Properties
Property Name | Value |
TranscriptId | 584102 |
Track | FilteredModels2 |
ProteinId | 584016 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_7 | supercontig | scaffold_7:365741..369436 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2968 ID=mRNA_2968|Name=jgi.p|Nanoce1779_2|584016|organism=Nannochloropsis oceanica|type=mRNA|length=3696bp GATGATGTGACGTCTTGTGTTCTGCTCTTTCCTCCTGTGCTTTGTACAGA AATCAGGCTGCTGCTCCTATGAGTCGGATGTACTTCACCCGTCAGGTGCT CGTCCATCCCCTTCAGCGCAATACAATAGATATTTGATTACCTTGTTGTA TCAATTGTCTCGCTTCTCTCTGTCCACACCCCACAGTCGACAAACGTCCC ACAGACGCCATGTGGCGTCTTGGGACGACCTCATTTGGGCGCATGCGCGT CTGCCTCTACCAGTACCACCGTCACCGGGGGGTCGGCATGTCGTCCATAT CCCCTGGAGCAACACTCCGCTTTGCTCCGCAAACCGAGGCCAGCAACGCT GTAACCACTAAACGGCCACCGGGGGTGAATATTTATGGTGGTACCCTGGC GCAGCGTGAAAATGTAGCCCGTCGGCTCGCCCAGCTCCCTGAGTGGCATG CCAAGCTCGAGTACGAATCCCTTGCCATTTGTCTCTTGACAGATGGCCTC TTCCACGAGTCGGTGACCACGGAAGCTTCCACATACAACGAGCAGAGCGT CGGGCGTGCTTCGTCCTCCTCTACGGCATCTTCGGAAGCCCTTGCTGAAG CCTTTCTTAAGAGTGATTTGCAGGGCACTATCATGACCATTTTTCATGTG GCTTCCAATGAAAAGAAACAGCTTCAGAAAGCGCACGGAATGGAGGTGCT TCGTTCCTGGGCAAAGGACACGCTTCGCCAGCATTTGGCTTCGATGGGAA GCGTGGGAGCGACGGGACTGATTTTAGAGCCTGTGCTGATGGACCTGACG GAGCACAATTCGGATGAGGCACACGAGGATGATGCGATGCTGGCCAAAGC GTTGACTCAGAAAGTGTCACTCAAGACCACGGCCCTTCCTGGTACCTTAA TCCCGGCCAAGCACTGTAGCAAGCTGGTCTTACTCGTGTTTCCAAGGCGG GAGACGCGCCCTTCAGAGGGTTTGCACCGAGGTACGTTCATTCCCTTGTC CCCTTTCTCCTCCTTCCCGTCTCCCTCGAAGTCTTGTACTAGCTTTCTCC CCCAAAATGCCCATCATCGTTTCATTGAACTATTCTCTTGCTCATCTCCA TTCTCCATCCCTTTCGCTCTGCCTTTAGTCGAACGGCTTCTCCTTGATTA CTGCCGAAAGAACCTTATTTGCTTGCAGACGTACTATCTAGCCTTGGACT GTGCCTATTCGGCTGACGTGGCTGTGAGGGATGCTGAGGCTAAGCGGTAT CAAACGGTGGTGGCAGCGTTGCCTAAAGGCTCGCTGATCCTTGGGGAGGA GGCAGCCCTAGACGTATTGGTTGGCTGGACGGAGCAGGCCCGACTCCACG AAACTCTTCTCCGTCCCCTGCCTCGGGAGAAGGAAGATGAGATTATCCAA CATGCACCGGTGTCGTTGGATGTGGATATCTCGACGTTTTACATGTCTTT GATTAATTTCTTTTATGGGCCACCCACTGACGTTTTGGCGGGAAATCATC GTTTGGAGAACCTCGGGCCGCAAGACCTTATCTTGGTGACGGATGACGGA