Properties
| Property Name | Value |
|---|
| TranscriptId | 584285 |
| Track | FilteredModels2 |
| ProteinId | 584199 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:468951..470126 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3017 ID=mRNA_3017|Name=jgi.p|Nanoce1779_2|584199|organism=Nannochloropsis oceanica|type=mRNA|length=1004bp
CAGCATATGTTTGAAGTGACGGGCCTGGAGATAGTGGTGCTGGTGGGGGT
GGCTTCGTTTTTGCTCGGCAAGAGGGAAGTACCACAGCTCGCGCGCATCG
TGGGACGAGGTACAGGCAAGATGGTAGCTTTGTTGAATACGGCACGGGAT
CAGTTTACCAAGGCCACGCAAGACACGCAGTTTTCCAGACTTACTCATGA
GGTTCAACAGAATATGTACGAGCTTGACTCAATCCGCTGCGAGGTACGCG
CCGCGGGTTCGCAGAAGCAGCCGTTTCGCCTCCGTCGCCCAGGCATGCCC
GCAACGGGATCGCCTCCAGCAGGCAGTCTCGACCCGAAATTGTCCAAAAC
TCACGGTGACATCATTTCTGCGTCTGTCTCATCGGCAATATATTCTATGC
CGGGAGAAGCCTTGCCACAAAGAGTCCGTGACATCAGCAACATAAGCAGC
AGGAGCAGTAACAAAAAGCTAGGCGAGTTGGCCATGGCCGAGCTTTTGTG
GCAGGTAAATACGATGACAGAGTTTCGAAGCATGCGCATGTCTGTTGTGT
CACGCACTTATTACTTCTCCACTTGCCCTATTTTTCCTAACGGCAATCAC
CACCTACGACTCTCTCATTCTCGTCTTCCACTCTCTCCCCCCCACCAAAG
GAATCTGCGTTAGCCGGGGGAAAGGGAGGCAAAATGACACATCCGAATCA
GCAACAGCTGCAGCAGCAAGCATCAGCACCTTTCCCTCCGACAGGCTCCA
CCATGATGGAGAACGTCATTTTAGAGACGCTGTTAAGGGATCACGTAGAC
CGTGTTTCCTTCAGGAAACAAGGGGAAAAACGCACTGAGTAAGAGCTTGA
GTAATAGATGTTTGGGAGAGTTGCCGACGAGTACATAATTTTGCTGTCAG
AAAAATTTAATGAGGCGACTACATAAAAGAGACGCATCATTTGTCTTTTA
GTTTCAATTTCCCTGCTTGTTTTTCTCAGTTATTATTTTACGCACCCTTC
CTCT back to topprotein sequence of jgi.p|Nanoce1779_2|584199 >mRNA_3017-protein ID=mRNA_3017-protein|Name=jgi.p|Nanoce1779_2|584199|organism=Nannochloropsis oceanica|type=polypeptide|length=219bp
MFEVTGLEIVVLVGVASFLLGKREVPQLARIVGRGTGKMVALLNTARDQF
TKATQDTQFSRLTHEVQQNMYELDSIRCEVRAAGSQKQPFRLRRPGMPAT
GSPPAGSLDPKLSKTHGDIISASVSSAIYSMPGEALPQRVRDISNISSRS
SNKKLGELAMAELLWQVNTMTEFRSMRMSVVSRTYYFSTCPIFPNGNHHL
RLSHSRLPLSPPHQRNLR* back to topmRNA from alignment at scaffold_7:468951..470126- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3017 ID=mRNA_3017|Name=jgi.p|Nanoce1779_2|584199|organism=Nannochloropsis oceanica|type=mRNA|length=1176bp|location=Sequence derived from alignment at scaffold_7:468951..470126- (Nannochloropsis oceanica)
CAGCATATGTTTGAAGTGACGGGCCTGGAGATAGTGGTGCTGGTGGGGGT
GGCTTCGTTTTTGCTCGGTAAGTGGACGCACCCACGACAGCGCGCCCCTC
GACCCCGTCGTGACCCCCCCCCACACCCCATTCCCCTTATCCTAGGCAAG
AGGGAAGTACCACAGCTCGCGCGCATCGTGGGACGAGGTACAGGCAAGAT
GGTAGCTTTGTTGAATACGGCACGGGATCAGTTTACCAAGGCCACGCAAG
ACACGCAGTTTTCCAGAGTACGTGTCTGTCTGGGGTTAGAGGGAAGGAAA
CGTAGCAGCCCATAAAAAAGCAGGCATCTTTAAATAAGCCACTTCTAATC
CTCCCATACAGCTTACTCATGAGGTTCAACAGAATATGTACGAGCTTGAC
TCAATCCGCTGCGAGGTACGCGCCGCGGGTTCGCAGAAGCAGCCGTTTCG
CCTCCGTCGCCCAGGCATGCCCGCAACGGGATCGCCTCCAGCAGGCAGTC
TCGACCCGAAATTGTCCAAAACTCACGGTGACATCATTTCTGCGTCTGTC
TCATCGGCAATATATTCTATGCCGGGAGAAGCCTTGCCACAAAGAGTCCG
TGACATCAGCAACATAAGCAGCAGGAGCAGTAACAAAAAGCTAGGCGAGT
TGGCCATGGCCGAGCTTTTGTGGCAGGTAAATACGATGACAGAGTTTCGA
