Properties
| Property Name | Value |
|---|
| TranscriptId | 584490 |
| Track | FilteredModels2 |
| ProteinId | 584404 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:563880..566201 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3057 ID=mRNA_3057|Name=jgi.p|Nanoce1779_2|584404|organism=Nannochloropsis oceanica|type=mRNA|length=2192bp
ACAGAAGAGGAAAAAATACTACACGTAAATCAAGAGGCCGCATCGTTGCT
CACTGAACAAACCAGCTTTGTCGTGTCCAGCCAACTCCAACCTGTCAGCA
GCGGCATCAGCAACATCATCAGTCCTTGCAAGGGGAATGCTGGGCGGAGG
TAGGTGGCGGCGGATGACACGACTACCAGCCTCATTGCTGATGCAGCGTG
CGGCCGCCAGCAGTAGCGGGGCCTCGGTTGCAATTACGGGAAGTAGCGCG
ACGGAGGATTTCAACCGCGACCACACGGACTACTTGGCCCGTATCCTTAA
TGCCCGTGTCTACGAGATTGCCATCGAGACGCCCTTACAACCAGCGCCCT
GCATGTCCAAGGCGATTCATAACAATGTGTTGCTAAAGAGAGAAGATTTG
CAGCCCGTCTTCTCTTTCAAGCTTCGAGGTGCTTATAATAAAATCGTCAG
CACGCCTGCCGCAGACCTGGAACGGGGCGTCGTGGCCTGCTCGGCAGGCA
ACCACGCCCAAGGCGTTGCACTCTCCGCTTCGCGCAAAAATATCAAGGCC
GTCATTGTCATGCCGTTGGCCACACCCCAGATTAAAGTGAATGCGGTCCG
ACGATTTGGAGGACCTACGGTGACGGTGAAGTTGCACGGAAAGAACTACG
ATGAAGCGTCGGAGGAAGCATTGCGGTTGGCAAGGGAGGAGGGCTTGACG
ATGATCCATCCTTTTGATGACCCCGACGTTATTGCGGGGCAAGGCACAAT
AGGCATGGAGATCTTGAAAGCTACAAACGGGCAGCCATTAGATGCCATCT
TTGTGTGCGTGGGTGGTGGGGGTTTGCTTTCTGGAATAGCTTCCTATGTC
AAGGCGGTGCGGCCGTCAGTAAAAGTGATTGGGGTCGAGGCGGAGGACGC
TGCGGGCATGACTACCTCTTTGGAGGCGGGTCACGTTATAACCTTGGATA
GAGTCGGGTTGTTTGCCGACGGGGCAGCAGTACGGGTTGTGGGGAAGGAA
ACGTTTCGCGTGTGTAGTCAGTTGGTAGATGAGATGGTGACAGTGACAAC
GGACGAGATCTGCGCAGCGATCAAGGCGGGGTTTCAGGACACGCGCAGTG
TGTTGGAGCCGGCAGGGGCGCTGGCGATAGCTGGGGCAAAGAAATATTGC
GCGGCGGAACAGTGGAGAGACAAGACGATCGTGGCGATTGCCTCGGGCGC
GAACATGGACTTCGACCGGTTGCGGTTTGTGAGTGAACGGTCGGATTCGA
CTGAGTCGCTGCTTTCGGTGAGAATAAGTGAGCGGCCCGGGAGCTTCAGA
CAATTGTACACGGGAATTTTCCCAAGAAATGTGACAGAGTTTTCATACCG
ATTCAATAGTCCGGATACGGCTGATGTGATCATCAGCTTTCAATCCATGC
CTAACATGAATCGGGAGGAAGATAAGCAGCAGGTGCTGGAAAACATTCGT
CACCTCGGTACGTCTTTATGTCTGCAGAGTCGTTTGATGTGGTTTCCGAC
CTTATATTTGTTGAGTGTACCTCTCCATTCCCTCTCATCTCCAACAACCC
ACGTACACACAGAGTTCGAGGTCGTCGACCTGAGCGCCAACGAAATGGCC
AAGGCTCACGCCCGATACCTCGCTGGCGGGCGGGCCCCACACGTCAAAAA
