Properties
| Property Name | Value |
|---|
| TranscriptId | 584224 |
| Track | FilteredModels2 |
| ProteinId | 584138 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:452499..453974 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3011 ID=mRNA_3011|Name=jgi.p|Nanoce1779_2|584138|organism=Nannochloropsis oceanica|type=mRNA|length=1476bp
CGGTGATGGCTAAAGTCGAAAACAAGAGAGTCAGGAGGGGGTTGACCACA
AAGCGTGGACCGTTGGGGCGCACTCACGTCCTCCCCATCGTCGAGCCCTA
CTATAGTTTTTCGACTGTGCGCTCAGTCATGACACCCAAAGCTCACACAC
TGCCGCTTCACGCAGCCCATCCCTAGTATCCTTGATCCCGCAGTACACGC
GCCTTCCAGTCAGCTACCAAGCTCTTGAAGCGCGTATTCCATCGCACTCC
ATCCGACCCTCAGCCCCCCACGCAACGCTTATGGCGCAGGAAAACGGCGC
TGGCCCAGGGAGAGGGGATGGCCCCTCGGCCGGCAAGATGAAGAAGGTAA
TCATCAAGCTGCTGGAAAACAACGATTACAACCCGGGCATCACGCTGGGT
CAAATCCGCAATAAGCTGCAAAAGAAGTTCGTGGACAAGTACCCAGCCTT
CGATTTCTCCTCGGTTGCCTTCAAGGTTCACTCGCGGGCGCTCATCGAGG
AAGTCATCCACGCCTATGAGGAAGTCACACGAGCCGGTACTGCCGGAGAC
ACTTCGGGGAATGGTGCGGCCAAGGCAACAGTGGGTAAGGACAACAAGGA
GAAGGAGAAGGAGAAGAAACGCACGCACAGTGATCACAACGATACCAGCA
GAGCTGCGGAGGCAACCAAGAAGGTCAAGGTGGAGGGGCATGCTGAAGGA
GGCGGCAAGTCAGCCGAGCAGCCGCCGGATCCCCGGCTTGTACGGCTGAA
GAAACTGGCGACAGCTATGGGGCTGGTTCCTGGCATCTACAAAGACTTTG
GGGTAATGGACGTCGAGGAAAAGGTCAAGGCCTTGCGGCAACGGCTTCAC
GCAAAGGGAGCAGTTTTTGACATTCTGCCCAGTCTTGATCAGATCAAGGC
GGCGGAGGAAGCTTACAAATTGCGAAAAGACTTGGAGGGTATTGATGCCG
GTAATATTGTCATGGGGAAGCGTGGAACTGTAGGTCCGTCAGCCTCAGGT
AGCGCCTCTATCAGTTCATTACCGACGAGCAGCGCTTTATCACTGGCAAT
TAAAGTGTCGCCTTTGAGCGCACTCGAGAAGGAAAAGAAGGGGAATAAAG
AGAACAAATCGAGCGGCGCCGGCACGGAGGGTTCGTCGTCAGAACAGGAG
ATGGACCTTTAGGTTCACGAGGTCAGGGATCACCACCCACAGTCTGTGGG
CCATGCATGCCGTGGAGGAAGTAGGCAGGTGTGGATCATGTGTGTGTAAC
AGTACAAAAAGAGGTAAAGGCTTCAAGTATATGTGTATGCGTTGGTGCAG
CGCAAGAAGTAATGGCGAATGACAAAAAGAAAAAATAGACGGCATGGCGT
CGTGTGTTCGACCATGGTTGCTTCCGAGGCCTCGCCCACAAAAAAGAAAT
CGAATAAAAGGAGGCAATGAAGGCATGACTAGATAATTGCTTGGCGTATC
AAAAGGAAAGCCTGTGTAGGTCAAAA back to topprotein sequence of jgi.p|Nanoce1779_2|584138 >mRNA_3011-protein ID=mRNA_3011-protein|Name=jgi.p|Nanoce1779_2|584138|organism=Nannochloropsis oceanica|type=polypeptide|length=294bp
MAQENGAGPGRGDGPSAGKMKKVIIKLLENNDYNPGITLGQIRNKLQKKF
VDKYPAFDFSSVAFKVHSRALIEEVIHAYEEVTRAGTAGDTSGNGAAKAT
VGKDNKEKEKEKKRTHSDHNDTSRAAEATKKVKVEGHAEGGGKSAEQPPD
PRLVRLKKLATAMGLVPGIYKDFGVMDVEEKVKALRQRLHAKGAVFDILP
SLDQIKAAEEAYKLRKDLEGIDAGNIVMGKRGTVGPSASGSASISSLPTS
SALSLAIKVSPLSALEKEKKGNKENKSSGAGTEGSSSEQEMDL* back to topmRNA from alignment at scaffold_7:452499..453974+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3011 ID=mRNA_3011|Name=jgi.p|Nanoce1779_2|584138|organism=Nannochloropsis oceanica|type=mRNA|length=1476bp|location=Sequence derived from alignment at scaffold_7:452499..453974+ (Nannochloropsis oceanica)
CGGTGATGGCTAAAGTCGAAAACAAGAGAGTCAGGAGGGGGTTGACCACA
