Properties
| Property Name | Value |
|---|
| TranscriptId | 584376 |
| Track | FilteredModels2 |
| ProteinId | 584290 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:508591..510273 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3035 ID=mRNA_3035|Name=jgi.p|Nanoce1779_2|584290|organism=Nannochloropsis oceanica|type=mRNA|length=1041bp
CCTTTTACGGGGGACACAAATTTCTCGGCATTACCTCAATACATGCAGAT
GAAGGTCTGGGAGTTGCACAAGCTGGTCAAGGAACACAGAGAGCATGCTG
AGACCGTCAACAAATTCAGCACCCAGAGCTACGCGCTGGATCAGCACACG
AAGAAACTGAAGCTGCACATTTTGCGAGTGCGGAATGCGCACGCTGAAAT
CTCACTGCTATCTGATGAGTTGCGCACGCAGGTTGAGCGTTTGCGCGGTT
TTATCCAGAAGCTCCAGGCGGCAGAGAACGGAGCTTTGCAGTACTCTATC
CCTCGGGCTGCCGGGATTGAACACTGGCAGCAGCGACAAGATAGCCATAC
CGACATTTTGCGAGAAATGGTGGGCCAATGCGAGGCGCGCCTGCAGGAAT
ACGGCGTCCACATCCAGGAGCTATACCGTAAGGTTGTGCCCAGCCGCGGC
ACCGGGGACGAGGCCCGAGAAGGGCGTGACGAGTTTTCCAGGCAAGTTAC
GCCGGATCAGCTGGCGACTCTTATCCGGCTTCAAAACGATGCACTCCTCA
AGGTAGCGGCCCAGGTGGCGGGCATGCACGAGATGGTGGAGCGGCTGAGA
AGTGAGTGGAACTCTCGCACGGGCCAAGACCCCTTCGAGGAATTGGATCG
CGTCAATGCCGAGAATGAGGAGCAGAAGCGCAAGATGACCCGCATGGTGA
TACGTTCTTCCCAGGAATCTCTAACACAAGAAAGCTTGACTTCCTTTCAG
GTCGGTAATTCTGCTTCCTTGATCCCGGCGTCTTTCGTCCAGCGTGCCTC
GGCCAACATTGCAGCTCCTTCTCCTTTTACTTACTCTATCGATGGGCCAA
CTACTGCTGTCGCGGGCACGGATACATTGACAACAAGTCCCCTTGGATAC
CCCGCGCCGGATTCTATCGACCGCACAGGACGATCCACGAAGGCCAAATC
CCGACGATGAGAGACGGCAGATAGAAGTCAGTTACATGCAAAGCCAGTGA
GGCATAGCAAAGAAAGTATGCAGCAGAATCAACATTGGCCA back to topprotein sequence of jgi.p|Nanoce1779_2|584290 >mRNA_3035-protein ID=mRNA_3035-protein|Name=jgi.p|Nanoce1779_2|584290|organism=Nannochloropsis oceanica|type=polypeptide|length=306bp
MQMKVWELHKLVKEHREHAETVNKFSTQSYALDQHTKKLKLHILRVRNAH
AEISLLSDELRTQVERLRGFIQKLQAAENGALQYSIPRAAGIEHWQQRQD
SHTDILREMVGQCEARLQEYGVHIQELYRKVVPSRGTGDEAREGRDEFSR
QVTPDQLATLIRLQNDALLKVAAQVAGMHEMVERLRSEWNSRTGQDPFEE
LDRVNAENEEQKRKMTRMVIRSSQESLTQESLTSFQVGNSASLIPASFVQ
RASANIAAPSPFTYSIDGPTTAVAGTDTLTTSPLGYPAPDSIDRTGRSTK
AKSRR* back to topmRNA from alignment at scaffold_7:508591..510273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3035 ID=mRNA_3035|Name=jgi.p|Nanoce1779_2|584290|organism=Nannochloropsis oceanica|type=mRNA|length=1683bp|location=Sequence derived from alignment at scaffold_7:508591..510273- (Nannochloropsis oceanica)