CATCACCCTTACGACGAGGGAGGCTACAGCGGTGGTGCTACCAGAGGAAT GATCGAGCGTACCAGGAGCAGCAGCAGTAGCAGTGGGAGAGGGAGTACCG GCGGCAGTGCCGGGGGAAAGGCGGCGATAAGTGGGGGTCCGTCCATAATG GCGGCATTGCGAGGGGAGAGACTGGCAGAAAGACTCCGTCCGCGGTTGGA AAAACGGTTCGGTCCAGGACAGGCCCCACAGGTTGTGTGTGGAGATCTTG AGAAGCAAGATTTGTCTCTTTATAGCTTAGTGCTGATTCATTCAGGCAAC CATCCCATTGAGCCGAACATATACAAGAAACGGCTAGATTTGTGTAAGAA CGCGGGAGTTGCTGTCACCACACCATCTCAGCTCAAGACATGGTTGCGCC GGCCATCCACATTGGCAACGGTCCTGAAGGTCTGGCCTCGGTCGTTCAAG GCGCGAGTGTTGGGGGTTGGGGAGGAGGAAGGAGAAGAGGAGGAGAGGGC AAAGACCGATGTGGCCCTGGCGGTGGCTAAGGGAAGGCCTAACGGTGGAG GGAGTTGCGCAGGTGACGGCAGTGTGATTGATGCTGGGGAGGGGTCAGCA AGGGTGAGAAAGGTGAGACTGGCTGCGTTGAGCAATTCGAGTGGTGCAGT TGCGGATATGGCCAAGCCGGCAGCGGGCCCGTGGGAACACGGATTCCGGA AGACGGTCGGCAATATATGTGGGGAGTGTGACTCGTGGAGCTGCGGGCAG TGCACACGAAAACAGCAGGAGTATGGTGAGCGCCTCGGCAAATCTCATCA GCACGGGCTTGGTCTGGAGTGGCGTGATTTGTATTGATCTTTCCCCCACA ATAAAAGGTTTCCTTGTAGATGTGAGGAATCTTAGGAACACTGTGAATAA TTGTTATTTACAATTACTGCTACGGCGGCGATACAGCAGCCGCAAAGCAG CACAGGAGCTTTTGACTTACGAAAAGAAGTCATGCGATAGTTGAAAACGA GATATATATATTTCAGACGTAGCACAGCGTGCATGTACGTATTCAAGAAT GACATGGATACGAGAGGCCACAGATGGACAAGTAATCAAAATCAAGCAAT GAGACAGGAGATGTAAAAAGCACGAACAGCTGTACAAACTCAGAATTTGC CAACTTTGATCTTATTTCATTTTCTTGAAAAGGGGGAATCCAGAATCGTC AGGCCTCTCAAAGTTTACACCCACCTTATTTGCTTGATCCGCTGATTAAA GTATGTCCGTCATTCAGGCACAGTGCCTACGAGACAAGGGTCGTCTCCGA AGACCTGAGAAACAACAAGATAGAAAGAATAATGTGACATTGTTTCCTGA CAGGGAGTTAGAGGGGGAGGGGAGAGGGAGCCCGGGGGCCGATTCTGACA GAAAGTGGGCAATATATTTGTGATGCTTAAAGGCCTGTAGTGGTGACCTA TGGGTCGGAACGGGTTATTCCAGTCATCGACCCATCTGTTGTTTATTCTC TCGATTTCTAAAAAAATAATATTTTCAAAATGAAAGAAAAAAATTCTTCA TAGTTGAGAAACAAGTTTCTAGCCAAGCCATCTCCCTGCACGTGACGGGC GGTGTGTACAAGGCCTAAGTACAAATTCACCGCATCATGCTGATGTGTGA TAACTAGTGATTCCACTTTCATGTGGACGAGTCGCAGTCCACAATTTGAA CTTTGGTAAAGTTTAAAGATTGTAAAGGGTAAGGGAGTCAGGTTGGAGTT CTTCATCAAAAGGCTGCTGATGTCCTTCTTCCAGGGTGGGGAACAGGGGA GTACATCTCCATTGAAAAAAAAATCCTTCGTACCACTGGCGTGTGAGGTG TGGGGTTTAAGGTGGGGACTGTCGATGGTCGGGTAAGAGGGGACTTTGAC CATGGAGAAGATGGCGACACCTCTTGCTCCCGGGTCCTACGTGGAGCCCG