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Properties
| Property Name | Value |
|---|
| TranscriptId | 537471 |
| Track | FilteredModels2 |
| ProteinId | 537385 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:750813..753628 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_306 ID=mRNA_306|Name=jgi.p|Nanoce1779_2|537385|organism=Nannochloropsis oceanica|type=mRNA|length=2433bp
GTGTTGATTGTCAGGTGCGCTCCGTTTGCGTCCTAGACTCCTGTAAATTC
GTTTGGAATTTGATGATGAGCGGTGTGAGTTTTGAATGTGAGACGCGCGT
GTCGCACACTGCAAGGGGCTGCGCCCTTGCCTGCCTTACTCATCTCTTGG
TGTGGAGGTATATGAAGCACCTGTGAGTCGCGTTTAAAAGAACTGACCCG
CCAATTTTGTGGGTCCTCCCGACAGGAGAGCCTCTCGGGGTTCTTCCACC
GGGACCTGAGGGGCAATCGTCACACTTTCTTGCACGAAGAAATACAGCAG
GATGGATGCATCAACGGGTTACGACCAGTGCTGCCACAATCCCTCCACCC
ACACAAGATGTGCTGGGTGGAGGTCATGCATATTTATTGATTCATACACC
ATTGTCAACAATGTCAATCACACGCACACGATTTCCTTGTCGCACGTAAT
TTCCCCGCTTGACAACAACAACCAGAAGCCATGCGGAGCTCCGTCATCGC
GGTGGCTTGCCTCGTGGCTGCCTGCGGCAGAACCCAGGCCTTTGTCCTTC
CTAGCAAGTCTTCCTCCACAATCTCCTCCGCTCGACCGCAATCAAGAGCT
CTGAGCAGCAGCACAGCCCTGGCGGCGTTGTCCACCTCCATGCATGACCG
ACGTGGCCTCCTCTTCAAGACGACAGGGTCGTTGCTTGGGTTGGCCGGCC
TGGCCTTGGTCCGCCCCGCCAATGCCTATGACGAGGTGCCACTCGTCCGT
GACAAGTTGGGCGGGTTGCTGGAACCGTACACGGATATTGCCAAGGGTCT
CAAAGTCTCCCGCCCCTCCGGGTGGAACCAATTTGACGGCTCCCCCGAGA
CATACGTGGTAAAGTGGAGCGATATCATCAACCGCGACGAGCTCGTCGTG
TTGAACTCCACACCTGTCAAGGCATCCACCACTTCCGTGGAAGCTCTGGG
GGATGTCCAAGAAATTGGAAAAAAACTTGCGAAAGGCCGCGGAGCCGAGC
TGGTCGAGGCCAAGGCGAGGCTGACGGAGGGGGTATTGTTTTATGAGTTT
GAGTTCAAGGGGGAGGCGATCTCGGAGTTGGCGTCTTTGTGCGTGGCAAA
GGGGCGACTGTGGAATCTGAGTGCGACGGCCGCGACAAAACGATGGGCGA
AGAAGAGGGATTTGTTCAAGGGGGTGATTGGTTCCTTCTTGCCTAAGCTC
TAAGCAACGGGGGGAAGAAGCTGTGCCATTAAAGCTATTCTTGTTTCTGA
TTTCAGTCTTGGAGTGTCTAGATTCGTGTATCTGTGAGTGCAAGTTGAGT
GAGCATCATCTTTGTCGTTGGAGTCTTTTAAAGTCAAGCAGTACAATTCT
TCAGGGGCCATGTCCCCCTCCAGAGGTAGGAAGCAATTAATCAATCGCAA
AAACTTTTAAAAGATGCGCACGCACACAATGATAAGGACGAGTTATAGAC
GGGCATCGTACTTTCAAGATAAACATAGGCACTGGCACCGGCACCAGCCG
TGAGACACCTTGCTTATTCTCCCCCTGTCCGCATGCTTTGTGAACATACC
CACCCGCTCTATCATCTTGTTTTTTCTTTAACTTTCTCAACTCCTTCTTT
GCTTCTCCCTCCTTCTTCTGCTGCCTTCTCCTCCTTCTTCCCTTTCCCAC
