jgi.p|Nanoce1779_2|584484, mRNA_3077 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|584484
Unique Name	mRNA_3077
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5069
Alignment location	scaffold_7:609856..615240 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	584570
Track	FilteredModels2
ProteinId	584484

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:609856..615240 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584484	gene_3077	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584484	mRNA_3077-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3077	CDS_3077	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_7:609856..615240-
coding sequence from alignment at scaffold_7:609856..615240-

mRNA sequence

>mRNA_3077 ID=mRNA_3077|Name=jgi.p|Nanoce1779_2|584484|organism=Nannochloropsis oceanica|type=mRNA|length=5069bp
ACAGGGACTTACGCTCAAACTACATTCCTGCTCCCCCACAGCGACAACCG
GTGCATCAGGACGCCATGAACGAGAATGGCAAAGGCGACACAATGCAGTC
GCCCTTGCGTCTACGTGGCCTTCCCGTGGCGTTAGACACCAGCAAGGAAA
CCAAAAAGAAAGGCTTTGGTTTTTTGGTTGCGGTTGCCTTCACCGTAAAC
TACATCATGGGCACGGGATTTCTCACCTTACCGTTTGCTACAGCCCAAGC
TGGTTCTGTCCTCGCCCTCGTGGCGCTTTTTTCCATGGCGGCCTTAAGCA
ACATCGCGAAGGATTACGTGCTCGAGAGCAGTGCCAGGGCAGAGCTGATA
GAAAACCCCCACTGCTTCTCCACGGACGGCCGCGCCGGTGGAGAGGTGAC
ACCTGCGCTTGTCCGGCAAATTCACTCTTCCCAGGATCTCCCCTTGCTTT
TGACGGTCAAAAAACGCAAGTACGAGATGCCAACGCTTTGCCAGCTCTTC
TTGGGACACTATGGCAAGGTTTTTTACATGCTCTGTCTTTCCGTTTATAT
CTACGGGGCATTGCTTGCGTACGGCACCGTGTTTGCCAATTCCGTTGCAG
CCATGTTTCCCCTTCCGGCCCCGCACGCCGAAGTCTCTTACGTACTTTAC
TTGGGCCTCTTCGCCGTTCTTGTCATCCCACTTTCTTGCCTGGAACTGAC
CGAGCAAATATCAGTACAGGTCGCGTTGGCCTTTTGCCGTGTGCTCATGG
TGGTGTGCATGGTGGGCTCCGTGGCCGCCGCTCTTGTCAGCGGCGAGGCT
GATTATTTCCCCAGCCTTACTGGTGAGGGTGGGGCTGTTGGGATACCGCT
GTGGAATTGGAAGGGACTACCCGTTTTCTTGCCAATTGCGTGTTATTCGT
TTATCTATCATCACTCTATTGCAGGGTTGAGTCATCCTGTGCGGGACAAG
ACCTTGCTAGGCCAAATCTTCTTAGCCACCTTTGTAATTTGTAGTTTATC
GTATGGACTGATTGCTGTCTTTGTGGCGCATTATTTCGGGCCGGAGATGG
CACAGTCGTCAAATTTGGAATGGGATGGGTACGGACGCACGGCTTTTGGC
AAGGCAGTTGGGACATACGTGCTGCTGTTTCCGGCTTTGGACGTGGCAAG