TGAGCAGCTTTATCGATTTGAGTTCCCCGAGCGACCAGGTGCTTTGCATG
CCTTCTTGACGGACCTGAGCAAGGGTTGGAACGTCAGTCTCTTCCATTAC
CGTAACCAGGGCGGGGACATTGGTCGTGTCCTTGTTGGGCTGCAGGTTCC
CCCTGAGGAATTTGCAGAGTTTCAGAAGTGGTTGGAAACATTGTCGCATT
TGGGCTACGTCTATTTCGCTGAGACGAAGAATCCTGTTTATTTTCAATTT
CTGTACTGACCAGAGACGAGGTGAGAAGAGACGGAAGGAGAGGAGAGGGG
GGCTGCGTGATGCATGTGTGGCTGCATTTAGAATTGACTGGACCCTAACT
GTGTGCCGCATGTTTCTAGGATGTAGGATAAGTTCCTTGCCTTTTTAAAG
AGCACAATAAGATTTCTATTTCAATTAAAAAAGAAAAAAGAAAAAAGAAT
GACCTATGCGGGGGAATATTGCGGGGGGCAAGGTCACGAATAATTCCCCA
CTTTGGTGATCTCAGGACGCTTGACTTCACTAATCACATCAT back to topprotein sequence of jgi.p|Nanoce1779_2|584404 >mRNA_3057-protein ID=mRNA_3057-protein|Name=jgi.p|Nanoce1779_2|584404|organism=Nannochloropsis oceanica|type=polypeptide|length=591bp
MLGGGRWRRMTRLPASLLMQRAAASSSGASVAITGSSATEDFNRDHTDYL
ARILNARVYEIAIETPLQPAPCMSKAIHNNVLLKREDLQPVFSFKLRGAY
NKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIK
VNAVRRFGGPTVTVKLHGKNYDEASEEALRLAREEGLTMIHPFDDPDVIA
GQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGIASYVKAVRPSVKVIGV
EAEDAAGMTTSLEAGHVITLDRVGLFADGAAVRVVGKETFRVCSQLVDEM
VTVTTDEICAAIKAGFQDTRSVLEPAGALAIAGAKKYCAAEQWRDKTIVA
IASGANMDFDRLRFVSERSDSTESLLSVRISERPGSFRQLYTGIFPRNVT
EFSYRFNSPDTADVIISFQSMPNMNREEDKQQVLENIRHLGTSLCLQSRL
MWFPTLYLLSVPLHSLSSPTTHVHTEFEVVDLSANEMAKAHARYLAGGRA
PHVKNEQLYRFEFPERPGALHAFLTDLSKGWNVSLFHYRNQGGDIGRVLV
GLQVPPEEFAEFQKWLETLSHLGYVYFAETKNPVYFQFLY* back to topmRNA from alignment at scaffold_7:563880..566201+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3057 ID=mRNA_3057|Name=jgi.p|Nanoce1779_2|584404|organism=Nannochloropsis oceanica|type=mRNA|length=2322bp|location=Sequence derived from alignment at scaffold_7:563880..566201+ (Nannochloropsis oceanica)
ACAGAAGAGGAAAAAATACTACACGTAAATCAAGAGGCCGCATCGTTGCT
CACTGAACAAACCAGCTTTGTCGTGTCCAGCCAACTCCAACCTGTCAGCA
GCGGCATCAGCAACATCATCAGTCCTTGCAAGGGGAATGCTGGGCGGAGG
TAGGTGGCGGCGGATGACACGACTACCAGCCTCATTGCTGATGCAGCGTG
CGGCCGCCAGCAGTAGCGGGGCCTCGGTTGCAATTACGGGAAGTAGCGCG
ACGGAGGATTTCAACCGCGACCACACGGACTACTTGGCCCGTATCCTTAA
