Properties
| Property Name | Value |
|---|
| TranscriptId | 392196 |
| Track | FilteredModels2 |
| ProteinId | 392110 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:377881..379122 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2973 ID=mRNA_2973|Name=jgi.p|Nanoce1779_2|392110|organism=Nannochloropsis oceanica|type=mRNA|length=960bp
CCGTCCTTTACATCATTCCTGGTCGCCGGATAAGGGCTGTGAAATAGGAG
TTTGCGCGCCTATCGGTCCGATCACCATTTCCTCAGGGAAAATAATAATT
ATGGCCGCACCAGTTACCCCACCGGCGCCCTTGCCGCAGCTTCCGCCGCC
CTTCCTGCAGACCCTTGTTAAAAACCCCAACGTGTCAGCGGCATGCGTTG
CAGGTGCAAATGCTGTCCTTCAAAATACCCGCTTGGCCCGACAAGCCGAA
TTCTTCTCAGGCCGCGTCACCGAAGGCCTCAGTCTAATCCTCCCCCCAGT
TCTTAAAAAAGTCGTCCTCGCTCCCGATAAACGCGTTGGAATGGGTGAAT
TCCTTCATGAGGCTCCTCTTTGGTCGTTGGGAGTGCCCGATTCTTGCGGA
TATATCGGATTAAACTACTGTCGAATTGAAGTTATCCCCGTTTTTGCCAA
GTGGGGTGTGTGTGTCCCATCGGAATGTACGTCTGAAGATATAAAGACAG
CCATCTTTCCTCCGATAACCCAGCAATTGGCCGACAGGGTCAAAACGGCC
TGCGGAGCCATGACGGCTGACAAGGCTCTCTTCTTCACCGTTGAGCCCAT
CAGTGTCGCAGCGTGGTCTGCGCTCATGCTGGTGCTGCTGCTGCTTCTGC
TGGCGCTGGGCGCGACGATCGTAGACGCGTACGGGCGAGAATGGAATCCT
CGGATTTTTAAAAAGGATGGCGCTTTGCGAAGGGTTCTGATGTGTTTCTC
ACTATCAGGAAATTATCAAAGTCTGATGGCGCCGCCGCGTGGGGGGCCGT
TCGCGTCGTTTGAAGCGGTTCGGACGCTGGGCATGTGCATGATCCTGCTT
GGCCACACGCTGTGAGTATACTCTTGTTCTTCAATCTAACCGTCGTCGGG
GTGACCAACCCCCGCGAATCGCTGGGGTTCTACGGCCGAGGCTTCTTGGC
AACCATGCCA back to topprotein sequence of jgi.p|Nanoce1779_2|392110 >mRNA_2973-protein ID=mRNA_2973-protein|Name=jgi.p|Nanoce1779_2|392110|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MAAPVTPPAPLPQLPPPFLQTLVKNPNVSAACVAGANAVLQNTRLARQAE
FFSGRVTEGLSLILPPVLKKVVLAPDKRVGMGEFLHEAPLWSLGVPDSCG
YIGLNYCRIEVIPVFAKWGVCVPSECTSEDIKTAIFPPITQQLADRVKTA
CGAMTADKALFFTVEPISVAAWSALMLVLLLLLLALGATIVDAYGREWNP
RIFKKDGALRRVLMCFSLSGNYQSLMAPPRGGPFASFEAVRTLGMCMILL
GHTL* back to topmRNA from alignment at scaffold_7:377881..379122- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2973 ID=mRNA_2973|Name=jgi.p|Nanoce1779_2|392110|organism=Nannochloropsis oceanica|type=mRNA|length=1242bp|location=Sequence derived from alignment at scaffold_7:377881..379122- (Nannochloropsis oceanica)
CCGTCCTTTACATCATTCCTGGTCGCCGGATAAGGGCTGTGAAATAGGAG
TTTGCGCGCCTATCGGTCCGATCACCATTTCCTCAGGGAAAATAATAATT
ATGGCCGCACCAGTTACCCCACCGGCGCCCTTGCCGCAGCTTCCGCCGCC
CTTCCTGCAGACCCTTGTTAAAAACCCCAACGTGTCAGCGGCATGCGTTG
CAGGTAAGCACCATGGAAGCAGAGAAAGTCTCGATACCTTTGCACAGCCT
CTCCCTCCCATCCGATTCCCCCTCATCCTTCCCCCGTAGCTTGCCACACT
ACATCTACGAACATCGTTCTTACCATCTTACCACAAAATACTGGATTTAT
AATCATACAAACATCCAGGTGCAAATGCTGTCCTTCAAAATACCCGCTTG
GCCCGACAAGCCGAATTCTTCTCAGGCCGCGTCACCGAAGGCCTCAGTCT
AATCCTCCCCCCAGTTCTTAAAAAAGTCGTCCTCGCTCCCGATAAACGCG
TTGGAATGGGTGAATTCCTTCATGAGGCTCCTCTTTGGTCGTTGGGAGTG
