jgi.p|Nanoce1779_2|584485, mRNA_3078 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|584485
Unique Name	mRNA_3078
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4991
Alignment location	scaffold_7:609856..615240 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	584571
Track	FilteredModels2
ProteinId	584485

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:609856..615240 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584485	gene_3078	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584485	mRNA_3078-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3078	CDS_3078	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_7:609856..615240-
coding sequence from alignment at scaffold_7:609856..615240-

mRNA sequence

>mRNA_3078 ID=mRNA_3078|Name=jgi.p|Nanoce1779_2|584485|organism=Nannochloropsis oceanica|type=mRNA|length=4991bp
ACAGGGACTTACGCTCAAACTACATTCCTGCTCCCCCACAGCGACAACCG
GTGCATCAGGACGCCATGAACGAGAATGGCAAAGGCGACACAATGCAGTC
GCCCTTGCGTCTACGTGGCCTTCCCGTGGCGTTAGACACCAGCAAGGAAA
CCAAAAAGAAAGGCTTTGGTTTTTTGGTTGCGGTTGCCTTCACCGTAAAC
TACATCATGGGCACGGGATTTCTCACCTTACCGTTTGCTACAGCCCAAGC
TGGTTCTGTCCTCGCCCTCGTGGCGCTTTTTTCCATGGCGGCCTTAAGCA
ACATCGCGAAGGATTACGTGCTCGAGAGCAGTGCCAGGGCAGAGCTGATA
GAAAACCCCCACTGCTTCTCCACGGACGGCCGCGCCGGTGGAGAGGTGAC
ACCTGCGCTTGTCCGGCAAATTCACTCTTCCCAGGATCTCCCCTTGCTTT
TGACGGTCAAAAAACGCAAGTACGAGATGCCAACGCTTTGCCAGCTCTTC
TTGGGACACTATGGCAAGGTTTTTTACATGCTCTGTCTTTCCGTTTATAT
CTACGGGGCATTGCTTGCGTACGGCACCGTGTTTGCCAATTCCGTTGCAG
CCATGTTTCCCCTTCCGGCCCCGCACGCCGAAGTCTCTTACGTACTTTAC
TTGGGCCTCTTCGCCGTTCTTGTCATCCCACTTTCTTGCCTGGAACTGAC
CGAGCAAATATCAGTACAGGTCGCGTTGGCCTTTTGCCGTGTGCTCATGG
TGGTGTGCATGGTGGGCTCCGTGGCCGCCGCTCTTGTCAGCGGCGAGGCT
GATTATTTCCCCAGCCTTACTGGTGAGGGTGGGGCTGTTGGGATACCGCT
GTGGAATTGGAAGGGACTACCCGTTTTCTTGCCAATTGCGTGTTATTCGT
TTATCTATCATCACTCTATTGCAGGGTTGAGTCATCCTGTGCGGGACAAG
ACCTTGCTAGGCCAAATCTTCTTAGCCACCTTTGTAATTTGTAGTTTATC
GTATGGACTGATTGCTGTCTTTGTGGCGCATTATTTCGGGCCGGAGATGG
CACAGTCGTCAAATTTGGAATGGGATGGGTACGGACGCACGGCTTTTGGC
AAGGCAGTTGGGACATACGTGCTGCTGTTTCCGGCTTTGGACGTGGCAAG
TACGTGGTAGCTCGGAGTGGGTAGAACATAAAGAGGGTGAGGAGAAAGAA
AAGGAGAGCATGAGTTGTTTGTCCAAAGCATCACACTTCTTAGGGCATGG