TACGTGGTAGCTCGGAGTGGGTAGAACATAAAGAGGGTGAGGAGAAAGAA
AAGGAGAGCATGAGTTGTTTGTCCAAAGCATCACACTTCTTAGGGCATGG
TCGAAAACAACAGCAGTATGAGTTGTTTGTCCAAAGCATCACACTTCTTA
GGGCATGGTGGAAAACAACAGCATACCGGATATTTACTCCTTGTAACCTT
TTCTCATTCTCTTCTTCACCCCCATGAGTAGGTGCCTTTCCCCTGAACGC
CATCACGTTGGGCAACAACATGCTCGATATGGGAAACACCCAACAAAACG
ATATCGATTGTCAAAGCGCAGGTCCACCTCTAAGAGTGAAGACGGTGGGA
TTCCGCCTCTTGGCCGCGGTGCCACCTCTGGTGGTGGCCGTCTTCGTGCG
TGACCTCGGCCGTATTTCCGAATATGCTGGGACTGTGGGGATAGTCATAA
CCCTTGTCTTTCCCGCTCTCCTCAACCTCCGCTCTCGCACGCTGATGAAG
GAGGTCTTCCAACTGGATTCGGCACGGACTTACTATTCAAATGAATTGTC
AAGAAAGCGATATGGGCCCGTGAATTTGATCATTGGCCTGGGCTTGTTCT
TTTACATTCTTGTCAATTTGCTGATGGAGTGAAAGCGTTCGCGTTAAAAG
AGCCTTTTGCGCACCGTGTGATATTTGTGTACAGATGACATATGGAATGA
GAGCACGCCCCCGCTGCCACCATTAGCACGCCGATGGCCGTTGCCTGATC
TGCAAAACTTACTGTCTGTTAGATCAAAGCAGTAATACAAAAATGCGATG
CGTAATGTCTAAATGCTTGATTCGATTCTCCATGGTGAGGCTCGTTATTT
CTTTGTCTCAATGCTGGCTAAATTTGTTCTCCCCTTTTCCCCCCATCACA
CATACAGATAAATGATAACACGGGTAACCACATCATGGGGGCGACATGCC
GCTTCTTTTCCACCAAAGGCGGCATTCACGGCAGCGACCGCAGGGGGAAA
AGGAAGAGACAGCACCAAAAGCGAAGCACGAGAACACAAGAAAGAAGCAT
TGGCCTTGGTGGGCTGCGGCAAGATGGGTATGGCAATGGGGCGTAACCTC
ATGAGAGCAGGCTATCCGTTGTTTGTGCACGACAAGCACAATGCCGAGGC
CACGGCAAAGTTAGTGGCGGAGGTAAGAGGATATAGATATTCATGTGGGT
AAGAGGACGAAAAGAAGAGTGTATACAAAATCGCTGGCACTAATCACCCG
TAGAGACGAATCTTTTCATCGACATGATATCACCCACCCTTCAATCGATA
GGGAGCGACGGCAGTCACGGATGCACGAGAGCTAGGGACACAAGCCCGCA
CTATCGTTACCATGCTGCCGAACGACGAAGTTTTGCACACGTAAGACAAC
CCACGAAGCTTCTTCTCCCACCCCGTCTCATCCCGACTTTTCATAAAGTT
ACCTTTTCCAACTCCTCGCAAGTGTTTCACAGGAGTTTCTTCCGTCTCTT
CTTCCTGGTGCACTTCATATTGGATGCTCCACCGTCTCACCCTTTACATC
GCGTACGCTTGCCTTAACTCACACGGCCCGCGGCGTCAGTTTTGTGGGTG
CCCCTGTTTTTGCTCGTCCCGACGGGTTTGAAAAGAGACAGGCATATTTT
GTCGTGGGCGGCACGGACTCACGCGCTATTGAGGAGGCACGACCCATCTT
GCTTTCCACGGGCTCGCAAGTTTTTGAGTTTGGGAATGAAGATGCAGGTG
CGGGGTCTGTCGTTAAATTGTGTGGGAACTTCCTCATTGCGAGTGCCATC
GAAAGCATTGGGGAAGCCCTTGCACTGGCCGAGAACCAAGGCCTTGATCG
GGTGAAGGTGATGAAGATGTTCAGCGCCACCATTTTCGATTGCCTGATTT
ACGAAGGGTAAGCTTGGGAATTTTGGCGAAGAATACAGGGATAATTTGCC