AAAAGCAAAATGATCGGTTACCCTATTTTGCCGGGCCTTCATTGCTTCAT TAGTGCTCTTGCAAACATACTGTTAAAATGGTCCCACACGTCGTGTGTAA AAATGCGAGTATGCACGCCAGCGGGGCATTCGATGGCTCTCGCAGTCCGT GCCTCGAGACCCGATCTTTCTGGTGTATGGTGGTGGTAATGCGACG back to topprotein sequence of jgi.p|Nanoce1779_2|584016 >mRNA_2968-protein ID=mRNA_2968-protein|Name=jgi.p|Nanoce1779_2|584016|organism=Nannochloropsis oceanica|type=polypeptide|length=726bp MWRLGTTSFGRMRVCLYQYHRHRGVGMSSISPGATLRFAPQTEASNAVTT KRPPGVNIYGGTLAQRENVARRLAQLPEWHAKLEYESLAICLLTDGLFHE SVTTEASTYNEQSVGRASSSSTASSEALAEAFLKSDLQGTIMTIFHVASN EKKQLQKAHGMEVLRSWAKDTLRQHLASMGSVGATGLILEPVLMDLTEHN SDEAHEDDAMLAKALTQKVSLKTTALPGTLIPAKHCSKLVLLVFPRRETR PSEGLHRGTFIPLSPFSSFPSPSKSCTSFLPQNAHHRFIELFSCSSPFSI PFALPLVERLLLDYCRKNLICLQTYYLALDCAYSADVAVRDAEAKRYQTV VAALPKGSLILGEEAALDVLVGWTEQARLHETLLRPLPREKEDEIIQHAP VSLDVDISTFYMSLINFFYGPPTDVLAGNHRLENLGPQDLILVTDDGHHP YDEGGYSGGATRGMIERTRSSSSSSGRGSTGGSAGGKAAISGGPSIMAAL RGERLAERLRPRLEKRFGPGQAPQVVCGDLEKQDLSLYSLVLIHSGNHPI EPNIYKKRLDLCKNAGVAVTTPSQLKTWLRRPSTLATVLKVWPRSFKARV LGVGEEEGEEEERAKTDVALAVAKGRPNGGGSCAGDGSVIDAGEGSARVR KVRLAALSNSSGAVADMAKPAAGPWEHGFRKTVGNICGECDSWSCGQCTR KQQEYGERLGKSHQHGLGLEWRDLY* back to topmRNA from alignment at scaffold_7:365741..369436- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2968 ID=mRNA_2968|Name=jgi.p|Nanoce1779_2|584016|organism=Nannochloropsis oceanica|type=mRNA|length=3696bp|location=Sequence derived from alignment at scaffold_7:365741..369436- (Nannochloropsis oceanica) GATGATGTGACGTCTTGTGTTCTGCTCTTTCCTCCTGTGCTTTGTACAGA
AATCAGGCTGCTGCTCCTATGAGTCGGATGTACTTCACCCGTCAGGTGCT
CGTCCATCCCCTTCAGCGCAATACAATAGATATTTGATTACCTTGTTGTA
TCAATTGTCTCGCTTCTCTCTGTCCACACCCCACAGTCGACAAACGTCCC
ACAGACGCCATGTGGCGTCTTGGGACGACCTCATTTGGGCGCATGCGCGT
CTGCCTCTACCAGTACCACCGTCACCGGGGGGTCGGCATGTCGTCCATAT
CCCCTGGAGCAACACTCCGCTTTGCTCCGCAAACCGAGGCCAGCAACGCT
GTAACCACTAAACGGCCACCGGGGGTGAATATTTATGGTGGTACCCTGGC
GCAGCGTGAAAATGTAGCCCGTCGGCTCGCCCAGCTCCCTGAGTGGCATG
