Properties
| Property Name | Value |
|---|
| TranscriptId | 526149 |
| Track | FilteredModels2 |
| ProteinId | 526063 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:317808..318786 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2946 ID=mRNA_2946|Name=jgi.p|Nanoce1779_2|526063|organism=Nannochloropsis oceanica|type=mRNA|length=861bp
ATGTTTATCACACGGGCTTTGTCCGCGGTGATGGTTCTCATGGGGATGAC
CCTTTCCGTGGACGATTTCGCTCGGATAGGTGGTAGTAAACGGGTGGTAG
CCCTAGGATGGTGCGCACAATTTTCGATAATGCCAACTGTAGCTTTGTTG
ATGTCGCGGCTCTTTCGTCTTCCCCCACATTTGGCAGCTGGGGTCGTCCT
CGTTGGTTGCTGTCCAGGCGGCACCGCCTCTAACCTTGTCACCCTTCTCG
CCAACGCAGATGTCGCCCTCAGCATCAGCATGACAGCCGTCTCCACCCTT
ACTGCAGGGGTAATGACTCCCCTCCTCACCTCCCTTCTCTTGGGGTCCCT
TGTCCCCGTCGACACCACCGCCCTTCTTCGCACCACCTTGCAAGTCGTCC
TCCTCCCTGTCATCCTCGGCCTGCTTACCAACACCTACCTCCTGCCCTCT
CTCTCTCCCTCCCTCACCCATGCCCTCTCTCGGATCACCCCCGTTCTATC
CGGTTTGCTTGTTGCTGCAATCTGTGGTAAAGTAGTCGCGACAAATGCAG
GGGCAGTGGCACAAGCGGGCGTACCCTTGTTAGGAGCGATCGTGACGTTA
CATGTGTTTGGTTTCTTTTTTGGGTTTTTAATGGCGAGGCTTTTGGGCTT
TAATCGCCAAGTTGCCAAGACTGTGTCCATTGAAACGGGAATGCAAAATT
CAGCGCTCGCTGTGGTGCTGGCGCGGTCGAGTCTGCCGCACCCCCTGTCA
GGCTTGCCAGGTGCAGTCTCAGCAGTATGTCATTCGGTGTTGGGGAGTGT
GCTGGCGTGGGTCTGGAGTCGGGAGGCAGGCAAGAAGGGAGCGAAAGAAG
AGTGTGAGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|526063 >mRNA_2946-protein ID=mRNA_2946-protein|Name=jgi.p|Nanoce1779_2|526063|organism=Nannochloropsis oceanica|type=polypeptide|length=287bp
MFITRALSAVMVLMGMTLSVDDFARIGGSKRVVALGWCAQFSIMPTVALL
MSRLFRLPPHLAAGVVLVGCCPGGTASNLVTLLANADVALSISMTAVSTL
TAGVMTPLLTSLLLGSLVPVDTTALLRTTLQVVLLPVILGLLTNTYLLPS
LSPSLTHALSRITPVLSGLLVAAICGKVVATNAGAVAQAGVPLLGAIVTL
HVFGFFFGFLMARLLGFNRQVAKTVSIETGMQNSALAVVLARSSLPHPLS
GLPGAVSAVCHSVLGSVLAWVWSREAGKKGAKEECE* back to topmRNA from alignment at scaffold_7:317808..318786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2946 ID=mRNA_2946|Name=jgi.p|Nanoce1779_2|526063|organism=Nannochloropsis oceanica|type=mRNA|length=979bp|location=Sequence derived from alignment at scaffold_7:317808..318786- (Nannochloropsis oceanica)
ATGTTTATCACACGGGCTTTGTCCGCGGTGATGGTTCTCATGGGGATGAC
CCTTTCCGTGGACGATTTCGCTCGGATAGGTGGTAGTAAACGGGTGGTAG
CCCTAGGATGGTGCGCACAATTTTCGATAATGCCAACTGTAGCTTTGTTG
ATGTCGCGGCTCTTTCGTCTTCCCCCACATTTGGCAGCTGGGGTCGTCCT
CGTTGGTTAGTATGTGTCTTACCGGGAGCCATGCGGAGAGCGCTTCGTTT
ACTATTCGTACTTGTTTTTTCTTTACCCTTATCCTTCCTCCTTCCCTTCC
TCACTTCACAAACGACACTACAGGTTGCTGTCCAGGCGGCACCGCCTCTA
ACCTTGTCACCCTTCTCGCCAACGCAGATGTCGCCCTCAGCATCAGCATG
ACAGCCGTCTCCACCCTTACTGCAGGGGTAATGACTCCCCTCCTCACCTC
CCTTCTCTTGGGGTCCCTTGTCCCCGTCGACACCACCGCCCTTCTTCGCA
