Properties
| Property Name | Value |
|---|
| TranscriptId | 584331 |
| Track | FilteredModels2 |
| ProteinId | 584245 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:487373..488868 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3027 ID=mRNA_3027|Name=jgi.p|Nanoce1779_2|584245|organism=Nannochloropsis oceanica|type=mRNA|length=1496bp
ACAGGCCACCACACGACTCGCTCGCAGCAGCCCGCCAGCCAGCAGCCATG
GGTGAAAAGCAGACGAGCTTGGCTGAGACGATACAGCCTTTTGTCTGTGG
CGGCGCGAGTGCTTGTTTCGCCAGCAGCATCATCCATCCCATCGACCTGG
CGAAGGTGCGCCTCCAACTCTTCTCCACCCTCAACCCTGGCGTAAAGGCA
CCAGGCGCAGTGAGTGTCATCGTTAACTTGGTCAAAAACGACGGGTTAGC
GGCGGCCTATGCGGGTTTGAGTGCCTCGCTGATGAGGCAAGCGATCTACG
GCACGGCACGCATTGGCTTGCATCGGACCTTTTCGGATAAACTAGAGAAA
ACCATGGGTGGGACAATCCCCTTCTGGATGAAGACCTTGAGCGGCATGTT
GTCAGGCGGCATCGCCGTCTGCATCGGCACGCCCTTCGACGTCGCCCTGG
TGCGCATGCAGGCTGACTCCATGAAGCCCGTAGAGCTGCGCCGGAACTAC
AAGAACGTGTTTGACGCGATCGGACGCATCTTCAGGGAGGAGGGGCCCAA
ACGGCTGTATGCGGGTTTGGCGCCCAATGTGCTGCGTGGGATGTCCATGA
ACGTGGGTATGCTCGCGTGCTACGACCAGGCAAAGGACGCCATATCCGTG
CACGTGACCAAGGACGCAGACCCAAAGAAGCCCTCCGTCGTCACCAACCT
CCTCTCCTCAGCCGTAGCCGGCTTCACCTCTGCCTTCTTCTCTCTACCCT
TCGACATGCTCAAATCCCGGATGCAGGACATGAAACCCGACGCCAATGGC
AAGATGCCCTACACGGGCCTGGCCGACTGTACGCTGTCCATCTTCAGAAA
AGAGGGCCTGCTCGCCTTCTGGACAGGCTTTCCCGCTTACTACGGCCGAT
GCGCACCCCACGCCATGATTATCTTGCTGACCATTGAGCAGGTTACCAAA
GTTTACCGTTCTGTCTTCGTGTTGGCGAAACCTGTGCCCCTTGCCTCATA
AGATGAGAGGAAGAGGGGGGCGGGGCACAGAAGCAGCATCGGGAGCAGTA
GCAAGAGGCTTAGGTAGAGGCACGGAAGATAGATAGAAGAAGGAGAAAAG
GAGAGGCTGACGGCAAGGAAGGAAGGGGCCCAGACACCAAATGAATGAAT
TATCCTGATCATGACTCCATTTCCCGGCCCTCTTCTTCCGACGGGAAGTG
TGGTGACCCACAGGCATAGAGGACATAGGTGGAGGGAAGGAGATTGTGGG
GTTTGGTTAGCTGCGTTATTTTTATACATCAAAACGCATGCACATTGTTC
AGCCATGCGCTCGGATGCGACCAGGCGAGCAGGGCGGGAGGGATAAAGGT
CTCTTTATTGAAAGAGAGATAGTTGGTGAGCGGAAATGATTTACTGGCGC
GAAACGAAATGTGCTGCGGTGTGACAGTTTTGGAGCAAGGGGGGTACAAT
CCGTATCCATCGATAGAAGAAAAAATATAATGCATAATGTCTGTCA back to topprotein sequence of jgi.p|Nanoce1779_2|584245 >mRNA_3027-protein ID=mRNA_3027-protein|Name=jgi.p|Nanoce1779_2|584245|organism=Nannochloropsis oceanica|type=polypeptide|length=318bp
MGEKQTSLAETIQPFVCGGASACFASSIIHPIDLAKVRLQLFSTLNPGVK
APGAVSVIVNLVKNDGLAAAYAGLSASLMRQAIYGTARIGLHRTFSDKLE
KTMGGTIPFWMKTLSGMLSGGIAVCIGTPFDVALVRMQADSMKPVELRRN
YKNVFDAIGRIFREEGPKRLYAGLAPNVLRGMSMNVGMLACYDQAKDAIS
VHVTKDADPKKPSVVTNLLSSAVAGFTSAFFSLPFDMLKSRMQDMKPDAN
GKMPYTGLADCTLSIFRKEGLLAFWTGFPAYYGRCAPHAMIILLTIEQVT
KVYRSVFVLAKPVPLAS* back to topmRNA from alignment at scaffold_7:487373..488868- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3027 ID=mRNA_3027|Name=jgi.p|Nanoce1779_2|584245|organism=Nannochloropsis oceanica|type=mRNA|length=1496bp|location=Sequence derived from alignment at scaffold_7:487373..488868- (Nannochloropsis oceanica)
ACAGGCCACCACACGACTCGCTCGCAGCAGCCCGCCAGCCAGCAGCCATG