CCAAGCTCGAGTACGAATCCCTTGCCATTTGTCTCTTGACAGATGGCCTC
TTCCACGAGTCGGTGACCACGGAAGCTTCCACATACAACGAGCAGAGCGT
CGGGCGTGCTTCGTCCTCCTCTACGGCATCTTCGGAAGCCCTTGCTGAAG
CCTTTCTTAAGAGTGATTTGCAGGGCACTATCATGACCATTTTTCATGTG
GCTTCCAATGAAAAGAAACAGCTTCAGAAAGCGCACGGAATGGAGGTGCT
TCGTTCCTGGGCAAAGGACACGCTTCGCCAGCATTTGGCTTCGATGGGAA
GCGTGGGAGCGACGGGACTGATTTTAGAGCCTGTGCTGATGGACCTGACG
GAGCACAATTCGGATGAGGCACACGAGGATGATGCGATGCTGGCCAAAGC
GTTGACTCAGAAAGTGTCACTCAAGACCACGGCCCTTCCTGGTACCTTAA
TCCCGGCCAAGCACTGTAGCAAGCTGGTCTTACTCGTGTTTCCAAGGCGG
GAGACGCGCCCTTCAGAGGGTTTGCACCGAGGTACGTTCATTCCCTTGTC
CCCTTTCTCCTCCTTCCCGTCTCCCTCGAAGTCTTGTACTAGCTTTCTCC
CCCAAAATGCCCATCATCGTTTCATTGAACTATTCTCTTGCTCATCTCCA
TTCTCCATCCCTTTCGCTCTGCCTTTAGTCGAACGGCTTCTCCTTGATTA
CTGCCGAAAGAACCTTATTTGCTTGCAGACGTACTATCTAGCCTTGGACT
GTGCCTATTCGGCTGACGTGGCTGTGAGGGATGCTGAGGCTAAGCGGTAT
CAAACGGTGGTGGCAGCGTTGCCTAAAGGCTCGCTGATCCTTGGGGAGGA
GGCAGCCCTAGACGTATTGGTTGGCTGGACGGAGCAGGCCCGACTCCACG
AAACTCTTCTCCGTCCCCTGCCTCGGGAGAAGGAAGATGAGATTATCCAA
CATGCACCGGTGTCGTTGGATGTGGATATCTCGACGTTTTACATGTCTTT
GATTAATTTCTTTTATGGGCCACCCACTGACGTTTTGGCGGGAAATCATC
GTTTGGAGAACCTCGGGCCGCAAGACCTTATCTTGGTGACGGATGACGGA
CATCACCCTTACGACGAGGGAGGCTACAGCGGTGGTGCTACCAGAGGAAT
GATCGAGCGTACCAGGAGCAGCAGCAGTAGCAGTGGGAGAGGGAGTACCG
GCGGCAGTGCCGGGGGAAAGGCGGCGATAAGTGGGGGTCCGTCCATAATG
GCGGCATTGCGAGGGGAGAGACTGGCAGAAAGACTCCGTCCGCGGTTGGA
AAAACGGTTCGGTCCAGGACAGGCCCCACAGGTTGTGTGTGGAGATCTTG
AGAAGCAAGATTTGTCTCTTTATAGCTTAGTGCTGATTCATTCAGGCAAC
CATCCCATTGAGCCGAACATATACAAGAAACGGCTAGATTTGTGTAAGAA
CGCGGGAGTTGCTGTCACCACACCATCTCAGCTCAAGACATGGTTGCGCC
GGCCATCCACATTGGCAACGGTCCTGAAGGTCTGGCCTCGGTCGTTCAAG
GCGCGAGTGTTGGGGGTTGGGGAGGAGGAAGGAGAAGAGGAGGAGAGGGC
AAAGACCGATGTGGCCCTGGCGGTGGCTAAGGGAAGGCCTAACGGTGGAG
GGAGTTGCGCAGGTGACGGCAGTGTGATTGATGCTGGGGAGGGGTCAGCA
AGGGTGAGAAAGGTGAGACTGGCTGCGTTGAGCAATTCGAGTGGTGCAGT
TGCGGATATGGCCAAGCCGGCAGCGGGCCCGTGGGAACACGGATTCCGGA
AGACGGTCGGCAATATATGTGGGGAGTGTGACTCGTGGAGCTGCGGGCAG
TGCACACGAAAACAGCAGGAGTATGGTGAGCGCCTCGGCAAATCTCATCA
GCACGGGCTTGGTCTGGAGTGGCGTGATTTGTATTGATCTTTCCCCCACA