AAACATAACCATGTTACTGCTTCCAACATCCCACACCCTCATACATAGCT
ACGGTGATCGGGTATCGCGGCGGGACCATCGACCTGGAGGGTTTGCGCTT
GAACAGGGACATAAGGACGTTTCGTTGATATTGGATACGGCCCGGCGAAG
CAAGGTGCCCATGCCTTTCGCGTCGCTGTTGCAGGACCGTTTTACAAGCG
CGTTGAACCAGCCATGCTTGGGGGGACTAGATTGGAGTGCCATTGGCATT
GACATAAGCAAGAATGCAGGCGAAAACCTGGTGGTAGAAGCAGCTGGACT
CAAAACACAAACCAACAATCAAGCTAGAGATAAGAGCAAGCTGGCAAAAA
ATAAGAGTCAGACAAAGAATTACTAAACAGAAAGCGACCTTCATACCACC
CGGAGAAGTCGAGGTCTAGTTATTCGCTGTGGAATGGGGGGATGTCACCG
CTCTGGGCATAGCTCCATGGTGGAGGAAGATATTATACCTCTCCGAGGCT
GAGGATGGATGGAATCAGCTCCACGGTGGACTAAGTAAGGAGGGCAGCTC
ATGTTTGAGGGAAGAAGGGCACTTGAAGAAGTGTAAGCGATGGTTGTTCA
GAAGTTCTTCATCCCGTCGCTCGCCGAGCACACAACCCATTACGTGGGTC
AATATGATGCCTTGATATGTCTCTGTTGACCACTCGCTAACACACACACT
TAAGCAATCGCAGGCTTGTTACACGAGTCATGGCATACGGCTCGTGGCCG
ATAAAAAATAACGGACCTCACCCATACAACAAGGTAACAAGTGGCAAACC
AAGACAGCGACGGGTTTGGCCTGCGGTGGTGTTGCTTGCTTTCGTGCTCT
ATGGCGCTTTCGTCTACACCCGCGACAGCGCCGGTCACGCTGCTATAGAT
GCGCGGGGCCAGCGACAATCTCTAAATCTCCAGCCCAAGGCCGGCGGTAT
GTGGCAGCCCACACCAGGCAGCATCGATGGCGTCGTGGTCCTTGGCATGC
ACCGCTCCGGAACTTCCATGGTGACGGGTTTGCTGCAGGAAATGGGTTTC
CATTTGGGAGAGCCTGACGATATTCTGGGAGCGAGGGAGGGGGAAAACGA
CAAGGGCTTCTTCGAGCGGCTCCAAGTTGTCGTGCAGAACGATAAGCTGA
TGAAGGAACAAGATGTTAACTGGTCTCTCAACATATTTAACTTCAACCAC
CTCCTGGCTTTGGAACACGCTCTAACGAGCAAGGTAGACTTCGGACTTGG
ACGCGCTGCTTTGACCTTTTTCAACAACCCTGTACATCATCCATGGGCCG
TCAAAGACCCGAGGCTTTGCTTCACTTTGAAATTTTGGCTGCCCTTCTGG
AGGACGCCCCCTGCCGTGCTCTTCGTATACCGGCACCCAATGGAAGTGGC
CAAATCCTTGATTCATCGTGGGAACGAGTTTGGGCTGCCCCGCGCACTAT
ATCTCTGGATAGCGTACAACCGCCTGGCGATTCAAAACTCTCAAGGACTT
TGCCGCGTTGTCATTTCGAATGCGGCGCTCATCCAGGACGGGGCGGGCGT
GCTAGGCATGGTCTACGAGCAGCTCCGGGGCTGTGGTGTCGATGTTCCCC
GGAAGATCACCATGAAAGACATCAACAGCTTCATTGACCATAGCCTGCAC
CATCAGACGCAGAATCACGCAAAGGAGTGCCAGCCCACGATCCGAAAGTC
ATGGAAGAGCGAGGCTGCCGGTGATCATGAAAAGGCGCGACAGAATGATG
CGTATGCGCATGCTCTGAGGGTGTACTGCGCCATGGAGAATGGCTCGGCC
TTTTCTCCTTCATTTGAGTGGGAGGACCTTGGAGACACAGCACCATCGTA
ATTTTCATATAGGCATGGAAGACGAACTTCAGACAAAATCAAAAGTAGAT
GAGAAAGAATCGATGCATATAGTGTATTAAGTAAAAAATAGAAAATAGAA
AAGGGAAAAATTTGATTCA