TCGAAAACAACAGCAGTATGAGTTGTTTGTCCAAAGCATCACACTTCTTA
GGGCATGGTGGAAAACAACAGCATACCGGATATTTACTCCTTGTAACCTT
TTCTCATTCTCTTCTTCACCCCCATGAGTAGGTGCCTTTCCCCTGAACGC
CATCACGTTGGGCAACAACATGCTCGATATGGGAAACACCCAACAAAACG
ATATCGATTGTCAAAGCGCAGGTCCACCTCTAAGAGTGAAGACGGTGGGA
TTCCGCCTCTTGGCCGCGGTGCCACCTCTGGTGGTGGCCGTCTTCGTGCG
TGACCTCGGCCGTATTTCCGAATATGCTGGGACTGTGGGGATAGTCATAA
CCCTTGTCTTTCCCGCTCTCCTCAACCTCCGCTCTCGCACGCTGATGAAG
GAGGTCTTCCAACTGGATTCGGCACGGACTTACTATTCAAATGAATTGTC
AAGAAAGCGATATGGGCCCGTGAATTTGATCATTGGCCTGGGCTTGTTCT
TTTACATTCTTGTCAATTTGCTGATGGAGTGAAAGCGTTCGCGTTAAAAG
AGCCTTTTGCGCACCGTGTGATATTTGTGTACAGATGACATATGGAATGA
GAGCACGCCCCCGCTGCCACCATTAGCACGCCGATGGCCGTTGCCTGATC
TGCAAAACTTACTGTCTGTTAGATCAAAGCAGTAATACAAAAATGCGATG
CGTAATGTCTAAATGCTTGATTCGATTCTCCATGGTGAGGCTCGTTATTT
CTTTGTCTCAATGCTGGCTAAATTTGTTCTCCCCTTTTCCCCCCATCACA
CATACAGATAAATGATAACACGGGTAACCACATCATGGGGGCGACATGCC
GCTTCTTTTCCACCAAAGGCGGCATTCACGGCAGCGACCGCAGGGGGAAA
AGGAAGAGACAGCACCAAAAGCGAAGCACGAGAACACAAGAAAGAAGCAT
TGGCCTTGGTGGGCTGCGGCAAGATGGGTATGGCAATGGGGCGTAACCTC
ATGAGAGCAGGCTATCCGTTGTTTGTGCACGACAAGCACAATGCCGAGGC
CACGGCAAAGTTAGTGGCGGAGGGAGCGACGGCAGTCACGGATGCACGAG
AGCTAGGGACACAAGCCCGCACTATCGTTACCATGCTGCCGAACGACGAA
GTTTTGCACACTGTTTCACAGGAGTTTCTTCCGTCTCTTCTTCCTGGTGC
ACTTCATATTGGATGCTCCACCGTCTCACCCTTTACATCGCGTACGCTTG
CCTTAACTCACACGGCCCGCGGCGTCAGTTTTGTGGGTGCCCCTGTTTTT
GCTCGTCCCGACGGGTTTGAAAAGAGACAGGCATATTTTGTCGTGGGCGG
CACGGACTCACGCGCTATTGAGGAGGCACGACCCATCTTGCTTTCCACGG
GCTCGCAAGTTTTTGAGTTTGGGAATGAAGATGCAGGTGCGGGGTCTGTC
GTTAAATTGTGTGGGAACTTCCTCATTGCGAGTGCCATCGAAAGCATTGG
GGAAGCCCTTGCACTGGCCGAGAACCAAGGCCTTGATCGGGTGAAGGTGA
TGAAGATGTTCAGCGCCACCATTTTCGATTGCCTGATTTACGAAGGCTAC
GGTGATCGGGTATCGCGGCGGGACCATCGACCTGGAGGGTTTGCGCTTGA
ACAGGGACATAAGGACGTTTCGTTGATATTGGATACGGCCCGGCGAAGCA
AGGTGCCCATGCCTTTCGCGTCGCTGTTGCAGGACCGTTTTACAAGCGCG
TTGAACCAGCCATGCTTGGGGGGACTAGATTGGAGTGCCATTGGCATTGA
CATAAGCAAGAATGCAGGCGAAAACCTGGTGGTAGAAGCAGCTGGACTCA
AAACACAAACCAACAATCAAGCTAGAGATAAGAGCAAGCTGGCAAAAAAT
AAGAGTCAGACAAAGAATTACTAAACAGAAAGCGACCTTCATACCACCCG
GAGAAGTCGAGGTCTAGTTATTCGCTGTGGAATGGGGGGATGTCACCGCT
CTGGGCATAGCTCCATGGTGGAGGAAGATATTATACCTCTCCGAGGCTGA
GGATGGATGGAATCAGCTCCACGGTGGACTAAGTAAGGAGGGCAGCTCAT
