jgi.p|Nanoce1779_2|540045, mRNA_3056 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|540045
Unique Name	mRNA_3056
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5158
Alignment location	scaffold_7:560796..566201 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	540131
Track	FilteredModels2
ProteinId	540045

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:560796..566201 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|540045	gene_3056	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|540045	mRNA_3056-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3056	CDS_3056	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_7:560796..566201+
coding sequence from alignment at scaffold_7:560796..566201+

mRNA sequence

>mRNA_3056 ID=mRNA_3056|Name=jgi.p|Nanoce1779_2|540045|organism=Nannochloropsis oceanica|type=mRNA|length=5158bp
GATTGCTGTTGCTTCTTTTTTGGAACAGTCTCTCCAAGTTTCTGGAACAC
AACACTAACAATACTAAACAGGCACCATTTTTGGATTCCGATTTCTGACT
TGTCGGTCAACAACTTTTGCCTCTTTCGTCTCGCTTTGAGTAGATGTGGC
CTGCGCTCCAAACGCGCTCGCGTGCCATATGTTTTATCAAATGATCCGTC
TGCGATCTCTCACACGTCTCTTACCACCTCACATTTCCCCCCCCTATACA
CTAAGCACGCAACAACAAAATGCTGAAGCGAGGAGGTCTGATGAACAGGT
GTGCAGGCGCCCTGGTGGTACTGCTGGCAGCGACGCTGCGCGTGGAGGGC
TTTATTCCGCATTTAGGCAAGGCCGCCGGATCCCGACCCGTGGTGCAACA
GCAGCAGTTGCAGCAGCAGCAGCAGCATCAAAGTGGCGCATCTCCCTTCT
GTGCGGGTGCCAGCCCCTTGTGGATGAGCGCGACTACTACCGAGGCTCCC
GCTAAGGCAGAGGGTGAGACTTTCGAATTTCAGGCGGAGGTGGCCCGCGT
GATGGACATCATCATCAACTCCCTGTACTCAGACCGAGACGTTTTTTTGC
GGGAGCTGGTCTCGAACGCCGCGGACGCTTGCGACAAGAAGCGCTTCCTC
TCCATAACCGAGGAGGGGGAGGCGACCGCGGCGGCTGAATTTGGCATTCG
TCTGAAGCCTGACCGGGCGGCCCGCACGCTGACTATTGAGGACTCCGGAA
TCGGGATGACCAAGACGGAGCTCGTGGAGAACTTGGGCCGCATCGCCCAG
TCGGGCACCAAGAAATTTGCCGAGGCTCTGGCTAAGGGCGATGCAGATTT
GAGCTTGATTGGTCAATTTGGCGTGGGTTTTTACTCCGGATTCTTGGCCG
CGGATCGTATGACAGTGGTGACGAGGCCTTTCCAGGGAGAGGACAAGCGA
CAGTACCGGTGGGAGTCGTCGGCTGGGTCTAGTTTTACCGTGTCGGAGGA
CGCGGACGGCGAGCCTATTGAGGGATCGGGTACGCGTATAATTCTGCACT
TGAAGGAGGATTGCGAGGAGTACCTCGACACAGTCAAGCTCAAGACGCTG