CCTTTTACGGGGGACACAAATTTCTCGGCATTACCTCAATACATGCAGAT
GAAGGTCTGGGAGTTGCACAAGCTGGTCAAGGAACACAGAGAGCATGCTG
AGACCGTCAACAAATTCAGCACCCAGAGCTACGCGCTGGATCAGCACACG
AAGGTAAGGTGAAGGAAGAGAAGTGCGTGAAAGAGCAGCTCACAAGAGGG
GGGACGAAGAGAGGAGAATAGAATGGCTTGGTGTACTGCTGAAAGCTTTC
GGCCGGTCGCGTTCAAACTAAGGCATATTTTTGCATGTTCATATTGTAGG
TTATGGACAGCTGTTTGTCTTCCTAAGTTTGTCTTTTAGATTGGTCTGTT
CAAAGGAAGACGTCTCAATTAAATTTTTCATCGCTAATTACTTTTTTTTT
CTCGTATTGTCATGGCTGCTCTCTTCCAATGCCCTCTCTCCCCCTTCCCA
CACACCCCTCTCTTGACAGAAACTGAAGCTGCACATTTTGCGAGTGCGGA
ATGCGCACGCTGAAATCTCACTGCTATCTGATGAGTTGCGCACGCAGGTT
GAGCGTTTGCGCGGTTTTATCCAGAAGCTCCAGGCGGCAGAGAACGGAGC
TTTGCAGTACTCTATCCCTCGGGCTGCCGGGATTGAACACTGGCAGCAGC
GACAAGATAGCCATACCGACATTTTGCGAGAAATGGTGGGCCAATGCGAG
GCGCGCCTGCAGGAATACGGCGTCCACATCCAGGAGCTATACCGTAAGGT
TGTGCCCAGCCGCGGCACCGGGGACGAGGCCCGAGAAGGGCGTGACGAGT
TTTCCAGGTAAAGGATAGACGGAATGAAAGCGGTGGGGCTGGTGATAATA
GGCCTCCCGAAATGGTGGTGCGACCTCACGAGGAAACGCGGCATTTTTTG
GTCACCTTCTCACACACGGACCCGCTTTTTATTTTCTGGTGCGGCCAACA
GGCAAGTTACGCCGGATCAGCTGGCGACTCTTATCCGGCTTCAAAACGAT
GCACTCCTCAAGGTAGCGGCCCAGGTGGCGGGCATGCACGAGATGGTGGA
GCGGCTGAGAAGTGAGTGGAACTCTCGCACGGGCCAAGACCCCTTCGAGG
TAAGAGCTGCACATGTCTAGTTAGAGGTCAGAAAGAAGGGAACGTGAAAC
CCCGATTACCTTCCCCACATCACCTTGACCTATACTTACCGTCAGGAATT
GGATCGCGTCAATGCCGAGAATGAGGAGCAGAAGCGCAAGATGACCCGCA
TGGTGATACGTTCTTCCCAGGAATCTCTAACACAAGAAAGCTTGACTTCC
TTTCAGGTCGGTAATTCTGCTTCCTTGATCCCGGCGTCTTTCGTCCAGCG
TGCCTCGGCCAACATTGCAGCTCCTTCTCCTTTTACTTACTCTATCGATG
GGCCAACTACGTAAGTGCTCATTAATTTGGCCTTATCACAGTCTTTCTTT
GATCGCTCACTCTCTCTCGCTGGACATTTGTAAATTATCATCGCAGTGCT
GTCGCGGGCACGGATACATTGACAACAAGTCCCCTTGGATACCCCGCGCC
GGATTCTATCGACCGCACAGGACGATCCACGAAGGCCAAATCCCGACGAT
GAGAGACGGCAGATAGAAGTCAGTTACATGCAAAGCCAGTGAGGCATAGC
AAAGAAAGTATGCAGCAGAATCAACATTGGCCA back to topCoding sequence (CDS) from alignment at scaffold_7:508591..510273- >mRNA_3035 ID=mRNA_3035|Name=jgi.p|Nanoce1779_2|584290|organism=Nannochloropsis oceanica|type=CDS|length=4590bp|location=Sequence derived from alignment at scaffold_7:508591..510273- (Nannochloropsis oceanica)
TGCTGTCGCGGGCACGGATACATTGACAACAAGTCCCCTTGGATACCCCG
CGCCGGATTCTATCGACCGCACAGGACGATCCACGAAGGCCAAATCCCGA
CGATGAGAATTGGATCGCGTCAATGCCGAGAATGAGGAGCAGAAGCGCAA
GATGACCCGCATGGTGATACGTTCTTCCCAGGAATCTCTAACACAAGAAA
GCTTGACTTCCTTTCAGGTCGGTAATTCTGCTTCCTTGATCCCGGCGTCT