GTTTGAGGGAAGAAGGGCACTTGAAGAAGTGTAAGCGATGGTTGTTCAGA
AGTTCTTCATCCCGTCGCTCGCCGAGCACACAACCCATTACGTGGGTCAA
TATGATGCCTTGATATGTCTCTGTTGACCACTCGCTAACACACACACTTA
AGCAATCGCAGGCTTGTTACACGAGTCATGGCATACGGCTCGTGGCCGAT
AAAAAATAACGGACCTCACCCATACAACAAGGTAACAAGTGGCAAACCAA
GACAGCGACGGGTTTGGCCTGCGGTGGTGTTGCTTGCTTTCGTGCTCTAT
GGCGCTTTCGTCTACACCCGCGACAGCGCCGGTCACGCTGCTATAGATGC
GCGGGGCCAGCGACAATCTCTAAATCTCCAGCCCAAGGCCGGCGGTATGT
GGCAGCCCACACCAGGCAGCATCGATGGCGTCGTGGTCCTTGGCATGCAC
CGCTCCGGAACTTCCATGGTGACGGGTTTGCTGCAGGAAATGGGTTTCCA
TTTGGGAGAGCCTGACGATATTCTGGGAGCGAGGGAGGGGGAAAACGACA
AGGGCTTCTTCGAGCGGCTCCAAGTTGTCGTGCAGAACGATAAGCTGATG
AAGGAACAAGATGTTAACTGGTCTCTCAACATATTTAACTTCAACCACCT
CCTGGCTTTGGTAGGTGAAAGCATTCCATGTGTCAAAACGAAATCTGCGA
TTCGTATTATCTCTTTCCCCTTCAGCAGCTCAAATTAAGACACGTTTCAT
CCCCTTCCTGTTAAGGTCACAACAAAATTTATACCCATTTGTCACGGTAC
CGCGTTTCCGCCCACCGCTCTTTTTTCATGCAATACATACATGTCCCTTG
CAACCTACTAAAACCCCTTTTCCTTTTCATGCAGGAACACGCTCTAACGA
GCAAGGTAGACTTCGGACTTGGACGCGCTGCTTTGACCTTTTTCAACAAC
CCTGTACATCATCCATGGGCCGTCAAAGACCCGAGGCTTTGCTTCACTTT
GAAATTTTGGCTGCCCTTCTGGAGGACGCCCCCTGCCGTGCTCTTCGTAT
ACCGGCACCCAATGGAAGTGGCCAAATCCTTGATTCATCGTGGGAACGAG
TTTGGGCTGCCCCGCGCACTATATCTCTGGATAGCGTACAACCGCCTGGC
GATTCAAAACTCTCAAGGACTTTGCCGCGTTGTCATTTCGAATGCGGCGC
TCATCCAGGACGGGGCGGGCGTGCTAGGCATGGTCTACGAGCAGCTCCGG
GGCTGTGGTGTCGATGTTCCCCGGAAGATCACCATGAAAGACATCAACAG
CTTCATTGACCATAGCCTGCACCATCAGACGCAGAATCACGCAAAGGAGT
GCCAGCCCACGATCCGAAAGTCATGGAAGAGCGAGGCTGCCGGTGATCAT
GAAAAGGCGCGACAGAATGATGCGTATGCGCATGCTCTGAGGGTGTACTG
CGCCATGGAGAATGGCTCGGCCTTTTCTCCTTCATTTGAGTGGGAGGACC
TTGGAGACACAGCACCATCGTAATTTTCATATAGGCATGGAAGACGAACT
TCAGACAAAATCAAAAGTAGATGAGAAAGAATCGATGCATATAGTGTATT
AAGTAAAAAATAGAAAATAGAAAAGGGAAAAATTTGATTCA

protein sequence of jgi.p|Nanoce1779_2|584485

>mRNA_3078-protein ID=mRNA_3078-protein|Name=jgi.p|Nanoce1779_2|584485|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MITRVTTSWGRHAASFPPKAAFTAATAGGKGRDSTKSEAREHKKEALALV
GCGKMGMAMGRNLMRAGYPLFVHDKHNAEATAKLVAEGATAVTDARELGT
QARTIVTMLPNDEVLHTVSQEFLPSLLPGALHIGCSTVSPFTSRTLALTH
TARGVSFVGAPVFARPDGFEKRQAYFVVGGTDSRAIEEARPILLSTGSQV
FEFGNEDAGAGSVVKLCGNFLIASAIESIGEALALAENQGLDRVKVMKMF
SATIFDCLIYEGYGDRVSRRDHRPGGFALEQGHKDVSLILDTARRSKVPM