TTGCAGCGTTACAGTGAATTTGTCCAATTTCCTATCGAACTCTTTACCGA
GAAGACGGAGTACGACCAGGTTCCTGACGACACTGCCCCTCCACCGGCCG
AGGGCGAGAAGCCGAAAATGAAGACGGTGTCCAAGAAGACGAATGTCTGG
GAGAGGATCAATCAGACGAAGCCCATTTGGCTCCGATCTCCCAAGCAGGT
AACGGTGGATGAATACCAGGAGTTTTATCGTACTACGTTCCGTATGTTCG
ACGAGCCGCTGAACTATACCCACTTCTCGCTAGAGGGACAGGTAGAGTTC
AAGGCTGTGCTCTATGTCCCTTCTGTCTTGCCTTATGAGTTGAGCCGAAG
CATGTTCGATGAGAATTCGCGGGCGGTCAAGCTGTATGTGAAGCGAGTTT
TTATCAACGATAAGTTTGAAGAACTCCTTCCTCGGTACCTTACTTTCTTG
CGTGGTGTGGTGGACTCGGAGGACTTACCCCTGAATGTAGGGCGTGAGAT
TTTGCAGAAATCCAAGATGCTGAATGTGATTAATAAGAGGCTGGTGCGAA
AGTCCCTGGATATGTTCAAGGAGATAGAGAAGAACGCCACGGCCTACACC
ACGTTCTGGAATGGCTTTGGACGGTACCTGAAAGTTGGTCTTATTGAAGA
TAATGATAATAGACAGGAGCTTGCAAAATTGTCTCGGTGGACGACGACGG
AGACGGGGGATGATGTGGCGTCGTTTGACGAGTATGTTGCACGAATGAAG
CCCGACCAAAAGCAGATTTTTTACGTGACAGGCGAGACGAAGAAGCGGGC
ATTGGCCTCTCCTGCGCTAGAGAAGCTGAGGAAGCAGGGGTTCGAAGTTA
TCATTCTGCAAGATCCGTTGGATGAAATGTCGATGCAGTCTTTGGGGAAG
TACGCGGAAAAGGATATCGTGGATGCGGGGAAGGAGCAACAAGCCGAGAC
GGACGAGGAGAAGGCTTTTTTGGAGGAGAAAGGGACAGAGATGCAGGGTC
TGCGGGATTGGTATCGCAAGTTGTTGGGCAAGCGTGTGACTAAGGTGGAT
GTCACAAATCGATTGATTGATTCCCCGGCGGCTCTGGTACAGAGTGCGTA
TGGCATGTCCCCGCAGATGCAGAAGTACTACCGGGCACAGTCTGTGATGC
AAGGCGAGGAGGATGCCGGTGCCATGGACTCGCAGTTCAACCAAGCCATT
TTAGAGTTGAACCCTACCCATCCAATTGTGCTTTCGCTGCGTGATATGGT
CGCTGAGTCGCCGGAAGCGCTGGAGACGATGGAATTGGGGAGGTTGGTTT
ACGATGTGGCAGCGGTGGCGGGTGGGTATGACGTTGAGGACCCAGGTGCC
TTTACAGCGCGCATCACCAAGCTCATGTCTCGGCAGGTTCTGGCAGATGG
TGGGGAGGGGTTGGTGGCTGACGGCTTGTCTACTCGTGATATGGAGGACC
CGACCAAGCTGGAGGCGGACGTTGTAGGCGGTGGAGGCATGCCGGAGGGG
TTCAACTTTGATGACCTGCAAAATGAGCTCAAGGATGCTGCCGATGATGT
TGTGGATGAATCGATCTAAGCAAGAAGGAGGAGGATAAACAAATGAGCGC
ATTTGATTTGGTACAATTTTGAGAGGAATGTGAGAGAAAGCAGGGAGTGG
TGGGGGGATCACGAACACGGGAGAGCGTTAAAACCCTGAAGTCCCACTTT
GTGGAAGAGAGCCATAACAATGATGACGATATAACCCAAAAAATCTAGAC
ATATAACGTGAGACTACAAAAGAAGGAAAGATGAGAACCGTGGACACAAA
ATACGTTGGGGCGTATTCTTTTGGTTATCTCAGATTGTCAAGACTCAAGG
CCGGGTCAGCAAAGTCCCGGAAGAGGAAAAAATACTACACGTAAATCAAG