TTCGTCCAGCGTGCCTCGGCCAACATTGCAGCTCCTTCTCCTTTTACTTA
CTCTATCGATGGGCCAACTACGCAAGTTACGCCGGATCAGCTGGCGACTC
TTATCCGGCTTCAAAACGATGCACTCCTCAAGGTAGCGGCCCAGGTGGCG
GGCATGCACGAGATGGTGGAGCGGCTGAGAAGTGAGTGGAACTCTCGCAC
GGGCCAAGACCCCTTCGAGAAACTGAAGCTGCACATTTTGCGAGTGCGGA
ATGCGCACGCTGAAATCTCACTGCTATCTGATGAGTTGCGCACGCAGGTT
GAGCGTTTGCGCGGTTTTATCCAGAAGCTCCAGGCGGCAGAGAACGGAGC
TTTGCAGTACTCTATCCCTCGGGCTGCCGGGATTGAACACTGGCAGCAGC
GACAAGATAGCCATACCGACATTTTGCGAGAAATGGTGGGCCAATGCGAG
GCGCGCCTGCAGGAATACGGCGTCCACATCCAGGAGCTATACCGTAAGGT
TGTGCCCAGCCGCGGCACCGGGGACGAGGCCCGAGAAGGGCGTGACGAGT
TTTCCAGATGCAGATGAAGGTCTGGGAGTTGCACAAGCTGGTCAAGGAAC
ACAGAGAGCATGCTGAGACCGTCAACAAATTCAGCACCCAGAGCTACGCG
CTGGATCAGCACACGAAGTGCTGTCGCGGGCACGGATACATTGACAACAA
GTCCCCTTGGATACCCCGCGCCGGATTCTATCGACCGCACAGGACGATCC
ACGAAGGCCAAATCCCGACGATGAGAATTGGATCGCGTCAATGCCGAGAA
TGAGGAGCAGAAGCGCAAGATGACCCGCATGGTGATACGTTCTTCCCAGG
AATCTCTAACACAAGAAAGCTTGACTTCCTTTCAGGTCGGTAATTCTGCT
TCCTTGATCCCGGCGTCTTTCGTCCAGCGTGCCTCGGCCAACATTGCAGC
TCCTTCTCCTTTTACTTACTCTATCGATGGGCCAACTACGCAAGTTACGC
CGGATCAGCTGGCGACTCTTATCCGGCTTCAAAACGATGCACTCCTCAAG
GTAGCGGCCCAGGTGGCGGGCATGCACGAGATGGTGGAGCGGCTGAGAAG
TGAGTGGAACTCTCGCACGGGCCAAGACCCCTTCGAGAAACTGAAGCTGC
ACATTTTGCGAGTGCGGAATGCGCACGCTGAAATCTCACTGCTATCTGAT
GAGTTGCGCACGCAGGTTGAGCGTTTGCGCGGTTTTATCCAGAAGCTCCA
GGCGGCAGAGAACGGAGCTTTGCAGTACTCTATCCCTCGGGCTGCCGGGA
TTGAACACTGGCAGCAGCGACAAGATAGCCATACCGACATTTTGCGAGAA
ATGGTGGGCCAATGCGAGGCGCGCCTGCAGGAATACGGCGTCCACATCCA
GGAGCTATACCGTAAGGTTGTGCCCAGCCGCGGCACCGGGGACGAGGCCC
GAGAAGGGCGTGACGAGTTTTCCAGATGCAGATGAAGGTCTGGGAGTTGC
ACAAGCTGGTCAAGGAACACAGAGAGCATGCTGAGACCGTCAACAAATTC
AGCACCCAGAGCTACGCGCTGGATCAGCACACGAAGTGCTGTCGCGGGCA
CGGATACATTGACAACAAGTCCCCTTGGATACCCCGCGCCGGATTCTATC
GACCGCACAGGACGATCCACGAAGGCCAAATCCCGACGATGAGAATTGGA
TCGCGTCAATGCCGAGAATGAGGAGCAGAAGCGCAAGATGACCCGCATGG
TGATACGTTCTTCCCAGGAATCTCTAACACAAGAAAGCTTGACTTCCTTT
CAGGTCGGTAATTCTGCTTCCTTGATCCCGGCGTCTTTCGTCCAGCGTGC
CTCGGCCAACATTGCAGCTCCTTCTCCTTTTACTTACTCTATCGATGGGC
CAACTACGCAAGTTACGCCGGATCAGCTGGCGACTCTTATCCGGCTTCAA
AACGATGCACTCCTCAAGGTAGCGGCCCAGGTGGCGGGCATGCACGAGAT
GGTGGAGCGGCTGAGAAGTGAGTGGAACTCTCGCACGGGCCAAGACCCCT
TCGAGAAACTGAAGCTGCACATTTTGCGAGTGCGGAATGCGCACGCTGAA
ATCTCACTGCTATCTGATGAGTTGCGCACGCAGGTTGAGCGTTTGCGCGG
TTTTATCCAGAAGCTCCAGGCGGCAGAGAACGGAGCTTTGCAGTACTCTA