protein sequence of jgi.p|Nanoce1779_2|584484

>mRNA_3077-protein ID=mRNA_3077-protein|Name=jgi.p|Nanoce1779_2|584484|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MAYGSWPIKNNGPHPYNKVTSGKPRQRRVWPAVVLLAFVLYGAFVYTRDS
AGHAAIDARGQRQSLNLQPKAGGMWQPTPGSIDGVVVLGMHRSGTSMVTG
LLQEMGFHLGEPDDILGAREGENDKGFFERLQVVVQNDKLMKEQDVNWSL
NIFNFNHLLALEHALTSKVDFGLGRAALTFFNNPVHHPWAVKDPRLCFTL
KFWLPFWRTPPAVLFVYRHPMEVAKSLIHRGNEFGLPRALYLWIAYNRLA
IQNSQGLCRVVISNAALIQDGAGVLGMVYEQLRGCGVDVPRKITMKDINS
FIDHSLHHQTQNHAKECQPTIRKSWKSEAAGDHEKARQNDAYAHALRVYC
AMENGSAFSPSFEWEDLGDTAPS*

mRNA from alignment at scaffold_7:609856..615240-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3077 ID=mRNA_3077|Name=jgi.p|Nanoce1779_2|584484|organism=Nannochloropsis oceanica|type=mRNA|length=5385bp|location=Sequence derived from alignment at scaffold_7:609856..615240- (Nannochloropsis oceanica)
ACAGGGACTTACGCTCAAACTACATTCCTGCTCCCCCACAGCGACAACCG
GTGCATCAGGACGCCATGAACGAGAATGGCAAAGGCGACACAATGCAGTC
GCCCTTGCGTCTACGTGGCCTTCCCGTGGCGTTAGACACCAGCAAGGAAA
CCAAAAAGAAAGGCTTTGGTTTTTTGGTTGCGGTTGCCTTCACCGTAAAC
TACATCATGGGCACGGGATTTCTCACCTTACCGTTTGCTACAGCCCAAGC
TGGTTCTGTCCTCGCCCTCGTGGCGCTTTTTTCCATGGCGGCCTTAAGCA
ACATCGCGAAGGATTACGTGCTCGAGAGCAGTGCCAGGGCAGAGCTGATA
GAAAACCCCCACTGCTTCTCCACGGACGGCCGCGCCGGTGGAGAGGTGAC
ACCTGCGCTTGTCCGGCAAATTCACTCTTCCCAGGATCTCCCCTTGCTTT
TGACGGTCAAAAAACGCAAGTACGAGATGCCAACGCTTTGCCAGCTCTTC
TTGGGACACTATGGCAAGGTTTTTTACATGCTCTGTCTTTCCGTTTATAT
CTACGGGGCATTGCTTGCGTACGGCACCGTGTTTGCCAATTCCGTTGCAG
CCATGTTTCCCCTTCCGGCCCCGCACGCCGAAGTCTCTTACGTACTTTAC
TTGGGCCTCTTCGCCGTTCTTGTCATCCCACTTTCTTGCCTGGAACTGAC
CGAGCAAATATCAGTACAGGTCGCGTTGGCCTTTTGCCGTGTGCTCATGG
TGGTGTGCATGGTGGGCTCCGTGGCCGCCGCTCTTGTCAGCGGCGAGGCT
GATTATTTCCCCAGCCTTACTGGTGAGGGTGGGGCTGTTGGGATACCGCT
GTGGAATTGGAAGGGACTACCCGTTTTCTTGCCAATTGCGTGTTATTCGT
TTATCTATCATCACTCTATTGCAGGGTTGAGTCATCCTGTGCGGGACAAG
ACCTTGCTAGGCCAAATCTTCTTAGCCACCTTTGTAATTTGTAGTTTATC
GTATGGACTGATTGCTGTCTTTGTGGCGCATTATTTCGGGCCGGAGATGG
CACAGTCGTCAAATTTGGAATGGGATGGGTACGGACGCACGGCTTTTGGC
AAGGCAGTTGGGACATACGTGCTGCTGTTTCCGGCTTTGGACGTGGCAAG
