Properties
| Property Name | Value |
|---|
| TranscriptId | 584595 |
| Track | FilteredModels2 |
| ProteinId | 584509 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:625063..626307 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3085 ID=mRNA_3085|Name=jgi.p|Nanoce1779_2|584509|organism=Nannochloropsis oceanica|type=mRNA|length=1042bp
AGGCTGCCCCAGTCAATGCCGCCATCTTCGCCTCGGCCCTTAAACTAGAA
CGACTCACCCGCGTCAAGGTGGGGGGAGTTTCCCTGGCCGTGGCAGGTGC
CTTGGTCATTCTCTGGCCGGACAAAATAGCCTTGACCAATGGGCGTCCTG
ACGAAATACCCGCGGGGATTTGCGTGATTGTGATACAGACCATGTGGTAT
GCCGCGCTTTTGGTCGCATTAAAAATCAAGCTGCAAACACATCCAAACCC
TTTCGGTCTATATGCTTATGCTTCTTTGACGGGCGCAATCGTTATCGCAT
TCGCGGGTGTTGTGAGTGGAAGTATCTATTTTGATCCAAACATTGTGCCC
CGGAGTGCGTGGTTCGCTGTCCTCAATTGCGGCTTCGCCATTTCCTTCTT
TGCGCATGCCTGTCAGTCCTGGGCGGTCGCGCACACCTCAGCATCTTTCC
CCTCTCTCTTCAATTGCCTGTCCCCCTCTTTCACCGGCTTTCTCGCCCAT
GTTTTTCTTGAGGAAAGGTTGGGCTTGCCGAGCGACATCATGGGTCTACC
ATTAAACGTGTCAGGTCTCTTTGCCGTCGTTTTTTCCAAGATGAGGCTAG
AGGGGCCCATGTCAGCAATCGCAACTGCCTCAGACAAGGATACAGTCAAT
GAGATTGGGATGGATGCAGTCCTTCCCGATACAGTAGCACCACCAGCTGG
TAGACTGAGCCTTAGTCGGTCTGGGACGCTCAGACAGTCTCTGAAGAACC
TTCCTCACGACCCGCCACACCGGCAGCAAATAAGAGACATTATGTGTGTT
ACAAAGGGGGTTGTAAAGAAATGGAGAGCGACACTCGGGGGGAGAAAACT
ATGCGTGCATATACAGACTTGCAGTGAGAGAGGGGCAATTTTGACAAAGG
AATGGAAGGTACCACTTCGTCATTGCCAAATAAAGCCACGCATACATATG
CTGACAAAGAAGGAATAATAATATGATTATAATTATTATAAATCCTCACT
AGAAGGAGAAAGGCCCCTCTGCGAGGAAATGGTGGAAATCGG back to topprotein sequence of jgi.p|Nanoce1779_2|584509 >mRNA_3085-protein ID=mRNA_3085-protein|Name=jgi.p|Nanoce1779_2|584509|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MWYAALLVALKIKLQTHPNPFGLYAYASLTGAIVIAFAGVVSGSIYFDPN
IVPRSAWFAVLNCGFAISFFAHACQSWAVAHTSASFPSLFNCLSPSFTGF
LAHVFLEERLGLPSDIMGLPLNVSGLFAVVFSKMRLEGPMSAIATASDKD
TVNEIGMDAVLPDTVAPPAGRLSLSRSGTLRQSLKNLPHDPPHRQQIRDI
MCVTKGVVKKWRATLGGRKLCVHIQTCSERGAILTKEWKVPLRHCQIKPR
IHMLTKKE* back to topmRNA from alignment at scaffold_7:625063..626307- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3085 ID=mRNA_3085|Name=jgi.p|Nanoce1779_2|584509|organism=Nannochloropsis oceanica|type=mRNA|length=1245bp|location=Sequence derived from alignment at scaffold_7:625063..626307- (Nannochloropsis oceanica)
AGGCTGCCCCAGTCAATGCCGCCATCTTCGCCTCGGCCCTTAAACTAGAA
CGACTCACCCGCGTCAAGGTGGGGGGAGTTTCCCTGGCCGTGGCAGGTGC
CTTGGTCATTCTCTGGCCGGACAAAATAGCCTTGACCAATGGGCGTCCTG
ACGAAATACCCGCGGGGATTTGCGTGATTGTGATACAGACCATGTGGTAT
GCCGCGCTTTTGGTCGCATTAAAAATCAAGCTGCAAACACATCCAAACCC
TTTCGGTCTATATGCTTATGCTTCTTTGACGGGCGCAATCGTTATCGCAT
TCGCGGGTGTTGTGAGTGGAAGTATCTATTTTGATCCAAACATTGTGCCC
CGGAGTGCGTGGTTCGCTGTCCTCAATTGCGGCTTCGCCATTTCCTTCTT
TGCGCATGCCTGTCAGTCCTGGTACGTTCTTTCTTGAACGAATGGATGAA
GGATTCGAAATTAAGGGATATGATGGTGCAGGATGTAAACGACGAATTGA