AGGCCGCATCGTTGCTCACTGAACAAACCAGCTTTGTCGTGTCCAGCCAA
CTCCAACCTGTCAGCAGCGGCATCAGCAACATCATCAGTCCTTGCAAGGG
GAATGCTGGGCGGAGGTAGGTGGCGGCGGATGACACGACTACCAGCCTCA
TTGCTGATGCAGCGTGCGGCCGCCAGCAGTAGCGGGGCCTCGGTTGCAAT
TACGGGAAGTAGCGCGACGGAGGATTTCAACCGCGACCACACGGACTACT
TGGCCCGTATCCTTAATGCCCGTGTCTACGAGATTGCCATCGAGACGCCC
TTACAACCAGCGCCCTGCATGTCCAAGGCGATTCATAACAATGTGTTGCT
AAAGAGAGAAGATTTGCAGCCCGTCTTCTCTTTCAAGCTTCGAGGTGCTT
ATAATAAAATCGTCAGCACGCCTGCCGCAGACCTGGAACGGGGCGTCGTG
GCCTGCTCGGCAGGCAACCACGCCCAAGGCGTTGCACTCTCCGCTTCGCG
CAAAAATATCAAGGCCGTCATTGTCATGCCGTTGGCCACACCCCAGATTA
AAGTGAATGCGGTCCGACGATTTGGAGGACCTACGGTGACGGTGAAGTTG
CACGGAAAGAACTACGATGAAGCGTCGGAGGAAGCATTGCGGTTGGCAAG
GGAGGAGGGCTTGACGATGATCCATCCTTTTGATGACCCCGACGTTATTG
CGGGGCAAGGCACAATAGGCATGGAGATCTTGAAAGCTACAAACGGGCAG
CCATTAGATGCCATCTTTGTGTGCGTGGGTGGTGGGGGTTTGCTTTCTGG
AATAGCTTCCTATGTCAAGGCGGTGCGGCCGTCAGTAAAAGTGATTGGGG
TCGAGGCGGAGGACGCTGCGGGCATGACTACCTCTTTGGAGGCGGGTCAC
GTTATAACCTTGGATAGAGTCGGGTTGTTTGCCGACGGGGCAGCAGTACG
GGTTGTGGGGAAGGAAACGTTTCGCGTGTGTAGTCAGTTGGTAGATGAGA
TGGTGACAGTGACAACGGACGAGATCTGCGCAGCGATCAAGGCGGGGTTT
CAGGACACGCGCAGTGTGTTGGAGCCGGCAGGGGCGCTGGCGATAGCTGG
GGCAAAGAAATATTGCGCGGCGGAACAGTGGAGAGACAAGACGATCGTGG
CGATTGCCTCGGGCGCGAACATGGACTTCGACCGGTTGCGGTTTGTGAGT
GAACGGTCGGATTCGACTGAGTCGCTGCTTTCGGTGAGAATAAGTGAGCG
GCCCGGGAGCTTCAGACAATTGTACACGGGAATTTTCCCAAGAAATGTGA
CAGAGTTTTCATACCGATTCAATAGTCCGGATACGGCTGATGTGATCATC
AGCTTTCAATCCATGCCTAACATGAATCGGGAGGAAGATAAGCAGCAGGT
GCTGGAAAACATTCGTCACCTCGGTACGTCTTTATGTCTGCAGAGTCGTT
TGATGTGGTTTCCGACCTTATATTTGTTGAGTGTACCTCTCCATTCCCTC
TCATCTCCAACAACCCACGTACACACAGAGTTCGAGGTCGTCGACCTGAG
CGCCAACGAAATGGCCAAGGCTCACGCCCGATACCTCGCTGGCGGGCGGG
CCCCACACGTCAAAAATGAGCAGCTTTATCGATTTGAGTTCCCCGAGCGA
CCAGGTGCTTTGCATGCCTTCTTGACGGACCTGAGCAAGGGTTGGAACGT
CAGTCTCTTCCATTACCGTAACCAGGGCGGGGACATTGGTCGTGTCCTTG
TTGGGCTGCAGGTTCCCCCTGAGGAATTTGCAGAGTTTCAGAAGTGGTTG
GAAACATTGTCGCATTTGGGCTACGTCTATTTCGCTGAGACGAAGAATCC
TGTTTATTTTCAATTTCTGTACTGACCAGAGACGAGGTGAGAAGAGACGG