CCCGATTCTTGCGGATATATCGGATTAAACTACTGTCGAATTGAAGTTAT
CCCCGTTTTTGCCAAGTGGGGTGTGTGTGTCCCATCGGAATGTACGTCTG
AAGATATAAAGACAGCCATCTTTCCTCCGATAACCCAGCAATTGGCCGAC
AGGGTCAAAACGGCCTGCGGAGCCATGACGGCTGACAAGGCTCTCTTCTT
CACCGTTGAGCCCATCAGTGTCGCAGCGTGGTCTGCGCTCATGCTGGTGC
TGCTGCTGCTTCTGCTGGCGCTGGGCGCGACGATCGTAGACGCGTACGGG
CGAGAATGGAATCCTCGGATTTTTAAAAAGGATGGCGCTTTGCGAAGGGT
TCTGATGTGTTTCTCACTATCAGGAAATTATCAAAGTCTGATGGCGCCGC
CGCGTGGGGGGCCGTTCGCGTCGTTTGAAGCGGTTCGGACGCTGGGCATG
TGCATGATCCTGCTTGGCCACACGCTGTGAGTATACTCTTGTGCGCAAAT
CAACCTACCCTTTTGCCGTATCTTGTTCTCAGTTACAGATATTGTCTTTC
AGTTCCGCTTTCATGGTACGCACTCTCACAAATAACGCCCTTCCAACCTT
ACTCCAGGTTCTTCAATCTAACCGTCGTCGGGGTGACCAACCCCCGCGAA
TCGCTGGGGTTCTACGGCCGAGGCTTCTTGGCAACCATGCCA back to topCoding sequence (CDS) from alignment at scaffold_7:377881..379122- >mRNA_2973 ID=mRNA_2973|Name=jgi.p|Nanoce1779_2|392110|organism=Nannochloropsis oceanica|type=CDS|length=1530bp|location=Sequence derived from alignment at scaffold_7:377881..379122- (Nannochloropsis oceanica)
GTGCAAATGCTGTCCTTCAAAATACCCGCTTGGCCCGACAAGCCGAATTC
TTCTCAGGCCGCGTCACCGAAGGCCTCAGTCTAATCCTCCCCCCAGTTCT
TAAAAAAGTCGTCCTCGCTCCCGATAAACGCGTTGGAATGGGTGAATTCC
TTCATGAGGCTCCTCTTTGGTCGTTGGGAGTGCCCGATTCTTGCGGATAT
ATCGGATTAAACTACTGTCGAATTGAAGTTATCCCCGTTTTTGCCAAGTG
GGGTGTGTGTGTCCCATCGGAATGTACGTCTGAAGATATAAAGACAGCCA
TCTTTCCTCCGATAACCCAGCAATTGGCCGACAGGGTCAAAACGGCCTGC
GGAGCCATGACGGCTGACAAGGCTCTCTTCTTCACCGTTGAGCCCATCAG
TGTCGCAGCGTGGTCTGCGCTCATGCTGGTGCTGCTGCTGCTTCTGCTGG
CGCTGGGCGCGACGATCGTAGACGCGTACGGGCGAGAATGGAATCCTCGG
ATTTTTAAAAAGGATGGCGCTTTGCGAAGGGTTCTGATGTGTTTCTCACT
ATCAGGAAATTATCAAAGTCTGATGGCGCCGCCGCGTGGGGGGCCGTTCG
CGTCGTTTGAAGCGGTTCGGACGCTGGGCATGTGCATGATCCTGCTTGGC
CACACGCTGTGAATGGCCGCACCAGTTACCCCACCGGCGCCCTTGCCGCA
GCTTCCGCCGCCCTTCCTGCAGACCCTTGTTAAAAACCCCAACGTGTCAG
CGGCATGCGTTGCAGGTGCAAATGCTGTCCTTCAAAATACCCGCTTGGCC
CGACAAGCCGAATTCTTCTCAGGCCGCGTCACCGAAGGCCTCAGTCTAAT
CCTCCCCCCAGTTCTTAAAAAAGTCGTCCTCGCTCCCGATAAACGCGTTG
GAATGGGTGAATTCCTTCATGAGGCTCCTCTTTGGTCGTTGGGAGTGCCC
GATTCTTGCGGATATATCGGATTAAACTACTGTCGAATTGAAGTTATCCC
CGTTTTTGCCAAGTGGGGTGTGTGTGTCCCATCGGAATGTACGTCTGAAG
ATATAAAGACAGCCATCTTTCCTCCGATAACCCAGCAATTGGCCGACAGG
GTCAAAACGGCCTGCGGAGCCATGACGGCTGACAAGGCTCTCTTCTTCAC
CGTTGAGCCCATCAGTGTCGCAGCGTGGTCTGCGCTCATGCTGGTGCTGC
TGCTGCTTCTGCTGGCGCTGGGCGCGACGATCGTAGACGCGTACGGGCGA
GAATGGAATCCTCGGATTTTTAAAAAGGATGGCGCTTTGCGAAGGGTTCT
GATGTGTTTCTCACTATCAGGAAATTATCAAAGTCTGATGGCGCCGCCGC
GTGGGGGGCCGTTCGCGTCGTTTGAAGCGGTTCGGACGCTGGGCATGTGC
ATGATCCTGCTTGGCCACACGCTGTGAATGGCCGCACCAGTTACCCCACC
GGCGCCCTTGCCGCAGCTTCCGCCGCCCTTCCTGCAGACCCTTGTTAAAA
ACCCCAACGTGTCAGCGGCATGCGTTGCAG back to top
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