Properties
| Property Name | Value |
|---|
| TranscriptId | 584012 |
| Track | FilteredModels2 |
| ProteinId | 583926 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:324008..325116 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2948 ID=mRNA_2948|Name=jgi.p|Nanoce1779_2|583926|organism=Nannochloropsis oceanica|type=mRNA|length=694bp
AGACGACCGCTACGACCGAAGGAGGAGAAAACTCGCGGCTGCCAGCCGTT
TTTTGTCGAGTATCGGAGTGCAGTCTGCAGCAGCAGCAGTCAGCAGCCAT
GTTCCTCATGGACTGGGTTTACAGTGCTCTCTCCTACCTAGGTTTGTACC
ACAAGAGTGCCAAAATTCTGTTTTTGGGGCTTGACAATGCGGGGAAGACA
ACCTTGCTACATATGCTCAAGGAAAACCGGGTGCAAGTCCATCAGCCTAC
CATCCACCCCAACACGGACGAGCTCATTATCGGAAAGATTCGGTTTAAAA
CATTTGACTTGGGCGGGCACGAGACGGCACGTCGGCTATGGAAGGACTAC
CTGACGACGGTGGATGGGGTAGTGTTTATAGTGGATGCCTTGGACCAGGA
GCGCTTTCCCGAGGCCAAGCGGGAGTTGGATAGCCTCCTCACAAGCGATG
ATCTCGCCAACGTACCTTTCCTAGTTCTTGGAAATAAGATCGACGTTCCG
CGGGCCGTGTCAGAGGAACAGCTGCGTTACGCCCTAGGTCTGCAAAACAC
CTATGGGAAAGACTCGTCCGGCGGGGGAGAGAAGCAACCGGGCGTCCGGC
CCATTGAGCTGTACATGTGCTCCGTGATTAAGAGGATGGGCTACGCGGAT
GGGTTCAAATGGTTGGCACAGTTCCTGTAAAAAAGAGGAGGGTA back to topprotein sequence of jgi.p|Nanoce1779_2|583926 >mRNA_2948-protein ID=mRNA_2948-protein|Name=jgi.p|Nanoce1779_2|583926|organism=Nannochloropsis oceanica|type=polypeptide|length=194bp
MFLMDWVYSALSYLGLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQP
TIHPNTDELIIGKIRFKTFDLGGHETARRLWKDYLTTVDGVVFIVDALDQ
ERFPEAKRELDSLLTSDDLANVPFLVLGNKIDVPRAVSEEQLRYALGLQN
TYGKDSSGGGEKQPGVRPIELYMCSVIKRMGYADGFKWLAQFL* back to topmRNA from alignment at scaffold_7:324008..325116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2948 ID=mRNA_2948|Name=jgi.p|Nanoce1779_2|583926|organism=Nannochloropsis oceanica|type=mRNA|length=1109bp|location=Sequence derived from alignment at scaffold_7:324008..325116- (Nannochloropsis oceanica)
AGACGACCGCTACGACCGAAGGAGGAGAAAACTCGCGGCTGCCAGCCGTT
TTTTGTCGAGTATCGGAGTGCAGTCTGCAGCAGCAGCAGTCAGCAGCCAT
GTTCCTCATGGACTGGGTTTACAGTGCTCTCTCCTACCTAGGTACGCTTT
CTACGACTTCCTTATCTTGTTATCATGCAGGAGAGGGTGAAGCGTAGAAA
GGCTGCGACTCAAGGGGCGTTAATGGGGGCCACGCTCTTCGCTGTGTCCC
TTCGTTGCCCATCTCCTGCGCTGGCCTTTTTCCCACGCCTTCCTCTTGGC
TAGCCCTCCTACTTACTCACCCTTTCTTCATTTTCTTCATTTCTTCATCT
AATTAGGTTTGTACCACAAGAGTGCCAAAATTCTGTTTTTGGGGCTTGAC
AATGCGGGGAAGACAACCTTGCTACATATGCTCAAGGAAAACCGGGTGCA
AGTCCATCAGCCTACCATCCACCCCAACACGGACGAGCTCATTATCGGAA
AGATTCGGTTTAAAACATTTGACTTGGGCGGGCACGAGACGGCACGTCGG
CTATGGAAGGACTACCTGACGACGGTGGATGGGGTAGTGTTTATAGTGGA
TGCCTTGGACCAGGAGCGCTTTCCCGAGGCCAAGCGGGAGTTGGATGTAA
GTGGCCCGTAGATAGGGGAGAAATGTGAAGATGGAGGAGTGTGCGTGTGC