AAGGAGAGGAGAGGGGGGCTGCGTGATGCATGTGTGGCTGCATTTAGAAT
TGACTGGACCCTAACTGTGTGCCGCATGTTTCTAGGATGTAGGATAAGTT
CCTTGCCTTTTTAAAGAGCACAATAAGATTTCTATTTCAATTAAAAAAGA
AAAAAGAAAAAAGAATGACCTATGCGGGGGAATATTGCGGGGGGCAAGGT
CACGAATAATTCCCCACTTTGGTGATCTCAGGACGCTTGACTTCACTAAT
CACATCAT

protein sequence of jgi.p|Nanoce1779_2|540045

>mRNA_3056-protein ID=mRNA_3056-protein|Name=jgi.p|Nanoce1779_2|540045|organism=Nannochloropsis oceanica|type=polypeptide|length=800bp
MLKRGGLMNRCAGALVVLLAATLRVEGFIPHLGKAAGSRPVVQQQQLQQQ
QQHQSGASPFCAGASPLWMSATTTEAPAKAEGETFEFQAEVARVMDIIIN
SLYSDRDVFLRELVSNAADACDKKRFLSITEEGEATAAAEFGIRLKPDRA
ARTLTIEDSGIGMTKTELVENLGRIAQSGTKKFAEALAKGDADLSLIGQF
GVGFYSGFLAADRMTVVTRPFQGEDKRQYRWESSAGSSFTVSEDADGEPI
EGSGTRIILHLKEDCEEYLDTVKLKTLLQRYSEFVQFPIELFTEKTEYDQ
VPDDTAPPPAEGEKPKMKTVSKKTNVWERINQTKPIWLRSPKQVTVDEYQ
EFYRTTFRMFDEPLNYTHFSLEGQVEFKAVLYVPSVLPYELSRSMFDENS
RAVKLYVKRVFINDKFEELLPRYLTFLRGVVDSEDLPLNVGREILQKSKM
LNVINKRLVRKSLDMFKEIEKNATAYTTFWNGFGRYLKVGLIEDNDNRQE
LAKLSRWTTTETGDDVASFDEYVARMKPDQKQIFYVTGETKKRALASPAL
EKLRKQGFEVIILQDPLDEMSMQSLGKYAEKDIVDAGKEQQAETDEEKAF
LEEKGTEMQGLRDWYRKLLGKRVTKVDVTNRLIDSPAALVQSAYGMSPQM
QKYYRAQSVMQGEEDAGAMDSQFNQAILELNPTHPIVLSLRDMVAESPEA
LETMELGRLVYDVAAVAGGYDVEDPGAFTARITKLMSRQVLADGGEGLVA
DGLSTRDMEDPTKLEADVVGGGGMPEGFNFDDLQNELKDAADDVVDESI*

mRNA from alignment at scaffold_7:560796..566201+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3056 ID=mRNA_3056|Name=jgi.p|Nanoce1779_2|540045|organism=Nannochloropsis oceanica|type=mRNA|length=5406bp|location=Sequence derived from alignment at scaffold_7:560796..566201+ (Nannochloropsis oceanica)
GATTGCTGTTGCTTCTTTTTTGGAACAGTCTCTCCAAGTTTCTGGAACAC
AACACTAACAATACTAAACAGGCACCATTTTTGGATTCCGATTTCTGACT
TGTCGGTCAACAACTTTTGCCTCTTTCGTCTCGCTTTGAGTAGATGTGGC
CTGCGCTCCAAACGCGCTCGCGTGCCATATGTTTTATCAAATGATCCGTC
TGCGATCTCTCACACGTCTCTTACCACCTCACATTTCCCCCCCCTATACA
CTAAGCACGCAACAACAAAATGCTGAAGCGAGGAGGTCTGATGAACAGGT
GTGCAGGCGCCCTGGTGGTACTGCTGGCAGCGACGCTGCGCGTGGAGGGC
TTTATTCCGCATTTAGGCAAGGCCGCCGGATCCCGACCCGTGGTGCAACA