ATAAAAGGTTTCCTTGTAGATGTGAGGAATCTTAGGAACACTGTGAATAA
TTGTTATTTACAATTACTGCTACGGCGGCGATACAGCAGCCGCAAAGCAG
CACAGGAGCTTTTGACTTACGAAAAGAAGTCATGCGATAGTTGAAAACGA
GATATATATATTTCAGACGTAGCACAGCGTGCATGTACGTATTCAAGAAT
GACATGGATACGAGAGGCCACAGATGGACAAGTAATCAAAATCAAGCAAT
GAGACAGGAGATGTAAAAAGCACGAACAGCTGTACAAACTCAGAATTTGC
CAACTTTGATCTTATTTCATTTTCTTGAAAAGGGGGAATCCAGAATCGTC
AGGCCTCTCAAAGTTTACACCCACCTTATTTGCTTGATCCGCTGATTAAA
GTATGTCCGTCATTCAGGCACAGTGCCTACGAGACAAGGGTCGTCTCCGA
AGACCTGAGAAACAACAAGATAGAAAGAATAATGTGACATTGTTTCCTGA
CAGGGAGTTAGAGGGGGAGGGGAGAGGGAGCCCGGGGGCCGATTCTGACA
GAAAGTGGGCAATATATTTGTGATGCTTAAAGGCCTGTAGTGGTGACCTA
TGGGTCGGAACGGGTTATTCCAGTCATCGACCCATCTGTTGTTTATTCTC
TCGATTTCTAAAAAAATAATATTTTCAAAATGAAAGAAAAAAATTCTTCA
TAGTTGAGAAACAAGTTTCTAGCCAAGCCATCTCCCTGCACGTGACGGGC
GGTGTGTACAAGGCCTAAGTACAAATTCACCGCATCATGCTGATGTGTGA
TAACTAGTGATTCCACTTTCATGTGGACGAGTCGCAGTCCACAATTTGAA
CTTTGGTAAAGTTTAAAGATTGTAAAGGGTAAGGGAGTCAGGTTGGAGTT
CTTCATCAAAAGGCTGCTGATGTCCTTCTTCCAGGGTGGGGAACAGGGGA
GTACATCTCCATTGAAAAAAAAATCCTTCGTACCACTGGCGTGTGAGGTG
TGGGGTTTAAGGTGGGGACTGTCGATGGTCGGGTAAGAGGGGACTTTGAC
CATGGAGAAGATGGCGACACCTCTTGCTCCCGGGTCCTACGTGGAGCCCG
AAAAGCAAAATGATCGGTTACCCTATTTTGCCGGGCCTTCATTGCTTCAT
TAGTGCTCTTGCAAACATACTGTTAAAATGGTCCCACACGTCGTGTGTAA
AAATGCGAGTATGCACGCCAGCGGGGCATTCGATGGCTCTCGCAGTCCGT
GCCTCGAGACCCGATCTTTCTGGTGTATGGTGGTGGTAATGCGACG back to topCoding sequence (CDS) from alignment at scaffold_7:365741..369436- >mRNA_2968 ID=mRNA_2968|Name=jgi.p|Nanoce1779_2|584016|organism=Nannochloropsis oceanica|type=CDS|length=2178bp|location=Sequence derived from alignment at scaffold_7:365741..369436- (Nannochloropsis oceanica) ATGTGGCGTCTTGGGACGACCTCATTTGGGCGCATGCGCGTCTGCCTCTA CCAGTACCACCGTCACCGGGGGGTCGGCATGTCGTCCATATCCCCTGGAG CAACACTCCGCTTTGCTCCGCAAACCGAGGCCAGCAACGCTGTAACCACT AAACGGCCACCGGGGGTGAATATTTATGGTGGTACCCTGGCGCAGCGTGA AAATGTAGCCCGTCGGCTCGCCCAGCTCCCTGAGTGGCATGCCAAGCTCG AGTACGAATCCCTTGCCATTTGTCTCTTGACAGATGGCCTCTTCCACGAG TCGGTGACCACGGAAGCTTCCACATACAACGAGCAGAGCGTCGGGCGTGC