PFASLLQDRFTSALNQPCLGGLDWSAIGIDISKNAGENLVVEAAGLKTQT
NNQARDKSKLAKNKSQTKNY*

mRNA from alignment at scaffold_7:609856..615240-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3078 ID=mRNA_3078|Name=jgi.p|Nanoce1779_2|584485|organism=Nannochloropsis oceanica|type=mRNA|length=5385bp|location=Sequence derived from alignment at scaffold_7:609856..615240- (Nannochloropsis oceanica)
ACAGGGACTTACGCTCAAACTACATTCCTGCTCCCCCACAGCGACAACCG
GTGCATCAGGACGCCATGAACGAGAATGGCAAAGGCGACACAATGCAGTC
GCCCTTGCGTCTACGTGGCCTTCCCGTGGCGTTAGACACCAGCAAGGAAA
CCAAAAAGAAAGGCTTTGGTTTTTTGGTTGCGGTTGCCTTCACCGTAAAC
TACATCATGGGCACGGGATTTCTCACCTTACCGTTTGCTACAGCCCAAGC
TGGTTCTGTCCTCGCCCTCGTGGCGCTTTTTTCCATGGCGGCCTTAAGCA
ACATCGCGAAGGATTACGTGCTCGAGAGCAGTGCCAGGGCAGAGCTGATA
GAAAACCCCCACTGCTTCTCCACGGACGGCCGCGCCGGTGGAGAGGTGAC
ACCTGCGCTTGTCCGGCAAATTCACTCTTCCCAGGATCTCCCCTTGCTTT
TGACGGTCAAAAAACGCAAGTACGAGATGCCAACGCTTTGCCAGCTCTTC
TTGGGACACTATGGCAAGGTTTTTTACATGCTCTGTCTTTCCGTTTATAT
CTACGGGGCATTGCTTGCGTACGGCACCGTGTTTGCCAATTCCGTTGCAG
CCATGTTTCCCCTTCCGGCCCCGCACGCCGAAGTCTCTTACGTACTTTAC
TTGGGCCTCTTCGCCGTTCTTGTCATCCCACTTTCTTGCCTGGAACTGAC
CGAGCAAATATCAGTACAGGTCGCGTTGGCCTTTTGCCGTGTGCTCATGG
TGGTGTGCATGGTGGGCTCCGTGGCCGCCGCTCTTGTCAGCGGCGAGGCT
GATTATTTCCCCAGCCTTACTGGTGAGGGTGGGGCTGTTGGGATACCGCT
GTGGAATTGGAAGGGACTACCCGTTTTCTTGCCAATTGCGTGTTATTCGT
TTATCTATCATCACTCTATTGCAGGGTTGAGTCATCCTGTGCGGGACAAG
ACCTTGCTAGGCCAAATCTTCTTAGCCACCTTTGTAATTTGTAGTTTATC
GTATGGACTGATTGCTGTCTTTGTGGCGCATTATTTCGGGCCGGAGATGG
CACAGTCGTCAAATTTGGAATGGGATGGGTACGGACGCACGGCTTTTGGC
AAGGCAGTTGGGACATACGTGCTGCTGTTTCCGGCTTTGGACGTGGCAAG
TACGTGGTAGCTCGGAGTGGGTAGAACATAAAGAGGGTGAGGAGAAAGAA
AAGGAGAGCATGAGTTGTTTGTCCAAAGCATCACACTTCTTAGGGCATGG
TCGAAAACAACAGCAGTATGAGTTGTTTGTCCAAAGCATCACACTTCTTA
GGGCATGGTGGAAAACAACAGCATACCGGATATTTACTCCTTGTAACCTT
TTCTCATTCTCTTCTTCACCCCCATGAGTAGGTGCCTTTCCCCTGAACGC
CATCACGTTGGGCAACAACATGCTCGATATGGGAAACACCCAACAAAACG
ATATCGATTGTCAAAGCGCAGGTCCACCTCTAAGAGTGAAGACGGTGGGA
TTCCGCCTCTTGGCCGCGGTGCCACCTCTGGTGGTGGCCGTCTTCGTGCG
TGACCTCGGCCGTATTTCCGAATATGCTGGGACTGTGGGGATAGTCATAA
CCCTTGTCTTTCCCGCTCTCCTCAACCTCCGCTCTCGCACGCTGATGAAG
GAGGTCTTCCAACTGGATTCGGCACGGACTTACTATTCAAATGAATTGTC
AAGAAAGCGATATGGGCCCGTGAATTTGATCATTGGCCTGGGCTTGTTCT
