATGTGCCTGTGATCCCTGTATACTGTTTTGGTA ACACCCATGCGATGCATAAGGCTAAGACGCCTTGGGTCTTGGAGGCGCTC TCAAGGCTTCTGAAGACCTCTCTCATATTGACTTGGGGCCGGTGGGGGCT GCCCATTCCCTACCGTGTGCCTCTCCTCTATGCCGTCGGCAAGCCCCTCC ACCTCCTGCATGCTGAAAATCCAACCCCTGGTCAGATTGAGGTGGCGCAC GCCGAGTTCTGCAGGGCCCTTTCGGATTTGTTCGATCGGTACAAGTTTTA TTATGGATGGGGGCACAAGACGCTTCGCATCGTCTGAATGTTGCTGGCGT CGTCTCGGCGGCCGGCATCGTCCTTGGTGGATCCTTTGCCATTAACGGGG AAACTGCCTACCGGGGCAATCAGGCTTTTCACGTCCCGGCCTGCTTCCTG GCGTACAACTCCCATGGTGGTGGGCGGGTCCTTGCTGGTGGTGGGATCAT TCGTCTGGGTACCCCTAGTTATCTGGCTGGGTTGGAGGAAATGTGAGACA CGGAAGCGACGCATCATCTATGTCCTTGTTTTGTGTGTTGTTCTGACTCT ACCTACACGACGGTGGGACGCGGTGGTCTTGAACGGCCTCTGGAGCCGTT TTGTGGAATATTTTTCAGTCGAGGTGGTGGGGGACGACCCCTTGCCCAAG GACCGCTCTGCGGTCTACGCCGTCATTCCTCACGGCACCTTCCCCTTTGG TCTCGGCGTGGTCTCCCTCGGTCCCTTGAACAAGATCTTCAATAAGGTTC GGCCCGTGGTGGCCTCGGCCGTCTTGCGCTTTCCGGGCTTCGGCCAACTT ATAGGCTTCGCCGGCGGGGTAGATGCAGGGCCTAATGAAGTAAGCAAGGC CATCAAGGAGGGCTGTTCAGTGAGTATCTGTCCGGGGGGCATCGCAGAGA TGTTCTGGGGATATCCAAAGGAGGGCTGCTTACCGCGGGAGGAATACGCG TTCTTGCAGTCGAGGAAAGGGTTTATACGAATGGCCATGAAACATAATGT GCCTGTGATCCCTGTATACTGTTTTGGTAACACCCATGCGATGCATAAGG CTAAGACGCCTTGGGTCTTGGAGGCGCTCTCAAGGCTTCTGAAGACCTCT CTCATATTGACTTGGGGCCGGTGGGGGCTGCCCATTCCCTACCGTGTGCC TCTCCTCTATGCCGTCGGCAAGCCCCTCCACCTCCTGCATGCTGAAAATC CAACCCCTGGTCAGATTGAGGTGGCGCACGCCGAGTTCTGCAGGGCCCTT TCGGATTTGTTCGATCGGTACAAGTTTTATTATGGATGGGGGCACAAGAC GCTTCGCATCGTCTGAATGTTGCTGGCGTCGTCTCGGCGGCCGGCATCGT CCTTGGTGGATCCTTTGCCATTAACGGGGAAACTGCCTACCGGGGCAATC AGGCTTTTCACGTCCCGGCCTGCTTCCTGGCGTACAACTCCCATGGTGGT GGGCGGGTCCTTGCTGGTGGTGGGATCATTCGTCTGGGTACCCCTAGTTA TCTGGCTGGGTTGGAGGAAATGTGAGACACGGAAGCGACGCATCATCTAT GTCCTTGTTTTGTGTGTTGTTCTGACTCTACCTACACGACGGTGGGACGC GGTGGTCTTGAACGGCCTCTGGAGCCGTTTTGTGGAATATTTTTCAGTCG AGGTGGTGGGGGACGACCCCTTGCCCAAGGACCGCTCTGCGGTCTACGCC