AGCATGCGCATGTCTGTTGTGTCACGCACTTATTACTTCTCCACTTGCCC
TATTTTTCCTAACGGCAATCACCACCTACGACTCTCTCATTCTCGTCTTC
CACTCTCTCCCCCCCACCAAAGGAATCTGCGTTAGCCGGGGGAAAGGGAG
GCAAAATGACACATCCGAATCAGCAACAGCTGCAGCAGCAAGCATCAGCA
CCTTTCCCTCCGACAGGCTCCACCATGATGGAGAACGTCATTTTAGAGAC
GCTGTTAAGGGATCACGTAGACCGTGTTTCCTTCAGGAAACAAGGGGAAA
AACGCACTGAGTAAGAGCTTGAGTAATAGATGTTTGGGAGAGTTGCCGAC
GAGTACATAATTTTGCTGTCAGAAAAATTTAATGAGGCGACTACATAAAA
GAGACGCATCATTTGTCTTTTAGTTTCAATTTCCCTGCTTGTTTTTCTCA
GTTATTATTTTACGCACCCTTCCTCT back to topCoding sequence (CDS) from alignment at scaffold_7:468951..470126- >mRNA_3017 ID=mRNA_3017|Name=jgi.p|Nanoce1779_2|584199|organism=Nannochloropsis oceanica|type=CDS|length=1971bp|location=Sequence derived from alignment at scaffold_7:468951..470126- (Nannochloropsis oceanica)
CTTACTCATGAGGTTCAACAGAATATGTACGAGCTTGACTCAATCCGCTG
CGAGGTACGCGCCGCGGGTTCGCAGAAGCAGCCGTTTCGCCTCCGTCGCC
CAGGCATGCCCGCAACGGGATCGCCTCCAGCAGGCAGTCTCGACCCGAAA
TTGTCCAAAACTCACGGTGACATCATTTCTGCGTCTGTCTCATCGGCAAT
ATATTCTATGCCGGGAGAAGCCTTGCCACAAAGAGTCCGTGACATCAGCA
ACATAAGCAGCAGGAGCAGTAACAAAAAGCTAGGCGAGTTGGCCATGGCC
GAGCTTTTGTGGCAGGTAAATACGATGACAGAGTTTCGAAGCATGCGCAT
GTCTGTTGTGTCACGCACTTATTACTTCTCCACTTGCCCTATTTTTCCTA
ACGGCAATCACCACCTACGACTCTCTCATTCTCGTCTTCCACTCTCTCCC
CCCCACCAAAGGAATCTGCGTTAGGCAAGAGGGAAGTACCACAGCTCGCG
CGCATCGTGGGACGAGGTACAGGCAAGATGGTAGCTTTGTTGAATACGGC
ACGGGATCAGTTTACCAAGGCCACGCAAGACACGCAGTTTTCCAGAATGT
TTGAAGTGACGGGCCTGGAGATAGTGGTGCTGGTGGGGGTGGCTTCGTTT
TTGCTCGCTTACTCATGAGGTTCAACAGAATATGTACGAGCTTGACTCAA
TCCGCTGCGAGGTACGCGCCGCGGGTTCGCAGAAGCAGCCGTTTCGCCTC
CGTCGCCCAGGCATGCCCGCAACGGGATCGCCTCCAGCAGGCAGTCTCGA
CCCGAAATTGTCCAAAACTCACGGTGACATCATTTCTGCGTCTGTCTCAT
CGGCAATATATTCTATGCCGGGAGAAGCCTTGCCACAAAGAGTCCGTGAC
ATCAGCAACATAAGCAGCAGGAGCAGTAACAAAAAGCTAGGCGAGTTGGC
CATGGCCGAGCTTTTGTGGCAGGTAAATACGATGACAGAGTTTCGAAGCA
TGCGCATGTCTGTTGTGTCACGCACTTATTACTTCTCCACTTGCCCTATT
TTTCCTAACGGCAATCACCACCTACGACTCTCTCATTCTCGTCTTCCACT
CTCTCCCCCCCACCAAAGGAATCTGCGTTAGGCAAGAGGGAAGTACCACA
GCTCGCGCGCATCGTGGGACGAGGTACAGGCAAGATGGTAGCTTTGTTGA
ATACGGCACGGGATCAGTTTACCAAGGCCACGCAAGACACGCAGTTTTCC
AGAATGTTTGAAGTGACGGGCCTGGAGATAGTGGTGCTGGTGGGGGTGGC
TTCGTTTTTGCTCGCTTACTCATGAGGTTCAACAGAATATGTACGAGCTT
GACTCAATCCGCTGCGAGGTACGCGCCGCGGGTTCGCAGAAGCAGCCGTT
TCGCCTCCGTCGCCCAGGCATGCCCGCAACGGGATCGCCTCCAGCAGGCA
GTCTCGACCCGAAATTGTCCAAAACTCACGGTGACATCATTTCTGCGTCT
GTCTCATCGGCAATATATTCTATGCCGGGAGAAGCCTTGCCACAAAGAGT
CCGTGACATCAGCAACATAAGCAGCAGGAGCAGTAACAAAAAGCTAGGCG
AGTTGGCCATGGCCGAGCTTTTGTGGCAGGTAAATACGATGACAGAGTTT
CGAAGCATGCGCATGTCTGTTGTGTCACGCACTTATTACTTCTCCACTTG
CCCTATTTTTCCTAACGGCAATCACCACCTACGACTCTCTCATTCTCGTC
TTCCACTCTCTCCCCCCCACCAAAGGAATCTGCGTTAGGCAAGAGGGAAG
TACCACAGCTCGCGCGCATCGTGGGACGAGGTACAGGCAAGATGGTAGCT
TTGTTGAATACGGCACGGGATCAGTTTACCAAGGCCACGCAAGACACGCA
GTTTTCCAGAATGTTTGAAGTGACGGGCCTGGAGATAGTGGTGCTGGTGG
GGGTGGCTTCGTTTTTGCTCG back to top
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