Properties
| Property Name | Value |
|---|
| TranscriptId | 584590 |
| Track | FilteredModels2 |
| ProteinId | 584504 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:622600..623962 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3083 ID=mRNA_3083|Name=jgi.p|Nanoce1779_2|584504|organism=Nannochloropsis oceanica|type=mRNA|length=1234bp
GTCAACGACGTGATGGTAAGAAAACCTTCGTTTCTGGCACTGCCTGGCTG
TCACGTCGGCTGCCTTCTCGACAAAGTCGGTGAAGAAACTGTTTTTGTCA
CAAGAAGCACTTTTAACGAGATTTTTGGGCGGGGCAGGAGAAGCACGCGT
GACATCCCCACCCCTCCCAGTCGCCCAACATATACACAGCACATTACTCA
GTCATGCGTCGTGGGCGGCTCCTGCTGCTAGCCTGCATTACGACCGCCCT
GGTCTCGTTGTCAGTGACGAATGCTTTTGTCCTGAAACCACTTGGCTCGA
GCACCAATTATCGGTCCAGTTTCTGCTTCCCCACCAAGCCTCATCGGTCT
AACGGTGCGTCATCGTCGTTGCTACCTCAGCACCTGACGGTGGGCGGTGA
GGACCCAAGTGGTCTCGATTTACAAAGCGTGTGGAATACTGCCACTGGTG
TCGGCGCACTCGTGGTGGGTGCATTGGTACTAGCGGATATTGTTGACACC
TGGCCCCGAGGTTCGGTTAACACGAAGCTAGTGGAGGCCGCACAATCCAC
TTTAGGTCCTCAAGCAGGGCGAGGACTCTTTGCTCTCGAAAACATTCCCA
AGGACACAACCATTGGTAAATTTCCTGGTGTCATCTCGCGACGCAAAAAC
TGGGTTTCAACAAAGGATAGTGAAGAGGCAGCTGTCCGGGCAAGCAGATA
CACATGGACGCTTGCCAACACGGATATTCTCGACCCCACGCTGAGTAATG
GACAGTTGCCCGAGGAGCTACTCTTCTATGGAGGCCTGCTGCGTAAGTCT
ACGCTTCTCGCCTTGGTTAACGAGCCCCGCGCGGGGTATGACTTGAATGT
TGTCGCTGTTGTGAGCGATCGAGATGTGGCGTACGTTGCAGAACGAAACA
TTTATAAAGGTGAAGAGCTAATGACTGACTACGGCCCCATGTACAACAGA
CGGCACTACCGCCAGTAAAGCTCGCCATAAAATGATTAATAAAATATGTC
GATTTGGAAACGGTACATTATGTCTAAATGGTTAAACGATTTCCTCTACT
TTCGATTTCCCTCATCATCCACTTCACATTACCAATGTTATGTACATACG
CTGTCATGATCTGAAGCTGTCGTTTTAACTTCAATTCACGGTGCACCCCG
GCCGCTACCGTAATTGTTGCCATCACTTTCTATTAGGCACTGTGCTTCCT
CGATATTGCGCGTTCTCGGTCGGTCTGGTGCGTG back to topprotein sequence of jgi.p|Nanoce1779_2|584504 >mRNA_3083-protein ID=mRNA_3083-protein|Name=jgi.p|Nanoce1779_2|584504|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MRRGRLLLLACITTALVSLSVTNAFVLKPLGSSTNYRSSFCFPTKPHRSN
GASSSLLPQHLTVGGEDPSGLDLQSVWNTATGVGALVVGALVLADIVDTW
PRGSVNTKLVEAAQSTLGPQAGRGLFALENIPKDTTIGKFPGVISRRKNW
VSTKDSEEAAVRASRYTWTLANTDILDPTLSNGQLPEELLFYGGLLRKST
LLALVNEPRAGYDLNVVAVVSDRDVAYVAERNIYKGEELMTDYGPMYNRR
HYRQ* back to topmRNA from alignment at scaffold_7:622600..623962+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3083 ID=mRNA_3083|Name=jgi.p|Nanoce1779_2|584504|organism=Nannochloropsis oceanica|type=mRNA|length=1363bp|location=Sequence derived from alignment at scaffold_7:622600..623962+ (Nannochloropsis oceanica)
GTCAACGACGTGATGGTAAGAAAACCTTCGTTTCTGGCACTGCCTGGCTG
TCACGTCGGCTGCCTTCTCGACAAAGTCGGTGAAGAAACTGTTTTTGTCA
CAAGAAGCACTTTTAACGAGATTTTTGGGCGGGGCAGGAGAAGCACGCGT
GACATCCCCACCCCTCCCAGTCGCCCAACATATACACAGCACATTACTCA
GTCATGCGTCGTGGGCGGCTCCTGCTGCTAGCCTGCATTACGACCGCCCT
GGTCTCGTTGTCAGTGACGAATGCTTTTGTCCTGAAACCACTTGGCTCGA
GCACCAATTATCGGTCCAGTTTCTGCTTCCCCACCAAGCCTCATCGGTCT
AACGGTGCGTCATCGTCGTTGCTACCTCAGCACCTGACGGTGGGCGGTGA
GGACCCAAGTGGTCTCGATTTACAAAGCGTGTGGAATACTGCCACTGGTG