TTCGTCCTCCTCTACGGCATCTTCGGAAGCCCTTGCTGAAGCCTTTCTTA AGAGTGATTTGCAGGGCACTATCATGACCATTTTTCATGTGGCTTCCAAT GAAAAGAAACAGCTTCAGAAAGCGCACGGAATGGAGGTGCTTCGTTCCTG GGCAAAGGACACGCTTCGCCAGCATTTGGCTTCGATGGGAAGCGTGGGAG CGACGGGACTGATTTTAGAGCCTGTGCTGATGGACCTGACGGAGCACAAT TCGGATGAGGCACACGAGGATGATGCGATGCTGGCCAAAGCGTTGACTCA GAAAGTGTCACTCAAGACCACGGCCCTTCCTGGTACCTTAATCCCGGCCA AGCACTGTAGCAAGCTGGTCTTACTCGTGTTTCCAAGGCGGGAGACGCGC CCTTCAGAGGGTTTGCACCGAGGTACGTTCATTCCCTTGTCCCCTTTCTC CTCCTTCCCGTCTCCCTCGAAGTCTTGTACTAGCTTTCTCCCCCAAAATG CCCATCATCGTTTCATTGAACTATTCTCTTGCTCATCTCCATTCTCCATC CCTTTCGCTCTGCCTTTAGTCGAACGGCTTCTCCTTGATTACTGCCGAAA GAACCTTATTTGCTTGCAGACGTACTATCTAGCCTTGGACTGTGCCTATT CGGCTGACGTGGCTGTGAGGGATGCTGAGGCTAAGCGGTATCAAACGGTG GTGGCAGCGTTGCCTAAAGGCTCGCTGATCCTTGGGGAGGAGGCAGCCCT AGACGTATTGGTTGGCTGGACGGAGCAGGCCCGACTCCACGAAACTCTTC TCCGTCCCCTGCCTCGGGAGAAGGAAGATGAGATTATCCAACATGCACCG GTGTCGTTGGATGTGGATATCTCGACGTTTTACATGTCTTTGATTAATTT CTTTTATGGGCCACCCACTGACGTTTTGGCGGGAAATCATCGTTTGGAGA ACCTCGGGCCGCAAGACCTTATCTTGGTGACGGATGACGGACATCACCCT TACGACGAGGGAGGCTACAGCGGTGGTGCTACCAGAGGAATGATCGAGCG TACCAGGAGCAGCAGCAGTAGCAGTGGGAGAGGGAGTACCGGCGGCAGTG CCGGGGGAAAGGCGGCGATAAGTGGGGGTCCGTCCATAATGGCGGCATTG CGAGGGGAGAGACTGGCAGAAAGACTCCGTCCGCGGTTGGAAAAACGGTT CGGTCCAGGACAGGCCCCACAGGTTGTGTGTGGAGATCTTGAGAAGCAAG ATTTGTCTCTTTATAGCTTAGTGCTGATTCATTCAGGCAACCATCCCATT GAGCCGAACATATACAAGAAACGGCTAGATTTGTGTAAGAACGCGGGAGT TGCTGTCACCACACCATCTCAGCTCAAGACATGGTTGCGCCGGCCATCCA CATTGGCAACGGTCCTGAAGGTCTGGCCTCGGTCGTTCAAGGCGCGAGTG TTGGGGGTTGGGGAGGAGGAAGGAGAAGAGGAGGAGAGGGCAAAGACCGA TGTGGCCCTGGCGGTGGCTAAGGGAAGGCCTAACGGTGGAGGGAGTTGCG CAGGTGACGGCAGTGTGATTGATGCTGGGGAGGGGTCAGCAAGGGTGAGA AAGGTGAGACTGGCTGCGTTGAGCAATTCGAGTGGTGCAGTTGCGGATAT GGCCAAGCCGGCAGCGGGCCCGTGGGAACACGGATTCCGGAAGACGGTCG GCAATATATGTGGGGAGTGTGACTCGTGGAGCTGCGGGCAGTGCACACGA AAACAGCAGGAGTATGGTGAGCGCCTCGGCAAATCTCATCAGCACGGGCT TGGTCTGGAGTGGCGTGATTTGTATTGA back to top
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