CCAACGTTCCCGTATCTGTGTATTCTGTCTATTCCCTTCACTTGCGTGGT
TTTTTGGTAGCAATGTAAGCCATCATATCACATGGTCGTGAAGCCCCCCC
ACCTCTCTCCTCCCGCCTGATCCCCGGGCCCAAGCGGCCACTTCAGTCGA
TAGCGTGCCAGCTCTAACATCCGACCGCAAACCGACCCATGCACGCATTT
CCCTTGTATTTTCATGCTCTTCGTCATCTCCATCTTCTTTTTCCACGTAA
ATAGATAAACGAAGGCGCTACTAACAAAACCCCTATTGAATCATACAGCT
TTCTCCTACTTTCCTCTTCCCTCCCTCCCTCCATCCATCACTCCCTCCAT
CCCTTCCTTCCACTCTGTTCACATGCAATCACATGCAAAATGGTATGTGC
CATAAACCCCTTCTGTCGCTCCCTTTTTCGGCGCCATCACGCGTCAAACT
CCTTCCCTCTATCTATCCCTCCGTCCTTACTCACTACTTCTTTGCCTTAA
GCGCTAAAACAGACAAAGTCGCGAGCAGGGCTCCTCCCAGCATGGCTACT
GCCGTATGGGTGCACCAGAACGGAATTCCATTGCTGGTTCCACTGCTGCT
GCCCTTTAAGGCGCCACGGCGGGGGGGGGCGCCGTTCAGGTGTTCGAGCA
AGACCTACGGAATAAATGAGCGGAAAAAACAGGCGGCATGATGAATCGTC
ATGCCCCATTTGACTTCTTGAATTTCGACATGAACAAACTACCCTTCTCT
CTTCCCCCCCCTCCCTCCTGTCCTCTCTCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|537385 >mRNA_306-protein ID=mRNA_306-protein|Name=jgi.p|Nanoce1779_2|537385|organism=Nannochloropsis oceanica|type=polypeptide|length=241bp
MRSSVIAVACLVAACGRTQAFVLPSKSSSTISSARPQSRALSSSTALAAL
STSMHDRRGLLFKTTGSLLGLAGLALVRPANAYDEVPLVRDKLGGLLEPY
TDIAKGLKVSRPSGWNQFDGSPETYVVKWSDIINRDELVVLNSTPVKAST
TSVEALGDVQEIGKKLAKGRGAELVEAKARLTEGVLFYEFEFKGEAISEL
ASLCVAKGRLWNLSATAATKRWAKKRDLFKGVIGSFLPKL* back to topmRNA from alignment at scaffold_3:750813..753628- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_306 ID=mRNA_306|Name=jgi.p|Nanoce1779_2|537385|organism=Nannochloropsis oceanica|type=mRNA|length=2816bp|location=Sequence derived from alignment at scaffold_3:750813..753628- (Nannochloropsis oceanica)
GTGTTGATTGTCAGGTGCGCTCCGTTTGCGTCCTAGACTCCTGTAAATTC
GTTTGGAATTTGATGATGAGCGGTGTGAGTTTTGAATGTGAGACGCGCGT
GTCGCACACTGCAAGGGGCTGCGCCCTTGCCTGCCTTACTCATCTCTTGG
TGTGGAGGTATATGAAGCACCTGTGAGTCGCGTTTAAAAGAACTGACCCG
CCAATTTTGTGGGTCCTCCCGACAGGAGAGCCTCTCGGGGTTCTTCCACC
GGGACCTGAGGGGCAATCGTCACACTTTCTTGCACGAAGAAATACAGCAG
GATGGATGCATCAACGGGTTACGACCAGTGCTGCCACAATCCCTCCACCC
ACACAAGATGTGCTGGGTGGAGGTCATGCATATTTATTGATTCATACACC
ATTGTCAACAATGTCAATCACACGCACACGATTTCCTTGTCGCACGTAAT
TTCCCCGCTTGACAACAACAACCAGAAGCCATGCGGAGCTCCGTCATCGC