TTTACATTCTTGTCAATTTGCTGATGGAGTGAAAGCGTTCGCGTTAAAAG
AGCCTTTTGCGCACCGTGTGATATTTGTGTACAGATGACATATGGAATGA
GAGCACGCCCCCGCTGCCACCATTAGCACGCCGATGGCCGTTGCCTGATC
TGCAAAACTTACTGTCTGTTAGATCAAAGCAGTAATACAAAAATGCGATG
CGTAATGTCTAAATGCTTGATTCGATTCTCCATGGTGAGGCTCGTTATTT
CTTTGTCTCAATGCTGGCTAAATTTGTTCTCCCCTTTTCCCCCCATCACA
CATACAGATAAATGATAACACGGGTAACCACATCATGGGGGCGACATGCC
GCTTCTTTTCCACCAAAGGCGGCATTCACGGCAGCGACCGCAGGGGGAAA
AGGAAGAGACAGCACCAAAAGCGAAGCACGAGAACACAAGAAAGAAGCAT
TGGCCTTGGTGGGCTGCGGCAAGATGGGTATGGCAATGGGGCGTAACCTC
ATGAGAGCAGGCTATCCGTTGTTTGTGCACGACAAGCACAATGCCGAGGC
CACGGCAAAGTTAGTGGCGGAGGTAAGAGGATATAGATATTCATGTGGGT
AAGAGGACGAAAAGAAGAGTGTATACAAAATCGCTGGCACTAATCACCCG
TAGAGACGAATCTTTTCATCGACATGATATCACCCACCCTTCAATCGATA
GGGAGCGACGGCAGTCACGGATGCACGAGAGCTAGGGACACAAGCCCGCA
CTATCGTTACCATGCTGCCGAACGACGAAGTTTTGCACACGTAAGACAAC
CCACGAAGCTTCTTCTCCCACCCCGTCTCATCCCGACTTTTCATAAAGTT
ACCTTTTCCAACTCCTCGCAAGTGTTTCACAGGAGTTTCTTCCGTCTCTT
CTTCCTGGTGCACTTCATATTGGATGCTCCACCGTCTCACCCTTTACATC
GCGTACGCTTGCCTTAACTCACACGGCCCGCGGCGTCAGTTTTGTGGGTG
CCCCTGTTTTTGCTCGTCCCGACGGGTTTGAAAAGAGACAGGCATATTTT
GTCGTGGGCGGCACGGACTCACGCGCTATTGAGGAGGCACGACCCATCTT
GCTTTCCACGGGCTCGCAAGTTTTTGAGTTTGGGAATGAAGATGCAGGTG
CGGGGTCTGTCGTTAAATTGTGTGGGAACTTCCTCATTGCGAGTGCCATC
GAAAGCATTGGGGAAGCCCTTGCACTGGCCGAGAACCAAGGCCTTGATCG
GGTGAAGGTGATGAAGATGTTCAGCGCCACCATTTTCGATTGCCTGATTT
ACGAAGGGTAAGCTTGGGAATTTTGGCGAAGAATACAGGGATAATTTGCC
AAACATAACCATGTTACTGCTTCCAACATCCCACACCCTCATACATAGCT
ACGGTGATCGGGTATCGCGGCGGGACCATCGACCTGGAGGGTTTGCGCTT
GAACAGGGACATAAGGACGTTTCGTTGATATTGGATACGGCCCGGCGAAG
CAAGGTGCCCATGCCTTTCGCGTCGCTGTTGCAGGACCGTTTTACAAGCG
CGTTGAACCAGCCATGCTTGGGGGGACTAGATTGGAGTGCCATTGGCATT
GACATAAGCAAGAATGCAGGCGAAAACCTGGTGGTAGAAGCAGCTGGACT
CAAAACACAAACCAACAATCAAGCTAGAGATAAGAGCAAGCTGGCAAAAA
ATAAGAGTCAGACAAAGAATTACTAAACAGAAAGCGACCTTCATACCACC
CGGAGAAGTCGAGGTCTAGTTATTCGCTGTGGAATGGGGGGATGTCACCG
CTCTGGGCATAGCTCCATGGTGGAGGAAGATATTATACCTCTCCGAGGCT
GAGGATGGATGGAATCAGCTCCACGGTGGACTAAGTAAGGAGGGCAGCTC
ATGTTTGAGGGAAGAAGGGCACTTGAAGAAGTGTAAGCGATGGTTGTTCA
GAAGTTCTTCATCCCGTCGCTCGCCGAGCACACAACCCATTACGTGGGTC
AATATGATGCCTTGATATGTCTCTGTTGACCACTCGCTAACACACACACT
TAAGCAATCGCAGGCTTGTTACACGAGTCATGGCATACGGCTCGTGGCCG