TACGTGGTAGCTCGGAGTGGGTAGAACATAAAGAGGGTGAGGAGAAAGAA
AAGGAGAGCATGAGTTGTTTGTCCAAAGCATCACACTTCTTAGGGCATGG
TCGAAAACAACAGCAGTATGAGTTGTTTGTCCAAAGCATCACACTTCTTA
GGGCATGGTGGAAAACAACAGCATACCGGATATTTACTCCTTGTAACCTT
TTCTCATTCTCTTCTTCACCCCCATGAGTAGGTGCCTTTCCCCTGAACGC
CATCACGTTGGGCAACAACATGCTCGATATGGGAAACACCCAACAAAACG
ATATCGATTGTCAAAGCGCAGGTCCACCTCTAAGAGTGAAGACGGTGGGA
TTCCGCCTCTTGGCCGCGGTGCCACCTCTGGTGGTGGCCGTCTTCGTGCG
TGACCTCGGCCGTATTTCCGAATATGCTGGGACTGTGGGGATAGTCATAA
CCCTTGTCTTTCCCGCTCTCCTCAACCTCCGCTCTCGCACGCTGATGAAG
GAGGTCTTCCAACTGGATTCGGCACGGACTTACTATTCAAATGAATTGTC
AAGAAAGCGATATGGGCCCGTGAATTTGATCATTGGCCTGGGCTTGTTCT
TTTACATTCTTGTCAATTTGCTGATGGAGTGAAAGCGTTCGCGTTAAAAG
AGCCTTTTGCGCACCGTGTGATATTTGTGTACAGATGACATATGGAATGA
GAGCACGCCCCCGCTGCCACCATTAGCACGCCGATGGCCGTTGCCTGATC
TGCAAAACTTACTGTCTGTTAGATCAAAGCAGTAATACAAAAATGCGATG
CGTAATGTCTAAATGCTTGATTCGATTCTCCATGGTGAGGCTCGTTATTT
CTTTGTCTCAATGCTGGCTAAATTTGTTCTCCCCTTTTCCCCCCATCACA
CATACAGATAAATGATAACACGGGTAACCACATCATGGGGGCGACATGCC
GCTTCTTTTCCACCAAAGGCGGCATTCACGGCAGCGACCGCAGGGGGAAA
AGGAAGAGACAGCACCAAAAGCGAAGCACGAGAACACAAGAAAGAAGCAT
TGGCCTTGGTGGGCTGCGGCAAGATGGGTATGGCAATGGGGCGTAACCTC
ATGAGAGCAGGCTATCCGTTGTTTGTGCACGACAAGCACAATGCCGAGGC
CACGGCAAAGTTAGTGGCGGAGGTAAGAGGATATAGATATTCATGTGGGT
AAGAGGACGAAAAGAAGAGTGTATACAAAATCGCTGGCACTAATCACCCG
TAGAGACGAATCTTTTCATCGACATGATATCACCCACCCTTCAATCGATA
GGGAGCGACGGCAGTCACGGATGCACGAGAGCTAGGGACACAAGCCCGCA
CTATCGTTACCATGCTGCCGAACGACGAAGTTTTGCACACGTAAGACAAC
CCACGAAGCTTCTTCTCCCACCCCGTCTCATCCCGACTTTTCATAAAGTT
ACCTTTTCCAACTCCTCGCAAGTGTTTCACAGGAGTTTCTTCCGTCTCTT
CTTCCTGGTGCACTTCATATTGGATGCTCCACCGTCTCACCCTTTACATC
GCGTACGCTTGCCTTAACTCACACGGCCCGCGGCGTCAGTTTTGTGGGTG
CCCCTGTTTTTGCTCGTCCCGACGGGTTTGAAAAGAGACAGGCATATTTT
GTCGTGGGCGGCACGGACTCACGCGCTATTGAGGAGGCACGACCCATCTT
GCTTTCCACGGGCTCGCAAGTTTTTGAGTTTGGGAATGAAGATGCAGGTG
CGGGGTCTGTCGTTAAATTGTGTGGGAACTTCCTCATTGCGAGTGCCATC
GAAAGCATTGGGGAAGCCCTTGCACTGGCCGAGAACCAAGGCCTTGATCG
GGTGAAGGTGATGAAGATGTTCAGCGCCACCATTTTCGATTGCCTGATTT
ACGAAGGGTAAGCTTGGGAATTTTGGCGAAGAATACAGGGATAATTTGCC