AATTCGCCACTCACACAGTAAATGCGATACACATCTTCCAGTTTTACTCT
CTCATCCTCTTTCTTAGTGCAGTGCTTTCGGCTGCCTTACATCAACCCCT
AACGCTTCTCAACTGAACCCACAGGGCGGTCGCGCACACCTCAGCATCTT
TCCCCTCTCTCTTCAATTGCCTGTCCCCCTCTTTCACCGGCTTTCTCGCC
CATGTTTTTCTTGAGGAAAGGTTGGGCTTGCCGAGCGACATCATGGGTCT
ACCATTAAACGTGTCAGGTCTCTTTGCCGTCGTTTTTTCCAAGATGAGGC
TAGAGGGGCCCATGTCAGCAATCGCAACTGCCTCAGACAAGGATACAGTC
AATGAGATTGGGATGGATGCAGTCCTTCCCGATACAGTAGCACCACCAGC
TGGTAGACTGAGCCTTAGTCGGTCTGGGACGCTCAGACAGTCTCTGAAGA
ACCTTCCTCACGACCCGCCACACCGGCAGCAAATAAGAGACATTATGTGT
GTTACAAAGGGGGTTGTAAAGAAATGGAGAGCGACACTCGGGGGGAGAAA
ACTATGCGTGCATATACAGACTTGCAGTGAGAGAGGGGCAATTTTGACAA
AGGAATGGAAGGTACCACTTCGTCATTGCCAAATAAAGCCACGCATACAT
ATGCTGACAAAGAAGGAATAATAATATGATTATAATTATTATAAATCCTC
ACTAGAAGGAGAAAGGCCCCTCTGCGAGGAAATGGTGGAAATCGG back to topCoding sequence (CDS) from alignment at scaffold_7:625063..626307- >mRNA_3085 ID=mRNA_3085|Name=jgi.p|Nanoce1779_2|584509|organism=Nannochloropsis oceanica|type=CDS|length=1554bp|location=Sequence derived from alignment at scaffold_7:625063..626307- (Nannochloropsis oceanica)
GGCGGTCGCGCACACCTCAGCATCTTTCCCCTCTCTCTTCAATTGCCTGT
CCCCCTCTTTCACCGGCTTTCTCGCCCATGTTTTTCTTGAGGAAAGGTTG
GGCTTGCCGAGCGACATCATGGGTCTACCATTAAACGTGTCAGGTCTCTT
TGCCGTCGTTTTTTCCAAGATGAGGCTAGAGGGGCCCATGTCAGCAATCG
CAACTGCCTCAGACAAGGATACAGTCAATGAGATTGGGATGGATGCAGTC
CTTCCCGATACAGTAGCACCACCAGCTGGTAGACTGAGCCTTAGTCGGTC
TGGGACGCTCAGACAGTCTCTGAAGAACCTTCCTCACGACCCGCCACACC
GGCAGCAAATAAGAGACATTATGTGTGTTACAAAGGGGGTTGTAAAGAAA
TGGAGAGCGACACTCGGGGGGAGAAAACTATGCGTGCATATACAGACTTG
CAGTGAGAGAGGGGCAATTTTGACAAAGGAATGGAAGGTACCACTTCGTC
ATTGCCAAATAAAGCCACGCATACATATGCTGACAAAGAAGGAATAAATG
TGGTATGCCGCGCTTTTGGTCGCATTAAAAATCAAGCTGCAAACACATCC
AAACCCTTTCGGTCTATATGCTTATGCTTCTTTGACGGGCGCAATCGTTA
TCGCATTCGCGGGTGTTGTGAGTGGAAGTATCTATTTTGATCCAAACATT
GTGCCCCGGAGTGCGTGGTTCGCTGTCCTCAATTGCGGCTTCGCCATTTC
CTTCTTTGCGCATGCCTGTCAGTCCTGGGCGGTCGCGCACACCTCAGCAT
CTTTCCCCTCTCTCTTCAATTGCCTGTCCCCCTCTTTCACCGGCTTTCTC
GCCCATGTTTTTCTTGAGGAAAGGTTGGGCTTGCCGAGCGACATCATGGG
TCTACCATTAAACGTGTCAGGTCTCTTTGCCGTCGTTTTTTCCAAGATGA
GGCTAGAGGGGCCCATGTCAGCAATCGCAACTGCCTCAGACAAGGATACA
GTCAATGAGATTGGGATGGATGCAGTCCTTCCCGATACAGTAGCACCACC
AGCTGGTAGACTGAGCCTTAGTCGGTCTGGGACGCTCAGACAGTCTCTGA
AGAACCTTCCTCACGACCCGCCACACCGGCAGCAAATAAGAGACATTATG
TGTGTTACAAAGGGGGTTGTAAAGAAATGGAGAGCGACACTCGGGGGGAG
AAAACTATGCGTGCATATACAGACTTGCAGTGAGAGAGGGGCAATTTTGA
CAAAGGAATGGAAGGTACCACTTCGTCATTGCCAAATAAAGCCACGCATA
CATATGCTGACAAAGAAGGAATAAATGTGGTATGCCGCGCTTTTGGTCGC
ATTAAAAATCAAGCTGCAAACACATCCAAACCCTTTCGGTCTATATGCTT
ATGCTTCTTTGACGGGCGCAATCGTTATCGCATTCGCGGGTGTTGTGAGT
GGAAGTATCTATTTTGATCCAAACATTGTGCCCCGGAGTGCGTGGTTCGC
TGTCCTCAATTGCGGCTTCGCCATTTCCTTCTTTGCGCATGCCTGTCAGT
CCTG back to top
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