ATAAAAAATAACGGACCTCACCCATACAACAAGGTAACAAGTGGCAAACC
AAGGTAAGTTTTCAGCACCCTTTGACCCACCATTCTCTGATCTTTGCGGA
GGCCCGCTCAGTCTCCATTATACTTCCTACTATTGACCAAACCAGACAGC
GACGGGTTTGGCCTGCGGTGGTGTTGCTTGCTTTCGTGCTCTATGGCGCT
TTCGTCTACACCCGCGACAGCGCCGGTCACGCTGCTATAGATGCGCGGGG
CCAGCGACAATCTCTAAATCTCCAGCCCAAGGCCGGCGGTATGTGGCAGC
CCACACCAGGCAGCATCGATGGCGTCGTGGTCCTTGGCATGCACCGCTCC
GGAACTTCCATGGTGACGGGTTTGCTGCAGGAAATGGGTTTCCATTTGGG
AGAGCCTGACGATATTCTGGGAGCGAGGGAGGGGGAAAACGACAAGGGCT
TCTTCGAGCGGCTCCAAGTTGTCGTGCAGAACGATAAGCTGATGAAGGAA
CAAGATGTTAACTGGTCTCTCAACATATTTAACTTCAACCACCTCCTGGC
TTTGGTAGGTGAAAGCATTCCATGTGTCAAAACGAAATCTGCGATTCGTA
TTATCTCTTTCCCCTTCAGCAGCTCAAATTAAGACACGTTTCATCCCCTT
CCTGTTAAGGTCACAACAAAATTTATACCCATTTGTCACGGTACCGCGTT
TCCGCCCACCGCTCTTTTTTCATGCAATACATACATGTCCCTTGCAACCT
ACTAAAACCCCTTTTCCTTTTCATGCAGGAACACGCTCTAACGAGCAAGG
TAGACTTCGGACTTGGACGCGCTGCTTTGACCTTTTTCAACAACCCTGTA
CATCATCCATGGGCCGTCAAAGACCCGAGGCTTTGCTTCACTTTGAAATT
TTGGCTGCCCTTCTGGAGGACGCCCCCTGCCGTGCTCTTCGTATACCGGC
ACCCAATGGAAGTGGCCAAATCCTTGATTCATCGTGGGAACGAGTTTGGG
CTGCCCCGCGCACTATATCTCTGGATAGCGTACAACCGCCTGGCGATTCA
AAACTCTCAAGGACTTTGCCGCGTTGTCATTTCGAATGCGGCGCTCATCC
AGGACGGGGCGGGCGTGCTAGGCATGGTCTACGAGCAGCTCCGGGGCTGT
GGTGTCGATGTTCCCCGGAAGATCACCATGAAAGACATCAACAGCTTCAT
TGACCATAGCCTGCACCATCAGACGCAGAATCACGCAAAGGAGTGCCAGC
CCACGATCCGAAAGTCATGGAAGAGCGAGGCTGCCGGTGATCATGAAAAG
GCGCGACAGAATGATGCGTATGCGCATGCTCTGAGGGTGTACTGCGCCAT
GGAGAATGGCTCGGCCTTTTCTCCTTCATTTGAGTGGGAGGACCTTGGAG
ACACAGCACCATCGTAATTTTCATATAGGCATGGAAGACGAACTTCAGAC
AAAATCAAAAGTAGATGAGAAAGAATCGATGCATATAGTGTATTAAGTAA
AAAATAGAAAATAGAAAAGGGAAAAATTTGATTCA

Coding sequence (CDS) from alignment at scaffold_7:609856..615240-

>mRNA_3078 ID=mRNA_3078|Name=jgi.p|Nanoce1779_2|584485|organism=Nannochloropsis oceanica|type=CDS|length=4452bp|location=Sequence derived from alignment at scaffold_7:609856..615240- (Nannochloropsis oceanica)
CTACGGTGATCGGGTATCGCGGCGGGACCATCGACCTGGAGGGTTTGCGC
TTGAACAGGGACATAAGGACGTTTCGTTGATATTGGATACGGCCCGGCGA
AGCAAGGTGCCCATGCCTTTCGCGTCGCTGTTGCAGGACCGTTTTACAAG
CGCGTTGAACCAGCCATGCTTGGGGGGACTAGATTGGAGTGCCATTGGCA
TTGACATAAGCAAGAATGCAGGCGAAAACCTGGTGGTAGAAGCAGCTGGA
CTCAAAACACAAACCAACAATCAAGCTAGAGATAAGAGCAAGCTGGCAAA