AAACATAACCATGTTACTGCTTCCAACATCCCACACCCTCATACATAGCT
ACGGTGATCGGGTATCGCGGCGGGACCATCGACCTGGAGGGTTTGCGCTT
GAACAGGGACATAAGGACGTTTCGTTGATATTGGATACGGCCCGGCGAAG
CAAGGTGCCCATGCCTTTCGCGTCGCTGTTGCAGGACCGTTTTACAAGCG
CGTTGAACCAGCCATGCTTGGGGGGACTAGATTGGAGTGCCATTGGCATT
GACATAAGCAAGAATGCAGGCGAAAACCTGGTGGTAGAAGCAGCTGGACT
CAAAACACAAACCAACAATCAAGCTAGAGATAAGAGCAAGCTGGCAAAAA
ATAAGAGTCAGACAAAGAATTACTAAACAGAAAGCGACCTTCATACCACC
CGGAGAAGTCGAGGTCTAGTTATTCGCTGTGGAATGGGGGGATGTCACCG
CTCTGGGCATAGCTCCATGGTGGAGGAAGATATTATACCTCTCCGAGGCT
GAGGATGGATGGAATCAGCTCCACGGTGGACTAAGTAAGGAGGGCAGCTC
ATGTTTGAGGGAAGAAGGGCACTTGAAGAAGTGTAAGCGATGGTTGTTCA
GAAGTTCTTCATCCCGTCGCTCGCCGAGCACACAACCCATTACGTGGGTC
AATATGATGCCTTGATATGTCTCTGTTGACCACTCGCTAACACACACACT
TAAGCAATCGCAGGCTTGTTACACGAGTCATGGCATACGGCTCGTGGCCG
ATAAAAAATAACGGACCTCACCCATACAACAAGGTAACAAGTGGCAAACC
AAGGTAAGTTTTCAGCACCCTTTGACCCACCATTCTCTGATCTTTGCGGA
GGCCCGCTCAGTCTCCATTATACTTCCTACTATTGACCAAACCAGACAGC
GACGGGTTTGGCCTGCGGTGGTGTTGCTTGCTTTCGTGCTCTATGGCGCT
TTCGTCTACACCCGCGACAGCGCCGGTCACGCTGCTATAGATGCGCGGGG
CCAGCGACAATCTCTAAATCTCCAGCCCAAGGCCGGCGGTATGTGGCAGC
CCACACCAGGCAGCATCGATGGCGTCGTGGTCCTTGGCATGCACCGCTCC
GGAACTTCCATGGTGACGGGTTTGCTGCAGGAAATGGGTTTCCATTTGGG
AGAGCCTGACGATATTCTGGGAGCGAGGGAGGGGGAAAACGACAAGGGCT
TCTTCGAGCGGCTCCAAGTTGTCGTGCAGAACGATAAGCTGATGAAGGAA
CAAGATGTTAACTGGTCTCTCAACATATTTAACTTCAACCACCTCCTGGC
TTTGGTAGGTGAAAGCATTCCATGTGTCAAAACGAAATCTGCGATTCGTA
TTATCTCTTTCCCCTTCAGCAGCTCAAATTAAGACACGTTTCATCCCCTT
CCTGTTAAGGTCACAACAAAATTTATACCCATTTGTCACGGTACCGCGTT
TCCGCCCACCGCTCTTTTTTCATGCAATACATACATGTCCCTTGCAACCT
ACTAAAACCCCTTTTCCTTTTCATGCAGGAACACGCTCTAACGAGCAAGG
TAGACTTCGGACTTGGACGCGCTGCTTTGACCTTTTTCAACAACCCTGTA
CATCATCCATGGGCCGTCAAAGACCCGAGGCTTTGCTTCACTTTGAAATT
TTGGCTGCCCTTCTGGAGGACGCCCCCTGCCGTGCTCTTCGTATACCGGC
ACCCAATGGAAGTGGCCAAATCCTTGATTCATCGTGGGAACGAGTTTGGG
CTGCCCCGCGCACTATATCTCTGGATAGCGTACAACCGCCTGGCGATTCA
AAACTCTCAAGGACTTTGCCGCGTTGTCATTTCGAATGCGGCGCTCATCC
AGGACGGGGCGGGCGTGCTAGGCATGGTCTACGAGCAGCTCCGGGGCTGT
GGTGTCGATGTTCCCCGGAAGATCACCATGAAAGACATCAACAGCTTCAT
TGACCATAGCCTGCACCATCAGACGCAGAATCACGCAAAGGAGTGCCAGC
