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Properties
| Property Name | Value |
|---|
| TranscriptId | 576948 |
| Track | FilteredModels2 |
| ProteinId | 576862 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:742912..744205 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_302 ID=mRNA_302|Name=jgi.p|Nanoce1779_2|576862|organism=Nannochloropsis oceanica|type=mRNA|length=1000bp
ACAGACGACCTTCATACCACACTCTAGAACATGGCGTCCAAAAGCATCCT
CGACTCCTATCAGCAAAAACTGACGGATCTCCGCAGCAGCATGCCCGCGC
GCATCGCCGAGCTGGATGCCGTGCTCCATTCTGCCCCCTTCGGTAAGAGC
ATTGCGGAAATTATGGCCCAGTCCCGTGCGTCTGTGGCCTCGAATCCCGA
GGTGGCTGGCTCCCTCGGTGTGGCCCGCGACGTGCTCCTGCGTACGGTTG
AAGACCTCGGCTTGGTTTCCACCTGGTTGAAGCTCAAGGTGCCCAAGGTG
AGCGATGGTGGCAACTTTGGCGTTGCTGTTGTGCTGGAGGTGGTCAAGAC
GATTGAGCAGAAGCTGGACGGCTTGAACAAGGCCCTAGACGACCTTCCTT
CCTATTTCTCAGAGCGCGCCGGCGCCGTTGACAAAGTGGTGGCACGAACC
TCCACGGACATTAAGGAGAGCAAGAGCAAGAGCAGCTCGACAGGGGGGAA
GGACGGGGACGAGACCAAGGGCAGTGAGAGCCAGTCGGAAGAGAAGTCCA
CCAAGAAGAACGAAGCTTTGCCTGACCAGCTCGAACACGTCGTGGCATTG
GATGCCAAATTCTTCACTATTTTTAAACGGGACGTGGAGTTGTGCCAGTC
CGCATACTTAACTTGCTTTGACATATTGGAGAAGAACTATACTCTCCTCA
ATGCCCCCCGTGGGGATAAGGGCGATTCGTCCCACCTTAGCATGTTCTAA
ACTTCCCCCCGTTAAAGAGTTATCGCGATTTGAAATATCTCTGACATTTG
GACAATTTATATTCATCACAGAGTGGATGATAGGCTGTTGGGAGAGCGGC
GAGTACAAGGACGTGTTGTAATAGCATGCGCCCGTGACGCACTAGAAGAT
GAAAGTGGGTGTGAGCGAGTACAAGGGGGCAACTGAGAAATTCAGAGAGA
CACCCGGCCGAAAGAATGCGAAAAAGAAGCACCCGATTTTCGTGAAGAAA back to topprotein sequence of jgi.p|Nanoce1779_2|576862 >mRNA_302-protein ID=mRNA_302-protein|Name=jgi.p|Nanoce1779_2|576862|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MASKSILDSYQQKLTDLRSSMPARIAELDAVLHSAPFGKSIAEIMAQSRA
SVASNPEVAGSLGVARDVLLRTVEDLGLVSTWLKLKVPKVSDGGNFGVAV
VLEVVKTIEQKLDGLNKALDDLPSYFSERAGAVDKVVARTSTDIKESKSK
SSSTGGKDGDETKGSESQSEEKSTKKNEALPDQLEHVVALDAKFFTIFKR
DVELCQSAYLTCFDILEKNYTLLNAPRGDKGDSSHLSMF* back to topmRNA from alignment at scaffold_3:742912..744205- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_302 ID=mRNA_302|Name=jgi.p|Nanoce1779_2|576862|organism=Nannochloropsis oceanica|type=mRNA|length=1294bp|location=Sequence derived from alignment at scaffold_3:742912..744205- (Nannochloropsis oceanica)
ACAGACGACCTTCATACCACACTCTAGAACATGGCGTCCAAAAGCATCCT
CGACTCCTATCAGGTAAATTGATTTTCGGTCCAACTCTTTCTCTCCATTT
CCTTCCCTACGCGCCAGGCAGTGTATGTGTATGAGCGGTGGTGCGTGGGC
GAGACTCTCCTACCCATGACGTACACAACGTATACAACGCGCATGCTCGT
CCATACAGGATGCACACCAAAGCGAGAGAGTGCAAGCCGAATCCCTCCAC
AAGTGCACCGTTCCTCGACTCTCTCAACTCCCTTGGCCAGCATATCCCAC
CACCCAACCTGAGCATCAATATTCACCCGATATACACTCACCAAACGCAA
CCCACAGCAAAAACTGACGGATCTCCGCAGCAGCATGCCCGCGCGCATCG
CCGAGCTGGATGCCGTGCTCCATTCTGCCCCCTTCGGTAAGAGCATTGCG