AAATAAGAGTCAGACAAAGAATTACTAATGTTTCACAGGAGTTTCTTCCG
TCTCTTCTTCCTGGTGCACTTCATATTGGATGCTCCACCGTCTCACCCTT
TACATCGCGTACGCTTGCCTTAACTCACACGGCCCGCGGCGTCAGTTTTG
TGGGTGCCCCTGTTTTTGCTCGTCCCGACGGGTTTGAAAAGAGACAGGCA
TATTTTGTCGTGGGCGGCACGGACTCACGCGCTATTGAGGAGGCACGACC
CATCTTGCTTTCCACGGGCTCGCAAGTTTTTGAGTTTGGGAATGAAGATG
CAGGTGCGGGGTCTGTCGTTAAATTGTGTGGGAACTTCCTCATTGCGAGT
GCCATCGAAAGCATTGGGGAAGCCCTTGCACTGGCCGAGAACCAAGGCCT
TGATCGGGTGAAGGTGATGAAGATGTTCAGCGCCACCATTTTCGATTGCC
TGATTTACGAAGGGGAGCGACGGCAGTCACGGATGCACGAGAGCTAGGGA
CACAAGCCCGCACTATCGTTACCATGCTGCCGAACGACGAAGTTTTGCAC
ACATGATAACACGGGTAACCACATCATGGGGGCGACATGCCGCTTCTTTT
CCACCAAAGGCGGCATTCACGGCAGCGACCGCAGGGGGAAAAGGAAGAGA
CAGCACCAAAAGCGAAGCACGAGAACACAAGAAAGAAGCATTGGCCTTGG
TGGGCTGCGGCAAGATGGGTATGGCAATGGGGCGTAACCTCATGAGAGCA
GGCTATCCGTTGTTTGTGCACGACAAGCACAATGCCGAGGCCACGGCAAA
GTTAGTGGCGGAGCTACGGTGATCGGGTATCGCGGCGGGACCATCGACCT
GGAGGGTTTGCGCTTGAACAGGGACATAAGGACGTTTCGTTGATATTGGA
TACGGCCCGGCGAAGCAAGGTGCCCATGCCTTTCGCGTCGCTGTTGCAGG
ACCGTTTTACAAGCGCGTTGAACCAGCCATGCTTGGGGGGACTAGATTGG
AGTGCCATTGGCATTGACATAAGCAAGAATGCAGGCGAAAACCTGGTGGT
AGAAGCAGCTGGACTCAAAACACAAACCAACAATCAAGCTAGAGATAAGA
GCAAGCTGGCAAAAAATAAGAGTCAGACAAAGAATTACTAATGTTTCACA
GGAGTTTCTTCCGTCTCTTCTTCCTGGTGCACTTCATATTGGATGCTCCA
CCGTCTCACCCTTTACATCGCGTACGCTTGCCTTAACTCACACGGCCCGC
GGCGTCAGTTTTGTGGGTGCCCCTGTTTTTGCTCGTCCCGACGGGTTTGA
AAAGAGACAGGCATATTTTGTCGTGGGCGGCACGGACTCACGCGCTATTG
AGGAGGCACGACCCATCTTGCTTTCCACGGGCTCGCAAGTTTTTGAGTTT
GGGAATGAAGATGCAGGTGCGGGGTCTGTCGTTAAATTGTGTGGGAACTT
CCTCATTGCGAGTGCCATCGAAAGCATTGGGGAAGCCCTTGCACTGGCCG
AGAACCAAGGCCTTGATCGGGTGAAGGTGATGAAGATGTTCAGCGCCACC
ATTTTCGATTGCCTGATTTACGAAGGGGAGCGACGGCAGTCACGGATGCA
CGAGAGCTAGGGACACAAGCCCGCACTATCGTTACCATGCTGCCGAACGA
CGAAGTTTTGCACACATGATAACACGGGTAACCACATCATGGGGGCGACA
TGCCGCTTCTTTTCCACCAAAGGCGGCATTCACGGCAGCGACCGCAGGGG
GAAAAGGAAGAGACAGCACCAAAAGCGAAGCACGAGAACACAAGAAAGAA
GCATTGGCCTTGGTGGGCTGCGGCAAGATGGGTATGGCAATGGGGCGTAA
CCTCATGAGAGCAGGCTATCCGTTGTTTGTGCACGACAAGCACAATGCCG
AGGCCACGGCAAAGTTAGTGGCGGAGCTACGGTGATCGGGTATCGCGGCG
GGACCATCGACCTGGAGGGTTTGCGCTTGAACAGGGACATAAGGACGTTT
CGTTGATATTGGATACGGCCCGGCGAAGCAAGGTGCCCATGCCTTTCGCG
TCGCTGTTGCAGGACCGTTTTACAAGCGCGTTGAACCAGCCATGCTTGGG