GCAGCAGTTGCAGCAGCAGCAGCAGCATCAAAGTGGCGCATCTCCCTTCT
GTGCGGGTGCCAGCCCCTTGTGGATGAGCGCGACTACTACCGAGGCTCCC
GCTAAGGCAGAGGGTGAGACTTTCGAATTTCAGGCGGAGGTGGCCCGCGT
GATGGACATCATCATCAACTCCCTGTACTCAGACCGAGACGTTTTTTTGC
GGGAGCTGGTCTCGAACGCCGCGGACGCTTGCGACAAGAAGCGCTTCCTC
TCCATAACCGAGGAGGGGGAGGCGACCGCGGCGGCTGAATTTGGCATTCG
TCTGAAGCCTGACCGGGCGGCCCGCACGCTGACTATTGAGGACTCCGGAA
TCGGGATGACCAAGACGGAGCTCGTGGAGAACTTGGGCCGCATCGCCCAG
TCGGGCACCAAGAAATTTGCCGAGGCTCTGGCTAAGGGCGATGCAGATTT
GAGCTTGATTGGTCAATTTGGCGTGGGTTTTTACTCCGGATTCTTGGCCG
CGGATCGTATGACAGTGGTGACGAGGCCTTTCCAGGGAGAGGACAAGCGA
CAGTACCGGTGGGAGTCGTCGGCTGGGTCTAGTTTTACCGTGTCGGAGGA
CGCGGACGGCGAGCCTATTGAGGGATCGGGTACGCGTATAATTCTGCACT
TGAAGGAGGATTGCGAGGAGTACCTCGACACAGTCAAGCTCAAGACGCTG
TTGCAGCGTTACAGTGAATTTGTCCAATTTCCTATCGAACTCTTTACCGA
GAAGACGGAGTACGACCAGGTTCCTGACGACACTGCCCCTCCACCGGCCG
AGGGCGAGAAGCCGAAAATGAAGACGGTGTCCAAGAAGACGAATGTCTGG
GAGAGGATCAATCAGACGAAGCCCATTTGGCTCCGATCTCCCAAGCAGGT
AACGGTGGATGAATACCAGGAGTTTTATCGTACTACGTTCCGTATGTTCG
ACGAGCCGCTGAACTATACCCACTTCTCGCTAGAGGGACAGGTAGAGTTC
AAGGCTGTGCTCTATGTCCCTTCTGTCTTGCCTTATGAGTTGAGCCGAAG
CATGTTCGATGAGAATTCGCGGGCGGTCAAGCTGTATGTGAAGCGAGTTT
TTATCAACGATAAGTTTGAAGAACTCCTTCCTCGGTACCTTACTTTCTTG
CGTGGTGTGGTGGACTCGGAGGACTTACCCCTGAATGTAGGGCGTGAGAT
TTTGCAGAAATCCAAGATGCTGAATGTGATTAATAAGAGGCTGGTGCGAA
AGTCCCTGGATATGTTCAAGGAGATAGAGAAGAACGCCACGGCCTACACC
ACGTTCTGGAATGGCTTTGGACGGTACCTGAAAGTTGGTCTTATTGAAGA
TAATGATAATAGACAGGAGCTTGCAAAATTGTCTCGGTGGACGACGACGG
AGACGGGGGATGATGTGGCGTCGTTTGACGAGTATGTTGCACGAATGAAG
CCCGACCAAAAGCAGATTTTTTACGTGACAGGCGAGACGAAGAAGCGGGC
ATTGGCCTCTCCTGCGCTAGAGAAGCTGAGGAAGCAGGGGTTCGAAGTTA
TCATTCTGCAAGATCCGTTGGATGAAATGTCGATGCAGTCTTTGGGGAAG
TACGCGGAAAAGGATATCGTGGATGCGGGGAAGGAGCAACAAGCCGAGAC
GGACGAGGAGAAGGCTTTTTTGGAGGAGAAAGGGACAGAGATGCAGGGTC
TGCGGGATTGGTATCGCAAGTTGTTGGGCAAGCGTGTGACTAAGGTGGAT
GTCACAAATCGATTGATTGATTCCCCGGCGGCTCTGGTACAGAGTGCGTA
TGGCATGTCCCCGCAGATGCAGAAGTACTACCGGGCACAGTCTGTGATGC
AAGGCGAGGAGGATGCCGGTGCCATGGACTCGCAGTTCAACCAAGCCATT
TTAGAGTTGAACCCTACCCATCCAATTGTGCTTTCGCTGCGTGATATGGT