GGTGAAAAGCAGACGAGCTTGGCTGAGACGATACAGCCTTTTGTCTGTGG
CGGCGCGAGTGCTTGTTTCGCCAGCAGCATCATCCATCCCATCGACCTGG
CGAAGGTGCGCCTCCAACTCTTCTCCACCCTCAACCCTGGCGTAAAGGCA
CCAGGCGCAGTGAGTGTCATCGTTAACTTGGTCAAAAACGACGGGTTAGC
GGCGGCCTATGCGGGTTTGAGTGCCTCGCTGATGAGGCAAGCGATCTACG
GCACGGCACGCATTGGCTTGCATCGGACCTTTTCGGATAAACTAGAGAAA
ACCATGGGTGGGACAATCCCCTTCTGGATGAAGACCTTGAGCGGCATGTT
GTCAGGCGGCATCGCCGTCTGCATCGGCACGCCCTTCGACGTCGCCCTGG
TGCGCATGCAGGCTGACTCCATGAAGCCCGTAGAGCTGCGCCGGAACTAC
AAGAACGTGTTTGACGCGATCGGACGCATCTTCAGGGAGGAGGGGCCCAA
ACGGCTGTATGCGGGTTTGGCGCCCAATGTGCTGCGTGGGATGTCCATGA
ACGTGGGTATGCTCGCGTGCTACGACCAGGCAAAGGACGCCATATCCGTG
CACGTGACCAAGGACGCAGACCCAAAGAAGCCCTCCGTCGTCACCAACCT
CCTCTCCTCAGCCGTAGCCGGCTTCACCTCTGCCTTCTTCTCTCTACCCT
TCGACATGCTCAAATCCCGGATGCAGGACATGAAACCCGACGCCAATGGC
AAGATGCCCTACACGGGCCTGGCCGACTGTACGCTGTCCATCTTCAGAAA
AGAGGGCCTGCTCGCCTTCTGGACAGGCTTTCCCGCTTACTACGGCCGAT
GCGCACCCCACGCCATGATTATCTTGCTGACCATTGAGCAGGTTACCAAA
GTTTACCGTTCTGTCTTCGTGTTGGCGAAACCTGTGCCCCTTGCCTCATA
AGATGAGAGGAAGAGGGGGGCGGGGCACAGAAGCAGCATCGGGAGCAGTA
GCAAGAGGCTTAGGTAGAGGCACGGAAGATAGATAGAAGAAGGAGAAAAG
GAGAGGCTGACGGCAAGGAAGGAAGGGGCCCAGACACCAAATGAATGAAT
TATCCTGATCATGACTCCATTTCCCGGCCCTCTTCTTCCGACGGGAAGTG
TGGTGACCCACAGGCATAGAGGACATAGGTGGAGGGAAGGAGATTGTGGG
GTTTGGTTAGCTGCGTTATTTTTATACATCAAAACGCATGCACATTGTTC
AGCCATGCGCTCGGATGCGACCAGGCGAGCAGGGCGGGAGGGATAAAGGT
CTCTTTATTGAAAGAGAGATAGTTGGTGAGCGGAAATGATTTACTGGCGC
GAAACGAAATGTGCTGCGGTGTGACAGTTTTGGAGCAAGGGGGGTACAAT
CCGTATCCATCGATAGAAGAAAAAATATAATGCATAATGTCTGTCA back to topCoding sequence (CDS) from alignment at scaffold_7:487373..488868- >mRNA_3027 ID=mRNA_3027|Name=jgi.p|Nanoce1779_2|584245|organism=Nannochloropsis oceanica|type=CDS|length=954bp|location=Sequence derived from alignment at scaffold_7:487373..488868- (Nannochloropsis oceanica)
ATGGGTGAAAAGCAGACGAGCTTGGCTGAGACGATACAGCCTTTTGTCTG
TGGCGGCGCGAGTGCTTGTTTCGCCAGCAGCATCATCCATCCCATCGACC
TGGCGAAGGTGCGCCTCCAACTCTTCTCCACCCTCAACCCTGGCGTAAAG
GCACCAGGCGCAGTGAGTGTCATCGTTAACTTGGTCAAAAACGACGGGTT
AGCGGCGGCCTATGCGGGTTTGAGTGCCTCGCTGATGAGGCAAGCGATCT
ACGGCACGGCACGCATTGGCTTGCATCGGACCTTTTCGGATAAACTAGAG
AAAACCATGGGTGGGACAATCCCCTTCTGGATGAAGACCTTGAGCGGCAT
GTTGTCAGGCGGCATCGCCGTCTGCATCGGCACGCCCTTCGACGTCGCCC
TGGTGCGCATGCAGGCTGACTCCATGAAGCCCGTAGAGCTGCGCCGGAAC
TACAAGAACGTGTTTGACGCGATCGGACGCATCTTCAGGGAGGAGGGGCC
CAAACGGCTGTATGCGGGTTTGGCGCCCAATGTGCTGCGTGGGATGTCCA
TGAACGTGGGTATGCTCGCGTGCTACGACCAGGCAAAGGACGCCATATCC
GTGCACGTGACCAAGGACGCAGACCCAAAGAAGCCCTCCGTCGTCACCAA
CCTCCTCTCCTCAGCCGTAGCCGGCTTCACCTCTGCCTTCTTCTCTCTAC
CCTTCGACATGCTCAAATCCCGGATGCAGGACATGAAACCCGACGCCAAT
GGCAAGATGCCCTACACGGGCCTGGCCGACTGTACGCTGTCCATCTTCAG
AAAAGAGGGCCTGCTCGCCTTCTGGACAGGCTTTCCCGCTTACTACGGCC
GATGCGCACCCCACGCCATGATTATCTTGCTGACCATTGAGCAGGTTACC
AAAGTTTACCGTTCTGTCTTCGTGTTGGCGAAACCTGTGCCCCTTGCCTC
ATAA back to top
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