CCACGATCCGAAAGTCATGGAAGAGCGAGGCTGCCGGTGATCATGAAAAG
GCGCGACAGAATGATGCGTATGCGCATGCTCTGAGGGTGTACTGCGCCAT
GGAGAATGGCTCGGCCTTTTCTCCTTCATTTGAGTGGGAGGACCTTGGAG
ACACAGCACCATCGTAATTTTCATATAGGCATGGAAGACGAACTTCAGAC
AAAATCAAAAGTAGATGAGAAAGAATCGATGCATATAGTGTATTAAGTAA
AAAATAGAAAATAGAAAAGGGAAAAATTTGATTCA

Coding sequence (CDS) from alignment at scaffold_7:609856..615240-

>mRNA_3077 ID=mRNA_3077|Name=jgi.p|Nanoce1779_2|584484|organism=Nannochloropsis oceanica|type=CDS|length=3366bp|location=Sequence derived from alignment at scaffold_7:609856..615240- (Nannochloropsis oceanica)
GAACACGCTCTAACGAGCAAGGTAGACTTCGGACTTGGACGCGCTGCTTT
GACCTTTTTCAACAACCCTGTACATCATCCATGGGCCGTCAAAGACCCGA
GGCTTTGCTTCACTTTGAAATTTTGGCTGCCCTTCTGGAGGACGCCCCCT
GCCGTGCTCTTCGTATACCGGCACCCAATGGAAGTGGCCAAATCCTTGAT
TCATCGTGGGAACGAGTTTGGGCTGCCCCGCGCACTATATCTCTGGATAG
CGTACAACCGCCTGGCGATTCAAAACTCTCAAGGACTTTGCCGCGTTGTC
ATTTCGAATGCGGCGCTCATCCAGGACGGGGCGGGCGTGCTAGGCATGGT
CTACGAGCAGCTCCGGGGCTGTGGTGTCGATGTTCCCCGGAAGATCACCA
TGAAAGACATCAACAGCTTCATTGACCATAGCCTGCACCATCAGACGCAG
AATCACGCAAAGGAGTGCCAGCCCACGATCCGAAAGTCATGGAAGAGCGA
GGCTGCCGGTGATCATGAAAAGGCGCGACAGAATGATGCGTATGCGCATG
CTCTGAGGGTGTACTGCGCCATGGAGAATGGCTCGGCCTTTTCTCCTTCA
TTTGAGTGGGAGGACCTTGGAGACACAGCACCATCGTAAACAGCGACGGG
TTTGGCCTGCGGTGGTGTTGCTTGCTTTCGTGCTCTATGGCGCTTTCGTC
TACACCCGCGACAGCGCCGGTCACGCTGCTATAGATGCGCGGGGCCAGCG
ACAATCTCTAAATCTCCAGCCCAAGGCCGGCGGTATGTGGCAGCCCACAC
CAGGCAGCATCGATGGCGTCGTGGTCCTTGGCATGCACCGCTCCGGAACT
TCCATGGTGACGGGTTTGCTGCAGGAAATGGGTTTCCATTTGGGAGAGCC
TGACGATATTCTGGGAGCGAGGGAGGGGGAAAACGACAAGGGCTTCTTCG
AGCGGCTCCAAGTTGTCGTGCAGAACGATAAGCTGATGAAGGAACAAGAT
GTTAACTGGTCTCTCAACATATTTAACTTCAACCACCTCCTGGCTTTGAT
GGCATACGGCTCGTGGCCGATAAAAAATAACGGACCTCACCCATACAACA
AGGTAACAAGTGGCAAACCAAGGAACACGCTCTAACGAGCAAGGTAGACT
TCGGACTTGGACGCGCTGCTTTGACCTTTTTCAACAACCCTGTACATCAT
CCATGGGCCGTCAAAGACCCGAGGCTTTGCTTCACTTTGAAATTTTGGCT
GCCCTTCTGGAGGACGCCCCCTGCCGTGCTCTTCGTATACCGGCACCCAA
TGGAAGTGGCCAAATCCTTGATTCATCGTGGGAACGAGTTTGGGCTGCCC
CGCGCACTATATCTCTGGATAGCGTACAACCGCCTGGCGATTCAAAACTC