TCCCTCGGGCTGCCGGGATTGAACACTGGCAGCAGCGACAAGATAGCCAT
ACCGACATTTTGCGAGAAATGGTGGGCCAATGCGAGGCGCGCCTGCAGGA
ATACGGCGTCCACATCCAGGAGCTATACCGTAAGGTTGTGCCCAGCCGCG
GCACCGGGGACGAGGCCCGAGAAGGGCGTGACGAGTTTTCCAGATGCAGA
TGAAGGTCTGGGAGTTGCACAAGCTGGTCAAGGAACACAGAGAGCATGCT
GAGACCGTCAACAAATTCAGCACCCAGAGCTACGCGCTGGATCAGCACAC
GAAGTGCTGTCGCGGGCACGGATACATTGACAACAAGTCCCCTTGGATAC
CCCGCGCCGGATTCTATCGACCGCACAGGACGATCCACGAAGGCCAAATC
CCGACGATGAGAATTGGATCGCGTCAATGCCGAGAATGAGGAGCAGAAGC
GCAAGATGACCCGCATGGTGATACGTTCTTCCCAGGAATCTCTAACACAA
GAAAGCTTGACTTCCTTTCAGGTCGGTAATTCTGCTTCCTTGATCCCGGC
GTCTTTCGTCCAGCGTGCCTCGGCCAACATTGCAGCTCCTTCTCCTTTTA
CTTACTCTATCGATGGGCCAACTACGCAAGTTACGCCGGATCAGCTGGCG
ACTCTTATCCGGCTTCAAAACGATGCACTCCTCAAGGTAGCGGCCCAGGT
GGCGGGCATGCACGAGATGGTGGAGCGGCTGAGAAGTGAGTGGAACTCTC
GCACGGGCCAAGACCCCTTCGAGAAACTGAAGCTGCACATTTTGCGAGTG
CGGAATGCGCACGCTGAAATCTCACTGCTATCTGATGAGTTGCGCACGCA
GGTTGAGCGTTTGCGCGGTTTTATCCAGAAGCTCCAGGCGGCAGAGAACG
GAGCTTTGCAGTACTCTATCCCTCGGGCTGCCGGGATTGAACACTGGCAG
CAGCGACAAGATAGCCATACCGACATTTTGCGAGAAATGGTGGGCCAATG
CGAGGCGCGCCTGCAGGAATACGGCGTCCACATCCAGGAGCTATACCGTA
AGGTTGTGCCCAGCCGCGGCACCGGGGACGAGGCCCGAGAAGGGCGTGAC
GAGTTTTCCAGATGCAGATGAAGGTCTGGGAGTTGCACAAGCTGGTCAAG
GAACACAGAGAGCATGCTGAGACCGTCAACAAATTCAGCACCCAGAGCTA
CGCGCTGGATCAGCACACGAAGTGCTGTCGCGGGCACGGATACATTGACA
ACAAGTCCCCTTGGATACCCCGCGCCGGATTCTATCGACCGCACAGGACG
ATCCACGAAGGCCAAATCCCGACGATGAGAATTGGATCGCGTCAATGCCG
AGAATGAGGAGCAGAAGCGCAAGATGACCCGCATGGTGATACGTTCTTCC
CAGGAATCTCTAACACAAGAAAGCTTGACTTCCTTTCAGGTCGGTAATTC
TGCTTCCTTGATCCCGGCGTCTTTCGTCCAGCGTGCCTCGGCCAACATTG
CAGCTCCTTCTCCTTTTACTTACTCTATCGATGGGCCAACTACGCAAGTT
ACGCCGGATCAGCTGGCGACTCTTATCCGGCTTCAAAACGATGCACTCCT
CAAGGTAGCGGCCCAGGTGGCGGGCATGCACGAGATGGTGGAGCGGCTGA
GAAGTGAGTGGAACTCTCGCACGGGCCAAGACCCCTTCGAGAAACTGAAG
CTGCACATTTTGCGAGTGCGGAATGCGCACGCTGAAATCTCACTGCTATC
TGATGAGTTGCGCACGCAGGTTGAGCGTTTGCGCGGTTTTATCCAGAAGC
TCCAGGCGGCAGAGAACGGAGCTTTGCAGTACTCTATCCCTCGGGCTGCC
GGGATTGAACACTGGCAGCAGCGACAAGATAGCCATACCGACATTTTGCG
AGAAATGGTGGGCCAATGCGAGGCGCGCCTGCAGGAATACGGCGTCCACA
TCCAGGAGCTATACCGTAAGGTTGTGCCCAGCCGCGGCACCGGGGACGAG
GCCCGAGAAGGGCGTGACGAGTTTTCCAGATGCAGATGAAGGTCTGGGAG
TTGCACAAGCTGGTCAAGGAACACAGAGAGCATGCTGAGACCGTCAACAA
ATTCAGCACCCAGAGCTACGCGCTGGATCAGCACACGAAG back to top
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