GAAATTATGGCCCAGTCCCGTGCGTCTGTGGCCTCGAATCCCGAGGTGGC
TGGCTCCCTCGGTGTGGCCCGCGACGTGCTCCTGCGTACGGTTGAAGACC
TCGGCTTGGTTTCCACCTGGTTGAAGCTCAAGGTGCCCAAGGTGAGCGAT
GGTGGCAACTTTGGCGTTGCTGTTGTGCTGGAGGTGGTCAAGACGATTGA
GCAGAAGCTGGACGGCTTGAACAAGGCCCTAGACGACCTTCCTTCCTATT
TCTCAGAGCGCGCCGGCGCCGTTGACAAAGTGGTGGCACGAACCTCCACG
GACATTAAGGAGAGCAAGAGCAAGAGCAGCTCGACAGGGGGGAAGGACGG
GGACGAGACCAAGGGCAGTGAGAGCCAGTCGGAAGAGAAGTCCACCAAGA
AGAACGAAGCTTTGCCTGACCAGCTCGAACACGTCGTGGCATTGGATGCC
AAATTCTTCACTATTTTTAAACGGGACGTGGAGTTGTGCCAGTCCGCATA
CTTAACTTGCTTTGACATATTGGAGAAGAACTATACTCTCCTCAATGCCC
CCCGTGGGGATAAGGGCGATTCGTCCCACCTTAGCATGTTCTAAACTTCC
CCCCGTTAAAGAGTTATCGCGATTTGAAATATCTCTGACATTTGGACAAT
TTATATTCATCACAGAGTGGATGATAGGCTGTTGGGAGAGCGGCGAGTAC
AAGGACGTGTTGTAATAGCATGCGCCCGTGACGCACTAGAAGATGAAAGT
GGGTGTGAGCGAGTACAAGGGGGCAACTGAGAAATTCAGAGAGACACCCG
GCCGAAAGAATGCGAAAAAGAAGCACCCGATTTTCGTGAAGAAA back to topCoding sequence (CDS) from alignment at scaffold_3:742912..744205- >mRNA_302 ID=mRNA_302|Name=jgi.p|Nanoce1779_2|576862|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_3:742912..744205- (Nannochloropsis oceanica)
CAAAAACTGACGGATCTCCGCAGCAGCATGCCCGCGCGCATCGCCGAGCT
GGATGCCGTGCTCCATTCTGCCCCCTTCGGTAAGAGCATTGCGGAAATTA
TGGCCCAGTCCCGTGCGTCTGTGGCCTCGAATCCCGAGGTGGCTGGCTCC
CTCGGTGTGGCCCGCGACGTGCTCCTGCGTACGGTTGAAGACCTCGGCTT
GGTTTCCACCTGGTTGAAGCTCAAGGTGCCCAAGGTGAGCGATGGTGGCA
ACTTTGGCGTTGCTGTTGTGCTGGAGGTGGTCAAGACGATTGAGCAGAAG
CTGGACGGCTTGAACAAGGCCCTAGACGACCTTCCTTCCTATTTCTCAGA
GCGCGCCGGCGCCGTTGACAAAGTGGTGGCACGAACCTCCACGGACATTA
AGGAGAGCAAGAGCAAGAGCAGCTCGACAGGGGGGAAGGACGGGGACGAG
ACCAAGGGCAGTGAGAGCCAGTCGGAAGAGAAGTCCACCAAGAAGAACGA
AGCTTTGCCTGACCAGCTCGAACACGTCGTGGCATTGGATGCCAAATTCT
TCACTATTTTTAAACGGGACGTGGAGTTGTGCCAGTCCGCATACTTAACT
TGCTTTGACATATTGGAGAAGAACTATACTCTCCTCAATGCCCCCCGTGG
GGATAAGGGCGATTCGTCCCACCTTAGCATGTTCTAAATGGCGTCCAAAA
GCATCCTCGACTCCTATCAGCAAAAACTGACGGATCTCCGCAGCAGCATG
CCCGCGCGCATCGCCGAGCTGGATGCCGTGCTCCATTCTGCCCCCTTCGG
TAAGAGCATTGCGGAAATTATGGCCCAGTCCCGTGCGTCTGTGGCCTCGA
ATCCCGAGGTGGCTGGCTCCCTCGGTGTGGCCCGCGACGTGCTCCTGCGT
ACGGTTGAAGACCTCGGCTTGGTTTCCACCTGGTTGAAGCTCAAGGTGCC
CAAGGTGAGCGATGGTGGCAACTTTGGCGTTGCTGTTGTGCTGGAGGTGG
TCAAGACGATTGAGCAGAAGCTGGACGGCTTGAACAAGGCCCTAGACGAC
CTTCCTTCCTATTTCTCAGAGCGCGCCGGCGCCGTTGACAAAGTGGTGGC
ACGAACCTCCACGGACATTAAGGAGAGCAAGAGCAAGAGCAGCTCGACAG
GGGGGAAGGACGGGGACGAGACCAAGGGCAGTGAGAGCCAGTCGGAAGAG
AAGTCCACCAAGAAGAACGAAGCTTTGCCTGACCAGCTCGAACACGTCGT
GGCATTGGATGCCAAATTCTTCACTATTTTTAAACGGGACGTGGAGTTGT
GCCAGTCCGCATACTTAACTTGCTTTGACATATTGGAGAAGAACTATACT
CTCCTCAATGCCCCCCGTGGGGATAAGGGCGATTCGTCCCACCTTAGCAT
GTTCTAAATGGCGTCCAAAAGCATCCTCGACTCCTATCAG back to top
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