CGCTGAGTCGCCGGAAGCGCTGGAGACGATGGAATTGGGGAGGTTGGTTT
ACGATGTGGCAGCGGTGGCGGGTGGGTATGACGTTGAGGACCCAGGTGCC
TTTACAGCGCGCATCACCAAGCTCATGTCTCGGCAGGTTCTGGCAGATGG
TGGGGAGGGGTTGGTGGCTGACGGCTTGTCTACTCGTGATATGGAGGACC
CGACCAAGCTGGAGGCGGACGTTGTAGGCGGTGGAGGCATGCCGGAGGGG
TTCAACTTTGATGACCTGCAAAATGAGCTCAAGGATGCTGCCGATGATGT
TGTGGATGAATCGATCTAAGCAAGAAGGAGGAGGATAAACAAATGAGCGC
ATTTGATTTGGTACAATTTTGAGAGGAATGTGAGAGAAAGCAGGGAGTGG
TGGGGGGATCACGAACACGGGAGAGCGTTAAAACCCTGAAGTCCCACTTT
GTGGAAGAGAGCCATAACAATGATGACGATATAACCCAAAAAATCTAGAC
ATATAACGTGAGACTACAAAAGAAGGAAAGATGAGAACCGTGGACACAAA
ATACGTTGGGGCGTATTCTTTTGGTTATCTCAGATTGTCAAGACTCAAGG
CCGGGTCAGCAAAGTCCCGGGTACGTCCCTCCACTTCCACTCGCCAGCGT
GTGCTGATTGAAGTGGATATTTCTGGGCAATCAACCCCTCTGTCCACTCG
CGTATGCTCGCTCACGGTCCATCCACCCACCTATACAGAAGAGGAAAAAA
TACTACACGTAAATCAAGAGGCCGCATCGTTGCTCACTGAACAAACCAGC
TTTGTCGTGTCCAGCCAACTCCAACCTGTCAGCAGCGGCATCAGCAACAT
CATCAGTCCTTGCAAGGGGAATGCTGGGCGGAGGTAGGTGGCGGCGGATG
ACACGACTACCAGCCTCATTGCTGATGCAGCGTGCGGCCGCCAGCAGTAG
CGGGGCCTCGGTTGCAATTACGGGAAGTAGCGCGACGGAGGATTTCAACC
GCGACCACACGGACTACTTGGCCCGTATCCTTAATGCCCGTGTCTACGAG
ATTGCCATCGAGACGCCCTTACAACCAGCGCCCTGCATGTCCAAGGCGAT
TCATAACAATGTGTTGCTAAAGGTATGCGGAATTGATGCGAGATCGTGTC
CTCTTAGACTTATCTTGATGGCGTATCATCGCGCATAACCTGTCTTTCTC
TCTCACAGCCGCACATCACATAAACTCGCACGCTCTCCCAATCCCTACAC
AGAGAGAAGATTTGCAGCCCGTCTTCTCTTTCAAGCTTCGAGGTGCTTAT
AATAAAATCGTCAGCACGCCTGCCGCAGACCTGGAACGGGGCGTCGTGGC
CTGCTCGGCAGGCAACCACGCCCAAGGCGTTGCACTCTCCGCTTCGCGCA
AAAATATCAAGGCCGTCATTGTCATGCCGTTGGCCACACCCCAGATTAAA
GTGAATGCGGTCCGACGATTTGGAGGACCTACGGTGACGGTGAAGTTGCA
CGGAAAGAACTACGATGAAGCGTCGGAGGAAGCATTGCGGTTGGCAAGGG
AGGAGGGCTTGACGATGATCCATCCTTTTGATGACCCCGACGTTATTGCG
GGGCAAGGCACAATAGGCATGGAGATCTTGAAAGCTACAAACGGGCAGCC
ATTAGATGCCATCTTTGTGTGCGTGGGTGGTGGGGGTTTGCTTTCTGGAA
TAGCTTCCTATGTCAAGGCGGTGCGGCCGTCAGTAAAAGTGATTGGGGTC
GAGGCGGAGGACGCTGCGGGCATGACTACCTCTTTGGAGGCGGGTCACGT
TATAACCTTGGATAGAGTCGGGTTGTTTGCCGACGGGGCAGCAGTACGGG
TTGTGGGGAAGGAAACGTTTCGCGTGTGTAGTCAGTTGGTAGATGAGATG
