Properties
| Property Name | Value |
|---|
| TranscriptId | 584000 |
| Track | FilteredModels2 |
| ProteinId | 583914 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:315103..316565 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2944 ID=mRNA_2944|Name=jgi.p|Nanoce1779_2|583914|organism=Nannochloropsis oceanica|type=mRNA|length=1463bp
TCCGTATTGCACGTGTTTTCTGTGATGGCAATGGTGCCGGTGACACTTGA
GTAATGTGGTTGTAATGGAGTGGTGGACAAGAGCAAGAGGAGGGTGGCCG
CCCGCACAGGGTCGCCGAAATACGAAAAAACGCGACCGTAAGAGACGATC
GTAAAAAACGCATGTCTCCAAGTCACGATCTTGAGTGCATCTACACGCTA
TCAACATCTGCACATCATTGATTGATTCATGGGTTGATTCATTCATCCGC
AGCCGTGGCACTTCCAACCTCCCCACCCCTCACACTAATGACAGAGCGGA
TGCCTCGCCTGCTTCAGGCTTTGTTGATGCTGTTGTTGTGCTCGAGCATT
GCCGGTTTTACGAGTCATCGCTTCGTCTCGGCCGCCGCATCCAAGGTCTG
TAGGGAAAAGGAAGACGTGGTCTTGTCGCCAATAGAACTCAATTAGACGC
CGCCGTACTGAACGTTACCCGCCTGTCTGGGACAGAATGCTGTTAAGTCT
TGCTTGAGATCCTCAACTTTATTTCATGTCACTATAATCGTCTAGGACTC
TATTTTTGGTCTCTGGGGCCTTCCATCGCCCCAGCAATGTCTCAATTCTT
CTACTTCCCCACGAACACAGGTTGCCGTCATAAGGCGCCGCTACGCCTCT
TCGAGATCTACAACAACCACTATGATGTCCCCTGTCCTGGCCAAGCGGCC
GAATTTGTATGTATACGATCATTGCCCTTTCTGCGTTCGTGCACGTATGA
TTTTTGGTTTGAAACAGGTACCGCATCAACTCATCTTTTTGGACAACGAT
GATATTGAGACACCAACGGCGTTGGTGGGGAAGAAAGTGGTGCCTATATT
AGAGATGGTGAACACGGAGGGAAAGACGGTGGTGATGCCCGAATCGATGG
ATATCGTGAAGTACGTCGATGGAGACTCTCGCTGGGGGAAACCATTACTC
AAGCCCGCGACCAACAGGGAGGATATCAAGGCTTTTTTTGATTCAATTGC
TGATTTGAGCCGACGGTGTACACGTCCGAGGTTTGCACTGTCAAGCATTT
TGCCTGAATTCCATACGCCTGCCGCAAGGGCTGCGTTTGTGAGGAACCAC
CCTTTCAAAACAGGTCCCTTTGATTACACAGAAAATTTGATGAATACTAA
ATTAGTGTCTGATCTGGGCGAGAAACTCAAGGATCTGGACGGGCTGATAT
TTTCGGCAGATTGCGTGACTGAGGGAGGGATGTCGTACGATGACATCGAT
GTGTTTGGGAAGACAAGGGGATTGACGGTAGTAAAAGGTTTGGTGTTGCC
TCCCAAGCTGAAGGCGTACTTGGAACGAATGGCGGAAAAGACTGAGATCC
CTTTGTATCATCAGATGGGGCTGTAAAGGGAGTGGGGTGGGGGGGGATAA
GGGAATAGGGGATATGCATTGATGGAGGGAAAATGGAGGGTATTGCAAGC
AAACCAAACAACA back to topprotein sequence of jgi.p|Nanoce1779_2|583914 >mRNA_2944-protein ID=mRNA_2944-protein|Name=jgi.p|Nanoce1779_2|583914|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MMSPVLAKRPNLYVYDHCPFCVRARMIFGLKQVPHQLIFLDNDDIETPTA
LVGKKVVPILEMVNTEGKTVVMPESMDIVKYVDGDSRWGKPLLKPATNRE
DIKAFFDSIADLSRRCTRPRFALSSILPEFHTPAARAAFVRNHPFKTGPF
DYTENLMNTKLVSDLGEKLKDLDGLIFSADCVTEGGMSYDDIDVFGKTRG
LTVVKGLVLPPKLKAYLERMAEKTEIPLYHQMGL* back to topmRNA from alignment at scaffold_7:315103..316565- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2944 ID=mRNA_2944|Name=jgi.p|Nanoce1779_2|583914|organism=Nannochloropsis oceanica|type=mRNA|length=1463bp|location=Sequence derived from alignment at scaffold_7:315103..316565- (Nannochloropsis oceanica)