TCGGCGCACTCGTGGTGGGTGCATTGGTACTAGCGGATATTGTTGACACC
TGGCCCCGAGGTTCGGTTAACACGAAGCTAGTGGAGGCCGCACAATCCAC
TTTAGGTCCTCAAGCAGGGCGAGGACTCTTTGCTCTCGAAAACATTCCCA
AGGACACAACCATTGGTAAATTTCCTGGTGTCATCTCGCGACGCAAAAAC
TGGGTTTCAACAAAGGATAGTGAAGAGGCAGCTGTCCGGGCAAGCAGATA
CACATGGACGCTTGCCAACACGGATATTCTCGACCCCACGCTGAGTAATG
GACAGTTGCCCGAGGAGCTACTCTTCTATGGAGGCCTGCTGCGTAAGTCT
ACGCTTCTCGCCTTGGTTAACGAGCCCCGCGCGGGGTATGACTTGAATGT
TGTCGCTGTTGTGAGCGATCGAGATGTGGCGTACGTTGCAGAACGAAACA
TTTATAAAGGTGCGTCAAGATACCTTCTCTATCTGGTATCATAGTATCGT
GTTATAAAGGCAGGTAATCTTTCGCGCTTTCATAAGCAGTGTGAGTAATT
CTCATACCCTTCCTCCTCTCCCATCCTTATCCCTCCAGGTGAAGAGCTAA
TGACTGACTACGGCCCCATGTACAACAGACGGCACTACCGCCAGTAAAGC
TCGCCATAAAATGATTAATAAAATATGTCGATTTGGAAACGGTACATTAT
GTCTAAATGGTTAAACGATTTCCTCTACTTTCGATTTCCCTCATCATCCA
CTTCACATTACCAATGTTATGTACATACGCTGTCATGATCTGAAGCTGTC
GTTTTAACTTCAATTCACGGTGCACCCCGGCCGCTACCGTAATTGTTGCC
ATCACTTTCTATTAGGCACTGTGCTTCCTCGATATTGCGCGTTCTCGGTC
GGTCTGGTGCGTG back to topCoding sequence (CDS) from alignment at scaffold_7:622600..623962+ >mRNA_3083 ID=mRNA_3083|Name=jgi.p|Nanoce1779_2|584504|organism=Nannochloropsis oceanica|type=CDS|length=1530bp|location=Sequence derived from alignment at scaffold_7:622600..623962+ (Nannochloropsis oceanica)
ATGCGTCGTGGGCGGCTCCTGCTGCTAGCCTGCATTACGACCGCCCTGGT
CTCGTTGTCAGTGACGAATGCTTTTGTCCTGAAACCACTTGGCTCGAGCA
CCAATTATCGGTCCAGTTTCTGCTTCCCCACCAAGCCTCATCGGTCTAAC
GGTGCGTCATCGTCGTTGCTACCTCAGCACCTGACGGTGGGCGGTGAGGA
CCCAAGTGGTCTCGATTTACAAAGCGTGTGGAATACTGCCACTGGTGTCG
GCGCACTCGTGGTGGGTGCATTGGTACTAGCGGATATTGTTGACACCTGG
CCCCGAGGTTCGGTTAACACGAAGCTAGTGGAGGCCGCACAATCCACTTT
AGGTCCTCAAGCAGGGCGAGGACTCTTTGCTCTCGAAAACATTCCCAAGG
ACACAACCATTGGTAAATTTCCTGGTGTCATCTCGCGACGCAAAAACTGG
GTTTCAACAAAGGATAGTGAAGAGGCAGCTGTCCGGGCAAGCAGATACAC
ATGGACGCTTGCCAACACGGATATTCTCGACCCCACGCTGAGTAATGGAC
AGTTGCCCGAGGAGCTACTCTTCTATGGAGGCCTGCTGCGTAAGTCTACG
CTTCTCGCCTTGGTTAACGAGCCCCGCGCGGGGTATGACTTGAATGTTGT
CGCTGTTGTGAGCGATCGAGATGTGGCGTACGTTGCAGAACGAAACATTT
ATAAAGGTGAAGAGCTAATGACTGACTACGGCCCCATGTACAACAGACGG
CACTACCGCCAGTAAATGCGTCGTGGGCGGCTCCTGCTGCTAGCCTGCAT
TACGACCGCCCTGGTCTCGTTGTCAGTGACGAATGCTTTTGTCCTGAAAC
CACTTGGCTCGAGCACCAATTATCGGTCCAGTTTCTGCTTCCCCACCAAG
CCTCATCGGTCTAACGGTGCGTCATCGTCGTTGCTACCTCAGCACCTGAC
GGTGGGCGGTGAGGACCCAAGTGGTCTCGATTTACAAAGCGTGTGGAATA
CTGCCACTGGTGTCGGCGCACTCGTGGTGGGTGCATTGGTACTAGCGGAT
ATTGTTGACACCTGGCCCCGAGGTTCGGTTAACACGAAGCTAGTGGAGGC
CGCACAATCCACTTTAGGTCCTCAAGCAGGGCGAGGACTCTTTGCTCTCG
AAAACATTCCCAAGGACACAACCATTGGTAAATTTCCTGGTGTCATCTCG
CGACGCAAAAACTGGGTTTCAACAAAGGATAGTGAAGAGGCAGCTGTCCG
GGCAAGCAGATACACATGGACGCTTGCCAACACGGATATTCTCGACCCCA
CGCTGAGTAATGGACAGTTGCCCGAGGAGCTACTCTTCTATGGAGGCCTG
CTGCGTAAGTCTACGCTTCTCGCCTTGGTTAACGAGCCCCGCGCGGGGTA
TGACTTGAATGTTGTCGCTGTTGTGAGCGATCGAGATGTGGCGTACGTTG
CAGAACGAAACATTTATAAAGGTGAAGAGCTAATGACTGACTACGGCCCC
ATGTACAACAGACGGCACTACCGCCAGTAA back to top
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