TGCCCGTGTCTACGAGATTGCCATCGAGACGCCCTTACAACCAGCGCCCT
GCATGTCCAAGGCGATTCATAACAATGTGTTGCTAAAGGTATGCGGAATT
GATGCGAGATCGTGTCCTCTTAGACTTATCTTGATGGCGTATCATCGCGC
ATAACCTGTCTTTCTCTCTCACAGCCGCACATCACATAAACTCGCACGCT
CTCCCAATCCCTACACAGAGAGAAGATTTGCAGCCCGTCTTCTCTTTCAA
GCTTCGAGGTGCTTATAATAAAATCGTCAGCACGCCTGCCGCAGACCTGG
AACGGGGCGTCGTGGCCTGCTCGGCAGGCAACCACGCCCAAGGCGTTGCA
CTCTCCGCTTCGCGCAAAAATATCAAGGCCGTCATTGTCATGCCGTTGGC
CACACCCCAGATTAAAGTGAATGCGGTCCGACGATTTGGAGGACCTACGG
TGACGGTGAAGTTGCACGGAAAGAACTACGATGAAGCGTCGGAGGAAGCA
TTGCGGTTGGCAAGGGAGGAGGGCTTGACGATGATCCATCCTTTTGATGA
CCCCGACGTTATTGCGGGGCAAGGCACAATAGGCATGGAGATCTTGAAAG
CTACAAACGGGCAGCCATTAGATGCCATCTTTGTGTGCGTGGGTGGTGGG
GGTTTGCTTTCTGGAATAGCTTCCTATGTCAAGGCGGTGCGGCCGTCAGT
AAAAGTGATTGGGGTCGAGGCGGAGGACGCTGCGGGCATGACTACCTCTT
TGGAGGCGGGTCACGTTATAACCTTGGATAGAGTCGGGTTGTTTGCCGAC
GGGGCAGCAGTACGGGTTGTGGGGAAGGAAACGTTTCGCGTGTGTAGTCA
GTTGGTAGATGAGATGGTGACAGTGACAACGGACGAGATCTGCGCAGCGA
TCAAGGCGGGGTTTCAGGACACGCGCAGTGTGTTGGAGCCGGCAGGGGCG
CTGGCGATAGCTGGGGCAAAGAAATATTGCGCGGCGGAACAGTGGAGAGA
CAAGACGATCGTGGCGATTGCCTCGGGCGCGAACATGGACTTCGACCGGT
TGCGGTTTGTGAGTGAACGGTCGGATTCGACTGAGTCGCTGCTTTCGGTG
AGAATAAGTGAGCGGCCCGGGAGCTTCAGACAATTGTACACGGGAATTTT
CCCAAGAAATGTGACAGAGTTTTCATACCGATTCAATAGTCCGGATACGG
CTGATGTGATCATCAGCTTTCAATCCATGCCTAACATGAATCGGGAGGAA
GATAAGCAGCAGGTGCTGGAAAACATTCGTCACCTCGGTACGTCTTTATG
TCTGCAGAGTCGTTTGATGTGGTTTCCGACCTTATATTTGTTGAGTGTAC
CTCTCCATTCCCTCTCATCTCCAACAACCCACGTACACACAGAGTTCGAG
GTCGTCGACCTGAGCGCCAACGAAATGGCCAAGGCTCACGCCCGATACCT
CGCTGGCGGGCGGGCCCCACACGTCAAAAATGAGCAGCTTTATCGATTTG
AGTTCCCCGAGCGACCAGGTGCTTTGCATGCCTTCTTGACGGACCTGAGC
AAGGGTTGGAACGTCAGTCTCTTCCATTACCGTAACCAGGGCGGGGACAT
TGGTCGTGTCCTTGTTGGGCTGCAGGTTCCCCCTGAGGAATTTGCAGAGT
TTCAGAAGTGGTTGGAAACATTGTCGCATTTGGGCTACGTCTATTTCGCT
GAGACGAAGAATCCTGTTTATTTTCAATTTCTGTACTGACCAGAGACGAG
GTGAGAAGAGACGGAAGGAGAGGAGAGGGGGGCTGCGTGATGCATGTGTG
GCTGCATTTAGAATTGACTGGACCCTAACTGTGTGCCGCATGTTTCTAGG
ATGTAGGATAAGTTCCTTGCCTTTTTAAAGAGCACAATAAGATTTCTATT
TCAATTAAAAAAGAAAAAAGAAAAAAGAATGACCTATGCGGGGGAATATT