GTGACAGTGACAACGGACGAGATCTGCGCAGCGATCAAGGCGGGGTTTCA
GGACACGCGCAGTGTGTTGGAGCCGGCAGGGGCGCTGGCGATAGCTGGGG
CAAAGAAATATTGCGCGGCGGAACAGTGGAGAGACAAGACGATCGTGGCG
ATTGCCTCGGGCGCGAACATGGACTTCGACCGGTTGCGGTTTGTGAGTGA
ACGGTCGGATTCGACTGAGTCGCTGCTTTCGGTGAGAATAAGTGAGCGGC
CCGGGAGCTTCAGACAATTGTACACGGGAATTTTCCCAAGAAATGTGACA
GAGTTTTCATACCGATTCAATAGTCCGGATACGGCTGATGTGATCATCAG
CTTTCAATCCATGCCTAACATGAATCGGGAGGAAGATAAGCAGCAGGTGC
TGGAAAACATTCGTCACCTCGGTACGTCTTTATGTCTGCAGAGTCGTTTG
ATGTGGTTTCCGACCTTATATTTGTTGAGTGTACCTCTCCATTCCCTCTC
ATCTCCAACAACCCACGTACACACAGAGTTCGAGGTCGTCGACCTGAGCG
CCAACGAAATGGCCAAGGCTCACGCCCGATACCTCGCTGGCGGGCGGGCC
CCACACGTCAAAAATGAGCAGCTTTATCGATTTGAGTTCCCCGAGCGACC
AGGTGCTTTGCATGCCTTCTTGACGGACCTGAGCAAGGGTTGGAACGTCA
GTCTCTTCCATTACCGTAACCAGGGCGGGGACATTGGTCGTGTCCTTGTT
GGGCTGCAGGTTCCCCCTGAGGAATTTGCAGAGTTTCAGAAGTGGTTGGA
AACATTGTCGCATTTGGGCTACGTCTATTTCGCTGAGACGAAGAATCCTG
TTTATTTTCAATTTCTGTACTGACCAGAGACGAGGTGAGAAGAGACGGAA
GGAGAGGAGAGGGGGGCTGCGTGATGCATGTGTGGCTGCATTTAGAATTG
ACTGGACCCTAACTGTGTGCCGCATGTTTCTAGGATGTAGGATAAGTTCC
TTGCCTTTTTAAAGAGCACAATAAGATTTCTATTTCAATTAAAAAAGAAA
AAAGAAAAAAGAATGACCTATGCGGGGGAATATTGCGGGGGGCAAGGTCA
CGAATAATTCCCCACTTTGGTGATCTCAGGACGCTTGACTTCACTAATCA
CATCAT

Coding sequence (CDS) from alignment at scaffold_7:560796..566201+

>mRNA_3056 ID=mRNA_3056|Name=jgi.p|Nanoce1779_2|540045|organism=Nannochloropsis oceanica|type=CDS|length=2400bp|location=Sequence derived from alignment at scaffold_7:560796..566201+ (Nannochloropsis oceanica)
ATGCTGAAGCGAGGAGGTCTGATGAACAGGTGTGCAGGCGCCCTGGTGGT
ACTGCTGGCAGCGACGCTGCGCGTGGAGGGCTTTATTCCGCATTTAGGCA
AGGCCGCCGGATCCCGACCCGTGGTGCAACAGCAGCAGTTGCAGCAGCAG
CAGCAGCATCAAAGTGGCGCATCTCCCTTCTGTGCGGGTGCCAGCCCCTT
GTGGATGAGCGCGACTACTACCGAGGCTCCCGCTAAGGCAGAGGGTGAGA
CTTTCGAATTTCAGGCGGAGGTGGCCCGCGTGATGGACATCATCATCAAC
TCCCTGTACTCAGACCGAGACGTTTTTTTGCGGGAGCTGGTCTCGAACGC
CGCGGACGCTTGCGACAAGAAGCGCTTCCTCTCCATAACCGAGGAGGGGG
AGGCGACCGCGGCGGCTGAATTTGGCATTCGTCTGAAGCCTGACCGGGCG
GCCCGCACGCTGACTATTGAGGACTCCGGAATCGGGATGACCAAGACGGA