GGTGGCTTGCCTCGTGGCTGCCTGCGGCAGAACCCAGGCCTTTGTCCTTC
CTAGCAAGTCTTCCTCCACAATCTCCTCCGCTCGACCGCAATCAAGAGCT
CTGAGCAGCAGCACAGCCCTGGCGGCGTTGTCCACCTCCATGCATGACCG
ACGTGGCCTCCTCTTCAAGACGACAGGGTCGTTGCTTGGGTTGGCCGGCC
TGGCCTTGGTCCGCCCCGCCAATGCCTATGACGAGGTGCCACTCGTCCGT
GACAAGTTGGGCGGGTTGCTGGAACCGTACACGGATATTGCCAAGGTAAG
GGGGAGGGGAGAAGGGTGAAGGGGGTTTTGATACTGAAGGGGCAAGAGGG
CGAAGAGGCGCTTGGCAAGATAGATGAATCAACAGACTTGTTTTTTCGTT
CATTCAATCTCTATGGCGATGGGTCTGAAGGAAAGACCTGAATAACGTGT
GTCTCCCACGTGTCATCGAGAGGCAAAGTGCTGATCTGAGGATGTCTTCT
CTCCTCTGATTTTGGTTGCGAAAAACAGTGAGTGTCTGTGGGGGAAAAAG
CTGAAGATTTCCATGCGTCAGATACTCAAGTCCTCGGTCTTTTGAAACAG
AAAATTCTAAGGGTACAATCACATGCAAGCACTAAAAGGAACCCCTCCCC
CACTTCATTCGCACACATATCCGTACAGGGTCTCAAAGTCTCCCGCCCCT
CCGGGTGGAACCAATTTGACGGCTCCCCCGAGACATACGTGGTAAAGTGG
AGCGATATCATCAACCGCGACGAGCTCGTCGTGTTGAACTCCACACCTGT
CAAGGCATCCACCACTTCCGTGGAAGCTCTGGGGGATGTCCAAGAAATTG
GAAAAAAACTTGCGAAAGGCCGCGGAGCCGAGCTGGTCGAGGCCAAGGCG
AGGCTGACGGAGGGGGTATTGTTTTATGAGTTTGAGTTCAAGGGGGAGGC
GATCTCGGAGTTGGCGTCTTTGTGCGTGGCAAAGGGGCGACTGTGGAATC
TGAGTGCGACGGCCGCGACAAAACGATGGGCGAAGAAGAGGGATTTGTTC
AAGGGGGTGATTGGTTCCTTCTTGCCTAAGCTCTAAGCAACGGGGGGAAG
AAGCTGTGCCATTAAAGCTATTCTTGTTTCTGATTTCAGTCTTGGAGTGT
CTAGATTCGTGTATCTGTGAGTGCAAGTTGAGTGAGCATCATCTTTGTCG
TTGGAGTCTTTTAAAGTCAAGCAGTACAATTCTTCAGGGGCCATGTCCCC
CTCCAGAGGTAGGAAGCAATTAATCAATCGCAAAAACTTTTAAAAGATGC
GCACGCACACAATGATAAGGACGAGTTATAGACGGGCATCGTACTTTCAA
GATAAACATAGGCACTGGCACCGGCACCAGCCGTGAGACACCTTGCTTAT
TCTCCCCCTGTCCGCATGCTTTGTGAACATACCCACCCGCTCTATCATCT
TGTTTTTTCTTTAACTTTCTCAACTCCTTCTTTGCTTCTCCCTCCTTCTT
CTGCTGCCTTCTCCTCCTTCTTCCCTTTCCCACCCAACGTTCCCGTATCT
GTGTATTCTGTCTATTCCCTTCACTTGCGTGGTTTTTTGGTAGCAATGTA
AGCCATCATATCACATGGTCGTGAAGCCCCCCCACCTCTCTCCTCCCGCC
TGATCCCCGGGCCCAAGCGGCCACTTCAGTCGATAGCGTGCCAGCTCTAA
CATCCGACCGCAAACCGACCCATGCACGCATTTCCCTTGTATTTTCATGC
TCTTCGTCATCTCCATCTTCTTTTTCCACGTAAATAGATAAACGAAGGCG
CTACTAACAAAACCCCTATTGAATCATACAGCTTTCTCCTACTTTCCTCT
TCCCTCCCTCCCTCCATCCATCACTCCCTCCATCCCTTCCTTCCACTCTG
TTCACATGCAATCACATGCAAAATGGTATGTGCCATAAACCCCTTCTGTC
GCTCCCTTTTTCGGCGCCATCACGCGTCAAACTCCTTCCCTCTATCTATC
CCTCCGTCCTTACTCACTACTTCTTTGCCTTAAGCGCTAAAACAGACAAA