CAGAGACAATATTCTCGTTTGTCGGATTTGTGGGCGTCTCGGGGTGGGGA
CGGGGGGGAAAGGGGTTGCATCGTGTTCATGCATTCGAGTGATTCTCACC
TTTTTTTTCCTTCCCTCCTGGCATCCTCCCCCACTGACCACGACAGAGCC
TCCTCACAAGCGATGATCTCGCCAACGTACCTTTCCTAGTTCTTGGAAAT
AAGATCGACGTTCCGCGGGCCGTGTCAGAGGAACAGCTGCGTTACGCCCT
AGGTCTGCAAAACACCTATGGGAAAGACTCGTCCGGCGGGGGAGAGAAGC
AACCGGGCGTCCGGCCCATTGAGCTGTACATGTGCTCCGTGATTAAGAGG
ATGGGCTACGCGGATGGGTTCAAATGGTTGGCACAGTTCCTGTAAAAAAG
AGGAGGGTA back to topCoding sequence (CDS) from alignment at scaffold_7:324008..325116- >mRNA_2948 ID=mRNA_2948|Name=jgi.p|Nanoce1779_2|583926|organism=Nannochloropsis oceanica|type=CDS|length=1746bp|location=Sequence derived from alignment at scaffold_7:324008..325116- (Nannochloropsis oceanica)
AGCCTCCTCACAAGCGATGATCTCGCCAACGTACCTTTCCTAGTTCTTGG
AAATAAGATCGACGTTCCGCGGGCCGTGTCAGAGGAACAGCTGCGTTACG
CCCTAGGTCTGCAAAACACCTATGGGAAAGACTCGTCCGGCGGGGGAGAG
AAGCAACCGGGCGTCCGGCCCATTGAGCTGTACATGTGCTCCGTGATTAA
GAGGATGGGCTACGCGGATGGGTTCAAATGGTTGGCACAGTTCCTGTAAG
TTTGTACCACAAGAGTGCCAAAATTCTGTTTTTGGGGCTTGACAATGCGG
GGAAGACAACCTTGCTACATATGCTCAAGGAAAACCGGGTGCAAGTCCAT
CAGCCTACCATCCACCCCAACACGGACGAGCTCATTATCGGAAAGATTCG
GTTTAAAACATTTGACTTGGGCGGGCACGAGACGGCACGTCGGCTATGGA
AGGACTACCTGACGACGGTGGATGGGGTAGTGTTTATAGTGGATGCCTTG
GACCAGGAGCGCTTTCCCGAGGCCAAGCGGGAGTTGGATATGTTCCTCAT
GGACTGGGTTTACAGTGCTCTCTCCTACCTAGAGCCTCCTCACAAGCGAT
GATCTCGCCAACGTACCTTTCCTAGTTCTTGGAAATAAGATCGACGTTCC
GCGGGCCGTGTCAGAGGAACAGCTGCGTTACGCCCTAGGTCTGCAAAACA
CCTATGGGAAAGACTCGTCCGGCGGGGGAGAGAAGCAACCGGGCGTCCGG
CCCATTGAGCTGTACATGTGCTCCGTGATTAAGAGGATGGGCTACGCGGA
TGGGTTCAAATGGTTGGCACAGTTCCTGTAAGTTTGTACCACAAGAGTGC
CAAAATTCTGTTTTTGGGGCTTGACAATGCGGGGAAGACAACCTTGCTAC
ATATGCTCAAGGAAAACCGGGTGCAAGTCCATCAGCCTACCATCCACCCC
AACACGGACGAGCTCATTATCGGAAAGATTCGGTTTAAAACATTTGACTT
GGGCGGGCACGAGACGGCACGTCGGCTATGGAAGGACTACCTGACGACGG
TGGATGGGGTAGTGTTTATAGTGGATGCCTTGGACCAGGAGCGCTTTCCC
GAGGCCAAGCGGGAGTTGGATATGTTCCTCATGGACTGGGTTTACAGTGC
TCTCTCCTACCTAGAGCCTCCTCACAAGCGATGATCTCGCCAACGTACCT
TTCCTAGTTCTTGGAAATAAGATCGACGTTCCGCGGGCCGTGTCAGAGGA
ACAGCTGCGTTACGCCCTAGGTCTGCAAAACACCTATGGGAAAGACTCGT
CCGGCGGGGGAGAGAAGCAACCGGGCGTCCGGCCCATTGAGCTGTACATG
TGCTCCGTGATTAAGAGGATGGGCTACGCGGATGGGTTCAAATGGTTGGC
ACAGTTCCTGTAAGTTTGTACCACAAGAGTGCCAAAATTCTGTTTTTGGG
GCTTGACAATGCGGGGAAGACAACCTTGCTACATATGCTCAAGGAAAACC
GGGTGCAAGTCCATCAGCCTACCATCCACCCCAACACGGACGAGCTCATT
ATCGGAAAGATTCGGTTTAAAACATTTGACTTGGGCGGGCACGAGACGGC
ACGTCGGCTATGGAAGGACTACCTGACGACGGTGGATGGGGTAGTGTTTA
TAGTGGATGCCTTGGACCAGGAGCGCTTTCCCGAGGCCAAGCGGGAGTTG
GATATGTTCCTCATGGACTGGGTTTACAGTGCTCTCTCCTACCTAG back to top
|