GCGGGGGGCAAGGTCACGAATAATTCCCCACTTTGGTGATCTCAGGACGC
TTGACTTCACTAATCACATCAT back to topCoding sequence (CDS) from alignment at scaffold_7:563880..566201+ >mRNA_3057 ID=mRNA_3057|Name=jgi.p|Nanoce1779_2|584404|organism=Nannochloropsis oceanica|type=CDS|length=3546bp|location=Sequence derived from alignment at scaffold_7:563880..566201+ (Nannochloropsis oceanica)
ATGCTGGGCGGAGGTAGGTGGCGGCGGATGACACGACTACCAGCCTCATT
GCTGATGCAGCGTGCGGCCGCCAGCAGTAGCGGGGCCTCGGTTGCAATTA
CGGGAAGTAGCGCGACGGAGGATTTCAACCGCGACCACACGGACTACTTG
GCCCGTATCCTTAATGCCCGTGTCTACGAGATTGCCATCGAGACGCCCTT
ACAACCAGCGCCCTGCATGTCCAAGGCGATTCATAACAATGTGTTGCTAA
AGAGAGAAGATTTGCAGCCCGTCTTCTCTTTCAAGCTTCGAGGTGCTTAT
AATAAAATCGTCAGCACGCCTGCCGCAGACCTGGAACGGGGCGTCGTGGC
CTGCTCGGCAGGCAACCACGCCCAAGGCGTTGCACTCTCCGCTTCGCGCA
AAAATATCAAGGCCGTCATTGTCATGCCGTTGGCCACACCCCAGATTAAA
GTGAATGCGGTCCGACGATTTGGAGGACCTACGGTGACGGTGAAGTTGCA
CGGAAAGAACTACGATGAAGCGTCGGAGGAAGCATTGCGGTTGGCAAGGG
AGGAGGGCTTGACGATGATCCATCCTTTTGATGACCCCGACGTTATTGCG
GGGCAAGGCACAATAGGCATGGAGATCTTGAAAGCTACAAACGGGCAGCC
ATTAGATGCCATCTTTGTGTGCGTGGGTGGTGGGGGTTTGCTTTCTGGAA
TAGCTTCCTATGTCAAGGCGGTGCGGCCGTCAGTAAAAGTGATTGGGGTC
GAGGCGGAGGACGCTGCGGGCATGACTACCTCTTTGGAGGCGGGTCACGT
TATAACCTTGGATAGAGTCGGGTTGTTTGCCGACGGGGCAGCAGTACGGG
TTGTGGGGAAGGAAACGTTTCGCGTGTGTAGTCAGTTGGTAGATGAGATG
GTGACAGTGACAACGGACGAGATCTGCGCAGCGATCAAGGCGGGGTTTCA
GGACACGCGCAGTGTGTTGGAGCCGGCAGGGGCGCTGGCGATAGCTGGGG
CAAAGAAATATTGCGCGGCGGAACAGTGGAGAGACAAGACGATCGTGGCG
ATTGCCTCGGGCGCGAACATGGACTTCGACCGGTTGCGGTTTGTGAGTGA
ACGGTCGGATTCGACTGAGTCGCTGCTTTCGGTGAGAATAAGTGAGCGGC
CCGGGAGCTTCAGACAATTGTACACGGGAATTTTCCCAAGAAATGTGACA
GAGTTTTCATACCGATTCAATAGTCCGGATACGGCTGATGTGATCATCAG
CTTTCAATCCATGCCTAACATGAATCGGGAGGAAGATAAGCAGCAGGTGC
TGGAAAACATTCGTCACCTCGGTACGTCTTTATGTCTGCAGAGTCGTTTG
ATGTGGTTTCCGACCTTATATTTGTTGAGTGTACCTCTCCATTCCCTCTC
ATCTCCAACAACCCACGTACACACAGAGTTCGAGGTCGTCGACCTGAGCG
CCAACGAAATGGCCAAGGCTCACGCCCGATACCTCGCTGGCGGGCGGGCC
CCACACGTCAAAAATGAGCAGCTTTATCGATTTGAGTTCCCCGAGCGACC
AGGTGCTTTGCATGCCTTCTTGACGGACCTGAGCAAGGGTTGGAACGTCA
GTCTCTTCCATTACCGTAACCAGGGCGGGGACATTGGTCGTGTCCTTGTT