GCTCGTGGAGAACTTGGGCCGCATCGCCCAGTCGGGCACCAAGAAATTTG
CCGAGGCTCTGGCTAAGGGCGATGCAGATTTGAGCTTGATTGGTCAATTT
GGCGTGGGTTTTTACTCCGGATTCTTGGCCGCGGATCGTATGACAGTGGT
GACGAGGCCTTTCCAGGGAGAGGACAAGCGACAGTACCGGTGGGAGTCGT
CGGCTGGGTCTAGTTTTACCGTGTCGGAGGACGCGGACGGCGAGCCTATT
GAGGGATCGGGTACGCGTATAATTCTGCACTTGAAGGAGGATTGCGAGGA
GTACCTCGACACAGTCAAGCTCAAGACGCTGTTGCAGCGTTACAGTGAAT
TTGTCCAATTTCCTATCGAACTCTTTACCGAGAAGACGGAGTACGACCAG
GTTCCTGACGACACTGCCCCTCCACCGGCCGAGGGCGAGAAGCCGAAAAT
GAAGACGGTGTCCAAGAAGACGAATGTCTGGGAGAGGATCAATCAGACGA
AGCCCATTTGGCTCCGATCTCCCAAGCAGGTAACGGTGGATGAATACCAG
GAGTTTTATCGTACTACGTTCCGTATGTTCGACGAGCCGCTGAACTATAC
CCACTTCTCGCTAGAGGGACAGGTAGAGTTCAAGGCTGTGCTCTATGTCC
CTTCTGTCTTGCCTTATGAGTTGAGCCGAAGCATGTTCGATGAGAATTCG
CGGGCGGTCAAGCTGTATGTGAAGCGAGTTTTTATCAACGATAAGTTTGA
AGAACTCCTTCCTCGGTACCTTACTTTCTTGCGTGGTGTGGTGGACTCGG
AGGACTTACCCCTGAATGTAGGGCGTGAGATTTTGCAGAAATCCAAGATG
CTGAATGTGATTAATAAGAGGCTGGTGCGAAAGTCCCTGGATATGTTCAA
GGAGATAGAGAAGAACGCCACGGCCTACACCACGTTCTGGAATGGCTTTG
GACGGTACCTGAAAGTTGGTCTTATTGAAGATAATGATAATAGACAGGAG
CTTGCAAAATTGTCTCGGTGGACGACGACGGAGACGGGGGATGATGTGGC
GTCGTTTGACGAGTATGTTGCACGAATGAAGCCCGACCAAAAGCAGATTT
TTTACGTGACAGGCGAGACGAAGAAGCGGGCATTGGCCTCTCCTGCGCTA
GAGAAGCTGAGGAAGCAGGGGTTCGAAGTTATCATTCTGCAAGATCCGTT
GGATGAAATGTCGATGCAGTCTTTGGGGAAGTACGCGGAAAAGGATATCG
TGGATGCGGGGAAGGAGCAACAAGCCGAGACGGACGAGGAGAAGGCTTTT
TTGGAGGAGAAAGGGACAGAGATGCAGGGTCTGCGGGATTGGTATCGCAA
GTTGTTGGGCAAGCGTGTGACTAAGGTGGATGTCACAAATCGATTGATTG
ATTCCCCGGCGGCTCTGGTACAGAGTGCGTATGGCATGTCCCCGCAGATG
CAGAAGTACTACCGGGCACAGTCTGTGATGCAAGGCGAGGAGGATGCCGG
TGCCATGGACTCGCAGTTCAACCAAGCCATTTTAGAGTTGAACCCTACCC
ATCCAATTGTGCTTTCGCTGCGTGATATGGTCGCTGAGTCGCCGGAAGCG
CTGGAGACGATGGAATTGGGGAGGTTGGTTTACGATGTGGCAGCGGTGGC
GGGTGGGTATGACGTTGAGGACCCAGGTGCCTTTACAGCGCGCATCACCA
AGCTCATGTCTCGGCAGGTTCTGGCAGATGGTGGGGAGGGGTTGGTGGCT
GACGGCTTGTCTACTCGTGATATGGAGGACCCGACCAAGCTGGAGGCGGA
CGTTGTAGGCGGTGGAGGCATGCCGGAGGGGTTCAACTTTGATGACCTGC
AAAATGAGCTCAAGGATGCTGCCGATGATGTTGTGGATGAATCGATCTAA

Synonyms

Publications