GGGACTAGATTGGAGTGCCATTGGCATTGACATAAGCAAGAATGCAGGCG
AAAACCTGGTGGTAGAAGCAGCTGGACTCAAAACACAAACCAACAATCAA
GCTAGAGATAAGAGCAAGCTGGCAAAAAATAAGAGTCAGACAAAGAATTA
CTAATGTTTCACAGGAGTTTCTTCCGTCTCTTCTTCCTGGTGCACTTCAT
ATTGGATGCTCCACCGTCTCACCCTTTACATCGCGTACGCTTGCCTTAAC
TCACACGGCCCGCGGCGTCAGTTTTGTGGGTGCCCCTGTTTTTGCTCGTC
CCGACGGGTTTGAAAAGAGACAGGCATATTTTGTCGTGGGCGGCACGGAC
TCACGCGCTATTGAGGAGGCACGACCCATCTTGCTTTCCACGGGCTCGCA
AGTTTTTGAGTTTGGGAATGAAGATGCAGGTGCGGGGTCTGTCGTTAAAT
TGTGTGGGAACTTCCTCATTGCGAGTGCCATCGAAAGCATTGGGGAAGCC
CTTGCACTGGCCGAGAACCAAGGCCTTGATCGGGTGAAGGTGATGAAGAT
GTTCAGCGCCACCATTTTCGATTGCCTGATTTACGAAGGGGAGCGACGGC
AGTCACGGATGCACGAGAGCTAGGGACACAAGCCCGCACTATCGTTACCA
TGCTGCCGAACGACGAAGTTTTGCACACATGATAACACGGGTAACCACAT
CATGGGGGCGACATGCCGCTTCTTTTCCACCAAAGGCGGCATTCACGGCA
GCGACCGCAGGGGGAAAAGGAAGAGACAGCACCAAAAGCGAAGCACGAGA
ACACAAGAAAGAAGCATTGGCCTTGGTGGGCTGCGGCAAGATGGGTATGG
CAATGGGGCGTAACCTCATGAGAGCAGGCTATCCGTTGTTTGTGCACGAC
AAGCACAATGCCGAGGCCACGGCAAAGTTAGTGGCGGAGCTACGGTGATC
GGGTATCGCGGCGGGACCATCGACCTGGAGGGTTTGCGCTTGAACAGGGA
CATAAGGACGTTTCGTTGATATTGGATACGGCCCGGCGAAGCAAGGTGCC
CATGCCTTTCGCGTCGCTGTTGCAGGACCGTTTTACAAGCGCGTTGAACC
AGCCATGCTTGGGGGGACTAGATTGGAGTGCCATTGGCATTGACATAAGC
AAGAATGCAGGCGAAAACCTGGTGGTAGAAGCAGCTGGACTCAAAACACA
AACCAACAATCAAGCTAGAGATAAGAGCAAGCTGGCAAAAAATAAGAGTC
AGACAAAGAATTACTAATGTTTCACAGGAGTTTCTTCCGTCTCTTCTTCC
TGGTGCACTTCATATTGGATGCTCCACCGTCTCACCCTTTACATCGCGTA
CGCTTGCCTTAACTCACACGGCCCGCGGCGTCAGTTTTGTGGGTGCCCCT
GTTTTTGCTCGTCCCGACGGGTTTGAAAAGAGACAGGCATATTTTGTCGT
GGGCGGCACGGACTCACGCGCTATTGAGGAGGCACGACCCATCTTGCTTT
CCACGGGCTCGCAAGTTTTTGAGTTTGGGAATGAAGATGCAGGTGCGGGG
TCTGTCGTTAAATTGTGTGGGAACTTCCTCATTGCGAGTGCCATCGAAAG
CATTGGGGAAGCCCTTGCACTGGCCGAGAACCAAGGCCTTGATCGGGTGA
AGGTGATGAAGATGTTCAGCGCCACCATTTTCGATTGCCTGATTTACGAA
GGGGAGCGACGGCAGTCACGGATGCACGAGAGCTAGGGACACAAGCCCGC
ACTATCGTTACCATGCTGCCGAACGACGAAGTTTTGCACACATGATAACA
CGGGTAACCACATCATGGGGGCGACATGCCGCTTCTTTTCCACCAAAGGC
GGCATTCACGGCAGCGACCGCAGGGGGAAAAGGAAGAGACAGCACCAAAA
GCGAAGCACGAGAACACAAGAAAGAAGCATTGGCCTTGGTGGGCTGCGGC
AAGATGGGTATGGCAATGGGGCGTAACCTCATGAGAGCAGGCTATCCGTT
GTTTGTGCACGACAAGCACAATGCCGAGGCCACGGCAAAGTTAGTGGCGG
AG

Synonyms

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