CCACCTTGCAAGTCGTCCTCCTCCCTGTCATCCTCGGCCTGCTTACCAAC
ACCTACCTCCTGCCCTCTCTCTCTCCCTCCCTCACCCATGCCCTCTCTCG
GATCACCCCCGTTCTATCCGGTTTGCTTGTTGCTGCAATCTGTGGTAAAG
TAGTCGCGACAAATGCAGGGGCAGTGGCACAAGCGGGCGTACCCTTGTTA
GGAGCGATCGTGACGTTACATGTGTTTGGTTTCTTTTTTGGGTTTTTAAT
GGCGAGGCTTTTGGGCTTTAATCGCCAAGTTGCCAAGACTGTGTCCATTG
AAACGGGAATGCAAAATTCAGCGCTCGCTGTGGTGCTGGCGCGGTCGAGT
CTGCCGCACCCCCTGTCAGGCTTGCCAGGTGCAGTCTCAGCAGTATGTCA
TTCGGTGTTGGGGAGTGTGCTGGCGTGGGTCTGGAGTCGGGAGGCAGGCA
AGAAGGGAGCGAAAGAAGAGTGTGAGTGA back to topCoding sequence (CDS) from alignment at scaffold_7:317808..318786- >mRNA_2946 ID=mRNA_2946|Name=jgi.p|Nanoce1779_2|526063|organism=Nannochloropsis oceanica|type=CDS|length=1722bp|location=Sequence derived from alignment at scaffold_7:317808..318786- (Nannochloropsis oceanica)
GTTGCTGTCCAGGCGGCACCGCCTCTAACCTTGTCACCCTTCTCGCCAAC
GCAGATGTCGCCCTCAGCATCAGCATGACAGCCGTCTCCACCCTTACTGC
AGGGGTAATGACTCCCCTCCTCACCTCCCTTCTCTTGGGGTCCCTTGTCC
CCGTCGACACCACCGCCCTTCTTCGCACCACCTTGCAAGTCGTCCTCCTC
CCTGTCATCCTCGGCCTGCTTACCAACACCTACCTCCTGCCCTCTCTCTC
TCCCTCCCTCACCCATGCCCTCTCTCGGATCACCCCCGTTCTATCCGGTT
TGCTTGTTGCTGCAATCTGTGGTAAAGTAGTCGCGACAAATGCAGGGGCA
GTGGCACAAGCGGGCGTACCCTTGTTAGGAGCGATCGTGACGTTACATGT
GTTTGGTTTCTTTTTTGGGTTTTTAATGGCGAGGCTTTTGGGCTTTAATC
GCCAAGTTGCCAAGACTGTGTCCATTGAAACGGGAATGCAAAATTCAGCG
CTCGCTGTGGTGCTGGCGCGGTCGAGTCTGCCGCACCCCCTGTCAGGCTT
GCCAGGTGCAGTCTCAGCAGTATGTCATTCGGTGTTGGGGAGTGTGCTGG
CGTGGGTCTGGAGTCGGGAGGCAGGCAAGAAGGGAGCGAAAGAAGAGTGT
GAGTGAATGTTTATCACACGGGCTTTGTCCGCGGTGATGGTTCTCATGGG
GATGACCCTTTCCGTGGACGATTTCGCTCGGATAGGTGGTAGTAAACGGG
TGGTAGCCCTAGGATGGTGCGCACAATTTTCGATAATGCCAACTGTAGCT
TTGTTGATGTCGCGGCTCTTTCGTCTTCCCCCACATTTGGCAGCTGGGGT
CGTCCTCGTTGGTTGCTGTCCAGGCGGCACCGCCTCTAACCTTGTCACCC
TTCTCGCCAACGCAGATGTCGCCCTCAGCATCAGCATGACAGCCGTCTCC
ACCCTTACTGCAGGGGTAATGACTCCCCTCCTCACCTCCCTTCTCTTGGG
GTCCCTTGTCCCCGTCGACACCACCGCCCTTCTTCGCACCACCTTGCAAG
TCGTCCTCCTCCCTGTCATCCTCGGCCTGCTTACCAACACCTACCTCCTG
CCCTCTCTCTCTCCCTCCCTCACCCATGCCCTCTCTCGGATCACCCCCGT
TCTATCCGGTTTGCTTGTTGCTGCAATCTGTGGTAAAGTAGTCGCGACAA
ATGCAGGGGCAGTGGCACAAGCGGGCGTACCCTTGTTAGGAGCGATCGTG
ACGTTACATGTGTTTGGTTTCTTTTTTGGGTTTTTAATGGCGAGGCTTTT
GGGCTTTAATCGCCAAGTTGCCAAGACTGTGTCCATTGAAACGGGAATGC
AAAATTCAGCGCTCGCTGTGGTGCTGGCGCGGTCGAGTCTGCCGCACCCC
CTGTCAGGCTTGCCAGGTGCAGTCTCAGCAGTATGTCATTCGGTGTTGGG
GAGTGTGCTGGCGTGGGTCTGGAGTCGGGAGGCAGGCAAGAAGGGAGCGA
AAGAAGAGTGTGAGTGAATGTTTATCACACGGGCTTTGTCCGCGGTGATG
GTTCTCATGGGGATGACCCTTTCCGTGGACGATTTCGCTCGGATAGGTGG
TAGTAAACGGGTGGTAGCCCTAGGATGGTGCGCACAATTTTCGATAATGC
CAACTGTAGCTTTGTTGATGTCGCGGCTCTTTCGTCTTCCCCCACATTTG
GCAGCTGGGGTCGTCCTCGTTG back to top
|