GTCGCGAGCAGGGCTCCTCCCAGCATGGCTACTGCCGTATGGGTGCACCA
GAACGGAATTCCATTGCTGGTTCCACTGCTGCTGCCCTTTAAGGCGCCAC
GGCGGGGGGGGGCGCCGTTCAGGTGTTCGAGCAAGACCTACGGAATAAAT
GAGCGGAAAAAACAGGCGGCATGATGAATCGTCATGCCCCATTTGACTTC
TTGAATTTCGACATGAACAAACTACCCTTCTCTCTTCCCCCCCCTCCCTC
CTGTCCTCTCTCCCCC back to topCoding sequence (CDS) from alignment at scaffold_3:750813..753628- >mRNA_306 ID=mRNA_306|Name=jgi.p|Nanoce1779_2|537385|organism=Nannochloropsis oceanica|type=CDS|length=1446bp|location=Sequence derived from alignment at scaffold_3:750813..753628- (Nannochloropsis oceanica)
GGTCTCAAAGTCTCCCGCCCCTCCGGGTGGAACCAATTTGACGGCTCCCC
CGAGACATACGTGGTAAAGTGGAGCGATATCATCAACCGCGACGAGCTCG
TCGTGTTGAACTCCACACCTGTCAAGGCATCCACCACTTCCGTGGAAGCT
CTGGGGGATGTCCAAGAAATTGGAAAAAAACTTGCGAAAGGCCGCGGAGC
CGAGCTGGTCGAGGCCAAGGCGAGGCTGACGGAGGGGGTATTGTTTTATG
AGTTTGAGTTCAAGGGGGAGGCGATCTCGGAGTTGGCGTCTTTGTGCGTG
GCAAAGGGGCGACTGTGGAATCTGAGTGCGACGGCCGCGACAAAACGATG
GGCGAAGAAGAGGGATTTGTTCAAGGGGGTGATTGGTTCCTTCTTGCCTA
AGCTCTAAATGCGGAGCTCCGTCATCGCGGTGGCTTGCCTCGTGGCTGCC
TGCGGCAGAACCCAGGCCTTTGTCCTTCCTAGCAAGTCTTCCTCCACAAT
CTCCTCCGCTCGACCGCAATCAAGAGCTCTGAGCAGCAGCACAGCCCTGG
CGGCGTTGTCCACCTCCATGCATGACCGACGTGGCCTCCTCTTCAAGACG
ACAGGGTCGTTGCTTGGGTTGGCCGGCCTGGCCTTGGTCCGCCCCGCCAA
TGCCTATGACGAGGTGCCACTCGTCCGTGACAAGTTGGGCGGGTTGCTGG
AACCGTACACGGATATTGCCAAGGGTCTCAAAGTCTCCCGCCCCTCCGGG
TGGAACCAATTTGACGGCTCCCCCGAGACATACGTGGTAAAGTGGAGCGA
TATCATCAACCGCGACGAGCTCGTCGTGTTGAACTCCACACCTGTCAAGG
CATCCACCACTTCCGTGGAAGCTCTGGGGGATGTCCAAGAAATTGGAAAA
AAACTTGCGAAAGGCCGCGGAGCCGAGCTGGTCGAGGCCAAGGCGAGGCT
GACGGAGGGGGTATTGTTTTATGAGTTTGAGTTCAAGGGGGAGGCGATCT
CGGAGTTGGCGTCTTTGTGCGTGGCAAAGGGGCGACTGTGGAATCTGAGT
GCGACGGCCGCGACAAAACGATGGGCGAAGAAGAGGGATTTGTTCAAGGG
GGTGATTGGTTCCTTCTTGCCTAAGCTCTAAATGCGGAGCTCCGTCATCG
CGGTGGCTTGCCTCGTGGCTGCCTGCGGCAGAACCCAGGCCTTTGTCCTT
CCTAGCAAGTCTTCCTCCACAATCTCCTCCGCTCGACCGCAATCAAGAGC
TCTGAGCAGCAGCACAGCCCTGGCGGCGTTGTCCACCTCCATGCATGACC
GACGTGGCCTCCTCTTCAAGACGACAGGGTCGTTGCTTGGGTTGGCCGGC
CTGGCCTTGGTCCGCCCCGCCAATGCCTATGACGAGGTGCCACTCGTCCG
TGACAAGTTGGGCGGGTTGCTGGAACCGTACACGGATATTGCCAAG back to top
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