GGGCTGCAGGTTCCCCCTGAGGAATTTGCAGAGTTTCAGAAGTGGTTGGA
AACATTGTCGCATTTGGGCTACGTCTATTTCGCTGAGACGAAGAATCCTG
TTTATTTTCAATTTCTGTACTGAATGCTGGGCGGAGGTAGGTGGCGGCGG
ATGACACGACTACCAGCCTCATTGCTGATGCAGCGTGCGGCCGCCAGCAG
TAGCGGGGCCTCGGTTGCAATTACGGGAAGTAGCGCGACGGAGGATTTCA
ACCGCGACCACACGGACTACTTGGCCCGTATCCTTAATGCCCGTGTCTAC
GAGATTGCCATCGAGACGCCCTTACAACCAGCGCCCTGCATGTCCAAGGC
GATTCATAACAATGTGTTGCTAAAGAGAGAAGATTTGCAGCCCGTCTTCT
CTTTCAAGCTTCGAGGTGCTTATAATAAAATCGTCAGCACGCCTGCCGCA
GACCTGGAACGGGGCGTCGTGGCCTGCTCGGCAGGCAACCACGCCCAAGG
CGTTGCACTCTCCGCTTCGCGCAAAAATATCAAGGCCGTCATTGTCATGC
CGTTGGCCACACCCCAGATTAAAGTGAATGCGGTCCGACGATTTGGAGGA
CCTACGGTGACGGTGAAGTTGCACGGAAAGAACTACGATGAAGCGTCGGA
GGAAGCATTGCGGTTGGCAAGGGAGGAGGGCTTGACGATGATCCATCCTT
TTGATGACCCCGACGTTATTGCGGGGCAAGGCACAATAGGCATGGAGATC
TTGAAAGCTACAAACGGGCAGCCATTAGATGCCATCTTTGTGTGCGTGGG
TGGTGGGGGTTTGCTTTCTGGAATAGCTTCCTATGTCAAGGCGGTGCGGC
CGTCAGTAAAAGTGATTGGGGTCGAGGCGGAGGACGCTGCGGGCATGACT
ACCTCTTTGGAGGCGGGTCACGTTATAACCTTGGATAGAGTCGGGTTGTT
TGCCGACGGGGCAGCAGTACGGGTTGTGGGGAAGGAAACGTTTCGCGTGT
GTAGTCAGTTGGTAGATGAGATGGTGACAGTGACAACGGACGAGATCTGC
GCAGCGATCAAGGCGGGGTTTCAGGACACGCGCAGTGTGTTGGAGCCGGC
AGGGGCGCTGGCGATAGCTGGGGCAAAGAAATATTGCGCGGCGGAACAGT
GGAGAGACAAGACGATCGTGGCGATTGCCTCGGGCGCGAACATGGACTTC
GACCGGTTGCGGTTTGTGAGTGAACGGTCGGATTCGACTGAGTCGCTGCT
TTCGGTGAGAATAAGTGAGCGGCCCGGGAGCTTCAGACAATTGTACACGG
GAATTTTCCCAAGAAATGTGACAGAGTTTTCATACCGATTCAATAGTCCG
GATACGGCTGATGTGATCATCAGCTTTCAATCCATGCCTAACATGAATCG
GGAGGAAGATAAGCAGCAGGTGCTGGAAAACATTCGTCACCTCGGTACGT
CTTTATGTCTGCAGAGTCGTTTGATGTGGTTTCCGACCTTATATTTGTTG
AGTGTACCTCTCCATTCCCTCTCATCTCCAACAACCCACGTACACACAGA
GTTCGAGGTCGTCGACCTGAGCGCCAACGAAATGGCCAAGGCTCACGCCC
GATACCTCGCTGGCGGGCGGGCCCCACACGTCAAAAATGAGCAGCTTTAT
CGATTTGAGTTCCCCGAGCGACCAGGTGCTTTGCATGCCTTCTTGACGGA
CCTGAGCAAGGGTTGGAACGTCAGTCTCTTCCATTACCGTAACCAGGGCG
GGGACATTGGTCGTGTCCTTGTTGGGCTGCAGGTTCCCCCTGAGGAATTT
GCAGAGTTTCAGAAGTGGTTGGAAACATTGTCGCATTTGGGCTACGTCTA
TTTCGCTGAGACGAAGAATCCTGTTTATTTTCAATTTCTGTACTGA back to top
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