AAGCGTGGACCGTTGGGGCGCACTCACGTCCTCCCCATCGTCGAGCCCTA
CTATAGTTTTTCGACTGTGCGCTCAGTCATGACACCCAAAGCTCACACAC
TGCCGCTTCACGCAGCCCATCCCTAGTATCCTTGATCCCGCAGTACACGC
GCCTTCCAGTCAGCTACCAAGCTCTTGAAGCGCGTATTCCATCGCACTCC
ATCCGACCCTCAGCCCCCCACGCAACGCTTATGGCGCAGGAAAACGGCGC
TGGCCCAGGGAGAGGGGATGGCCCCTCGGCCGGCAAGATGAAGAAGGTAA
TCATCAAGCTGCTGGAAAACAACGATTACAACCCGGGCATCACGCTGGGT
CAAATCCGCAATAAGCTGCAAAAGAAGTTCGTGGACAAGTACCCAGCCTT
CGATTTCTCCTCGGTTGCCTTCAAGGTTCACTCGCGGGCGCTCATCGAGG
AAGTCATCCACGCCTATGAGGAAGTCACACGAGCCGGTACTGCCGGAGAC
ACTTCGGGGAATGGTGCGGCCAAGGCAACAGTGGGTAAGGACAACAAGGA
GAAGGAGAAGGAGAAGAAACGCACGCACAGTGATCACAACGATACCAGCA
GAGCTGCGGAGGCAACCAAGAAGGTCAAGGTGGAGGGGCATGCTGAAGGA
GGCGGCAAGTCAGCCGAGCAGCCGCCGGATCCCCGGCTTGTACGGCTGAA
GAAACTGGCGACAGCTATGGGGCTGGTTCCTGGCATCTACAAAGACTTTG
GGGTAATGGACGTCGAGGAAAAGGTCAAGGCCTTGCGGCAACGGCTTCAC
GCAAAGGGAGCAGTTTTTGACATTCTGCCCAGTCTTGATCAGATCAAGGC
GGCGGAGGAAGCTTACAAATTGCGAAAAGACTTGGAGGGTATTGATGCCG
GTAATATTGTCATGGGGAAGCGTGGAACTGTAGGTCCGTCAGCCTCAGGT
AGCGCCTCTATCAGTTCATTACCGACGAGCAGCGCTTTATCACTGGCAAT
TAAAGTGTCGCCTTTGAGCGCACTCGAGAAGGAAAAGAAGGGGAATAAAG
AGAACAAATCGAGCGGCGCCGGCACGGAGGGTTCGTCGTCAGAACAGGAG
ATGGACCTTTAGGTTCACGAGGTCAGGGATCACCACCCACAGTCTGTGGG
CCATGCATGCCGTGGAGGAAGTAGGCAGGTGTGGATCATGTGTGTGTAAC
AGTACAAAAAGAGGTAAAGGCTTCAAGTATATGTGTATGCGTTGGTGCAG
CGCAAGAAGTAATGGCGAATGACAAAAAGAAAAAATAGACGGCATGGCGT
CGTGTGTTCGACCATGGTTGCTTCCGAGGCCTCGCCCACAAAAAAGAAAT
CGAATAAAAGGAGGCAATGAAGGCATGACTAGATAATTGCTTGGCGTATC
AAAAGGAAAGCCTGTGTAGGTCAAAA back to topCoding sequence (CDS) from alignment at scaffold_7:452499..453974+ >mRNA_3011 ID=mRNA_3011|Name=jgi.p|Nanoce1779_2|584138|organism=Nannochloropsis oceanica|type=CDS|length=882bp|location=Sequence derived from alignment at scaffold_7:452499..453974+ (Nannochloropsis oceanica)
ATGGCGCAGGAAAACGGCGCTGGCCCAGGGAGAGGGGATGGCCCCTCGGC
CGGCAAGATGAAGAAGGTAATCATCAAGCTGCTGGAAAACAACGATTACA
ACCCGGGCATCACGCTGGGTCAAATCCGCAATAAGCTGCAAAAGAAGTTC
GTGGACAAGTACCCAGCCTTCGATTTCTCCTCGGTTGCCTTCAAGGTTCA
CTCGCGGGCGCTCATCGAGGAAGTCATCCACGCCTATGAGGAAGTCACAC
GAGCCGGTACTGCCGGAGACACTTCGGGGAATGGTGCGGCCAAGGCAACA
GTGGGTAAGGACAACAAGGAGAAGGAGAAGGAGAAGAAACGCACGCACAG
TGATCACAACGATACCAGCAGAGCTGCGGAGGCAACCAAGAAGGTCAAGG
TGGAGGGGCATGCTGAAGGAGGCGGCAAGTCAGCCGAGCAGCCGCCGGAT
CCCCGGCTTGTACGGCTGAAGAAACTGGCGACAGCTATGGGGCTGGTTCC
TGGCATCTACAAAGACTTTGGGGTAATGGACGTCGAGGAAAAGGTCAAGG
CCTTGCGGCAACGGCTTCACGCAAAGGGAGCAGTTTTTGACATTCTGCCC
AGTCTTGATCAGATCAAGGCGGCGGAGGAAGCTTACAAATTGCGAAAAGA
CTTGGAGGGTATTGATGCCGGTAATATTGTCATGGGGAAGCGTGGAACTG
TAGGTCCGTCAGCCTCAGGTAGCGCCTCTATCAGTTCATTACCGACGAGC
AGCGCTTTATCACTGGCAATTAAAGTGTCGCCTTTGAGCGCACTCGAGAA
GGAAAAGAAGGGGAATAAAGAGAACAAATCGAGCGGCGCCGGCACGGAGG
GTTCGTCGTCAGAACAGGAGATGGACCTTTAG back to top
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