TCAAGGACTTTGCCGCGTTGTCATTTCGAATGCGGCGCTCATCCAGGACG
GGGCGGGCGTGCTAGGCATGGTCTACGAGCAGCTCCGGGGCTGTGGTGTC
GATGTTCCCCGGAAGATCACCATGAAAGACATCAACAGCTTCATTGACCA
TAGCCTGCACCATCAGACGCAGAATCACGCAAAGGAGTGCCAGCCCACGA
TCCGAAAGTCATGGAAGAGCGAGGCTGCCGGTGATCATGAAAAGGCGCGA
CAGAATGATGCGTATGCGCATGCTCTGAGGGTGTACTGCGCCATGGAGAA
TGGCTCGGCCTTTTCTCCTTCATTTGAGTGGGAGGACCTTGGAGACACAG
CACCATCGTAAACAGCGACGGGTTTGGCCTGCGGTGGTGTTGCTTGCTTT
CGTGCTCTATGGCGCTTTCGTCTACACCCGCGACAGCGCCGGTCACGCTG
CTATAGATGCGCGGGGCCAGCGACAATCTCTAAATCTCCAGCCCAAGGCC
GGCGGTATGTGGCAGCCCACACCAGGCAGCATCGATGGCGTCGTGGTCCT
TGGCATGCACCGCTCCGGAACTTCCATGGTGACGGGTTTGCTGCAGGAAA
TGGGTTTCCATTTGGGAGAGCCTGACGATATTCTGGGAGCGAGGGAGGGG
GAAAACGACAAGGGCTTCTTCGAGCGGCTCCAAGTTGTCGTGCAGAACGA
TAAGCTGATGAAGGAACAAGATGTTAACTGGTCTCTCAACATATTTAACT
TCAACCACCTCCTGGCTTTGATGGCATACGGCTCGTGGCCGATAAAAAAT
AACGGACCTCACCCATACAACAAGGTAACAAGTGGCAAACCAAGGAACAC
GCTCTAACGAGCAAGGTAGACTTCGGACTTGGACGCGCTGCTTTGACCTT
TTTCAACAACCCTGTACATCATCCATGGGCCGTCAAAGACCCGAGGCTTT
GCTTCACTTTGAAATTTTGGCTGCCCTTCTGGAGGACGCCCCCTGCCGTG
CTCTTCGTATACCGGCACCCAATGGAAGTGGCCAAATCCTTGATTCATCG
TGGGAACGAGTTTGGGCTGCCCCGCGCACTATATCTCTGGATAGCGTACA
ACCGCCTGGCGATTCAAAACTCTCAAGGACTTTGCCGCGTTGTCATTTCG
AATGCGGCGCTCATCCAGGACGGGGCGGGCGTGCTAGGCATGGTCTACGA
GCAGCTCCGGGGCTGTGGTGTCGATGTTCCCCGGAAGATCACCATGAAAG
ACATCAACAGCTTCATTGACCATAGCCTGCACCATCAGACGCAGAATCAC
GCAAAGGAGTGCCAGCCCACGATCCGAAAGTCATGGAAGAGCGAGGCTGC
CGGTGATCATGAAAAGGCGCGACAGAATGATGCGTATGCGCATGCTCTGA
GGGTGTACTGCGCCATGGAGAATGGCTCGGCCTTTTCTCCTTCATTTGAG
TGGGAGGACCTTGGAGACACAGCACCATCGTAAACAGCGACGGGTTTGGC
CTGCGGTGGTGTTGCTTGCTTTCGTGCTCTATGGCGCTTTCGTCTACACC
CGCGACAGCGCCGGTCACGCTGCTATAGATGCGCGGGGCCAGCGACAATC
TCTAAATCTCCAGCCCAAGGCCGGCGGTATGTGGCAGCCCACACCAGGCA
GCATCGATGGCGTCGTGGTCCTTGGCATGCACCGCTCCGGAACTTCCATG
GTGACGGGTTTGCTGCAGGAAATGGGTTTCCATTTGGGAGAGCCTGACGA
TATTCTGGGAGCGAGGGAGGGGGAAAACGACAAGGGCTTCTTCGAGCGGC
TCCAAGTTGTCGTGCAGAACGATAAGCTGATGAAGGAACAAGATGTTAAC
TGGTCTCTCAACATATTTAACTTCAACCACCTCCTGGCTTTGATGGCATA
CGGCTCGTGGCCGATAAAAAATAACGGACCTCACCCATACAACAAGGTAA
CAAGTGGCAAACCAAG

Synonyms

Publications