GTCATTCCTCACGGCACCTTCCCCTTTGGTCTCGGCGTGGTCTCCCTCGG TCCCTTGAACAAGATCTTCAATAAGGTTCGGCCCGTGGTGGCCTCGGCCG TCTTGCGCTTTCCGGGCTTCGGCCAACTTATAGGCTTCGCCGGCGGGGTA GATGCAGGGCCTAATGAAGTAAGCAAGGCCATCAAGGAGGGCTGTTCAGT GAGTATCTGTCCGGGGGGCATCGCAGAGATGTTCTGGGGATATCCAAAGG AGGGCTGCTTACCGCGGGAGGAATACGCGTTCTTGCAGTCGAGGAAAGGG TTTATACGAATGGCCATGAAACATAATGTGCCTGTGATCCCTGTATACTG TTTTGGTAACACCCATGCGATGCATAAGGCTAAGACGCCTTGGGTCTTGG AGGCGCTCTCAAGGCTTCTGAAGACCTCTCTCATATTGACTTGGGGCCGG TGGGGGCTGCCCATTCCCTACCGTGTGCCTCTCCTCTATGCCGTCGGCAA GCCCCTCCACCTCCTGCATGCTGAAAATCCAACCCCTGGTCAGATTGAGG TGGCGCACGCCGAGTTCTGCAGGGCCCTTTCGGATTTGTTCGATCGGTAC AAGTTTTATTATGGATGGGGGCACAAGACGCTTCGCATCGTCTGAATGTT GCTGGCGTCGTCTCGGCGGCCGGCATCGTCCTTGGTGGATCCTTTGCCAT TAACGGGGAAACTGCCTACCGGGGCAATCAGGCTTTTCACGTCCCGGCCT GCTTCCTGGCGTACAACTCCCATGGTGGTGGGCGGGTCCTTGCTGGTGGT GGGATCATTCGTCTGGGTACCCCTAGTTATCTGGCTGGGTTGGAGGAAAT GTGAGACACGGAAGCGACGCATCATCTATGTCCTTGTTTTGTGTGTTGTT CTGACTCTACCTACACGACGGTGGGACGCGGTGGTCTTGAACGGCCTCTG GAGCCGTTTTGTGGAATATTTTTCAGTCGAGGTGGTGGGGGACGACCCCT TGCCCAAGGACCGCTCTGCGGTCTACGCCGTCATTCCTCACGGCACCTTC CCCTTTGGTCTCGGCGTGGTCTCCCTCGGTCCCTTGAACAAGATCTTCAA TAAGGTTCGGCCCGTGGTGGCCTCGGCCGTCTTGCGCTTTCCGGGCTTCG GCCAACTTATAGGCTTCGCCGGCGGGGTAGATGCAGGGCCTAATGAAGTA AGCAAGGCCATCAAGGAGGGCTGTTCAGTGAGTATCTGTCCGGGGGGCAT CGCAGAGATGTTCTGGGGATATCCAAAGGAGGGCTGCTTACCGCGGGAGG AATACGCGTTCTTGCAGTCGAGGAAAGGGTTTATACGAATGGCCATGAAA CATAATGTGCCTGTGATCCCTGTATACTGTTTTGGTAACACCCATGCGAT GCATAAGGCTAAGACGCCTTGGGTCTTGGAGGCGCTCTCAAGGCTTCTGA AGACCTCTCTCATATTGACTTGGGGCCGGTGGGGGCTGCCCATTCCCTAC CGTGTGCCTCTCCTCTATGCCGTCGGCAAGCCCCTCCACCTCCTGCATGC TGAAAATCCAACCCCTGGTCAGATTGAGGTGGCGCACGCCGAGTTCTGCA GGGCCCTTTCGGATTTGTTCGATCGGTACAAGTTTTATTATGGATGGGGG CACAAGACGCTTCGCATCGTCTGA back to top
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