TCCGTATTGCACGTGTTTTCTGTGATGGCAATGGTGCCGGTGACACTTGA
GTAATGTGGTTGTAATGGAGTGGTGGACAAGAGCAAGAGGAGGGTGGCCG
CCCGCACAGGGTCGCCGAAATACGAAAAAACGCGACCGTAAGAGACGATC
GTAAAAAACGCATGTCTCCAAGTCACGATCTTGAGTGCATCTACACGCTA
TCAACATCTGCACATCATTGATTGATTCATGGGTTGATTCATTCATCCGC
AGCCGTGGCACTTCCAACCTCCCCACCCCTCACACTAATGACAGAGCGGA
TGCCTCGCCTGCTTCAGGCTTTGTTGATGCTGTTGTTGTGCTCGAGCATT
GCCGGTTTTACGAGTCATCGCTTCGTCTCGGCCGCCGCATCCAAGGTCTG
TAGGGAAAAGGAAGACGTGGTCTTGTCGCCAATAGAACTCAATTAGACGC
CGCCGTACTGAACGTTACCCGCCTGTCTGGGACAGAATGCTGTTAAGTCT
TGCTTGAGATCCTCAACTTTATTTCATGTCACTATAATCGTCTAGGACTC
TATTTTTGGTCTCTGGGGCCTTCCATCGCCCCAGCAATGTCTCAATTCTT
CTACTTCCCCACGAACACAGGTTGCCGTCATAAGGCGCCGCTACGCCTCT
TCGAGATCTACAACAACCACTATGATGTCCCCTGTCCTGGCCAAGCGGCC
GAATTTGTATGTATACGATCATTGCCCTTTCTGCGTTCGTGCACGTATGA
TTTTTGGTTTGAAACAGGTACCGCATCAACTCATCTTTTTGGACAACGAT
GATATTGAGACACCAACGGCGTTGGTGGGGAAGAAAGTGGTGCCTATATT
AGAGATGGTGAACACGGAGGGAAAGACGGTGGTGATGCCCGAATCGATGG
ATATCGTGAAGTACGTCGATGGAGACTCTCGCTGGGGGAAACCATTACTC
AAGCCCGCGACCAACAGGGAGGATATCAAGGCTTTTTTTGATTCAATTGC
TGATTTGAGCCGACGGTGTACACGTCCGAGGTTTGCACTGTCAAGCATTT
TGCCTGAATTCCATACGCCTGCCGCAAGGGCTGCGTTTGTGAGGAACCAC
CCTTTCAAAACAGGTCCCTTTGATTACACAGAAAATTTGATGAATACTAA
ATTAGTGTCTGATCTGGGCGAGAAACTCAAGGATCTGGACGGGCTGATAT
TTTCGGCAGATTGCGTGACTGAGGGAGGGATGTCGTACGATGACATCGAT
GTGTTTGGGAAGACAAGGGGATTGACGGTAGTAAAAGGTTTGGTGTTGCC
TCCCAAGCTGAAGGCGTACTTGGAACGAATGGCGGAAAAGACTGAGATCC
CTTTGTATCATCAGATGGGGCTGTAAAGGGAGTGGGGTGGGGGGGGATAA
GGGAATAGGGGATATGCATTGATGGAGGGAAAATGGAGGGTATTGCAAGC
AAACCAAACAACA back to topCoding sequence (CDS) from alignment at scaffold_7:315103..316565- >mRNA_2944 ID=mRNA_2944|Name=jgi.p|Nanoce1779_2|583914|organism=Nannochloropsis oceanica|type=CDS|length=705bp|location=Sequence derived from alignment at scaffold_7:315103..316565- (Nannochloropsis oceanica)
ATGATGTCCCCTGTCCTGGCCAAGCGGCCGAATTTGTATGTATACGATCA
TTGCCCTTTCTGCGTTCGTGCACGTATGATTTTTGGTTTGAAACAGGTAC
CGCATCAACTCATCTTTTTGGACAACGATGATATTGAGACACCAACGGCG
TTGGTGGGGAAGAAAGTGGTGCCTATATTAGAGATGGTGAACACGGAGGG
AAAGACGGTGGTGATGCCCGAATCGATGGATATCGTGAAGTACGTCGATG
GAGACTCTCGCTGGGGGAAACCATTACTCAAGCCCGCGACCAACAGGGAG
GATATCAAGGCTTTTTTTGATTCAATTGCTGATTTGAGCCGACGGTGTAC
ACGTCCGAGGTTTGCACTGTCAAGCATTTTGCCTGAATTCCATACGCCTG
CCGCAAGGGCTGCGTTTGTGAGGAACCACCCTTTCAAAACAGGTCCCTTT
GATTACACAGAAAATTTGATGAATACTAAATTAGTGTCTGATCTGGGCGA
GAAACTCAAGGATCTGGACGGGCTGATATTTTCGGCAGATTGCGTGACTG
AGGGAGGGATGTCGTACGATGACATCGATGTGTTTGGGAAGACAAGGGGA
TTGACGGTAGTAAAAGGTTTGGTGTTGCCTCCCAAGCTGAAGGCGTACTT
GGAACGAATGGCGGAAAAGACTGAGATCCCTTTGTATCATCAGATGGGGC
TGTAA back to top
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