Properties
| Property Name | Value |
|---|
| TranscriptId | 629308 |
| Track | FilteredModels2 |
| ProteinId | 629222 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:299438..301413 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2936 ID=mRNA_2936|Name=jgi.p|Nanoce1779_2|629222|organism=Nannochloropsis oceanica|type=mRNA|length=1622bp
GGGGGAAGGGGGGAGGGGAGGGGAGGGCAATATGGCATCGGTGCTCGCAT
TGCGCTAAGCGTCGTCTAACAGACCTGCGCGTGGCAGGAAATGGCTTCGC
GTTGTACTTGAAGCCGTAACGCGGGTCCGAGCCTCGCATAAGTCGTGTCC
GCATTTACATTCAAGACGGAATATCGCCGAACCAACATGGTCCGCCTCGC
ATCTGCTGTCGACTCAACCTCCGCGCTACTGCACACAGGCAGAACGCTGG
CGGCGCTGCGGTACCTCGCCGTCCAGGCCCTCCGGCAACCCGCTCTAGCT
CCTTCCTCCTCGCGCGCACTCATGTCCGCTGCTTTTATTCCCTCCGCTTT
TTCTCCAGCGCGCCGCTTCCTTATCGACTGTGACCCCGGCGTCGACGATG
CTATTGCCATCATGATGGCCGTCAGTGAAGCCGCCCGACTCAGTGAACAA
ATTCTAGCCGTAACAACAGTGCATGGCAATGCGATGCTAGAGCAATGTGC
CAAGAATGCTGCCAAGGTACTCGACGTCCTCCCCGTGCAAACACCGCACT
TTGACTCCCGCCGCATCCCCGTCTATCGCGGCTGTGCCTCGCCTCTCCTT
CACAGCACTCACAAGTACTTCCCATGGCATGGACAGGATGGCCTTGGCGA
CGCCGGCCTTCCCGACGCCGATGCCCGCCACATAGAAACCGAGCATGCCA
CCTTGGCCATGATCCGGCTCTGCAAGCAATACCCCGGTGAAGTGACCTTG
GTCGCTTTGGGACCCTTGACGAACGTGGCACTGGCGTGTAAGCTCGACGA
GGGGTTTGCGAGTGCAGTAAAGGAGGTGGTGATAATGGGGGGAACGACGC
GGGCGAAGGGCAATGTCAGCCTGACCGGTGAATTCAACTTTCATAAGGAC
CCCGAAGCCGCCCATATTGTCCTCTCTGCCTTCTCCAAATCCACGCTGGT
CTCGTGGGAAACCACCGAGCAACATACAGTGGCCTGGGACGTCATGGAAG
ATTTCCTCACTCAAGCCGAAGGCTCGTGCTCGAGGCTTGGTACCTTTCTC
CGAGGGGTGACGCGTCCATTTATTCGAGATAAGGAGCGGTGGGCGGGTGC
ATTGATATGTGACGCGGTTGCCATGGCAGTGGCCCTGGACCCGGGCGTGG
TTACGAAATCGGCGGAGTGCTTTGTGGACGTAGAGTTGCAGGGGGCGTAT
GGGAGGGGGCAGACAGTGATTGATTGGGAGGGGCAGATGAGAGGGAAGGA
GGGGAAGGAGGCGAATGTGCGAGTGATAGAGTCGATTGACATGGCACGGA
TGCACGAGATGCTGCTTGGTATCGCCAAGACGGCAAGGGGGTAGCGAAGT
GAGGCCGAGTAAAGAGTTGCTCGGTGACGTACATGGAAAAGGAAGAAATG
ATGAAAGAGGAATGACAGCAGGGTGAGAGCTGAAGCTAGAGGGGGGGGGC
TGGGAAGCGGTGGGCGTGTAATAAAAATGAAAGAAAGCAAATGAAAGATG
CATGTTCCTACAAATTCTGTTGGGAATCGGACCCTCGGCACCCAGTGATA
TCTCTTGGGGGCATGGGCGCGTAATTCACTCCCGCCATACACACAAAAAT
CGACACCCTAAATAAGTTCATC back to topprotein sequence of jgi.p|Nanoce1779_2|629222 >mRNA_2936-protein ID=mRNA_2936-protein|Name=jgi.p|Nanoce1779_2|629222|organism=Nannochloropsis oceanica|type=polypeptide|length=386bp
MVRLASAVDSTSALLHTGRTLAALRYLAVQALRQPALAPSSSRALMSAAF
IPSAFSPARRFLIDCDPGVDDAIAIMMAVSEAARLSEQILAVTTVHGNAM
LEQCAKNAAKVLDVLPVQTPHFDSRRIPVYRGCASPLLHSTHKYFPWHGQ
DGLGDAGLPDADARHIETEHATLAMIRLCKQYPGEVTLVALGPLTNVALA
CKLDEGFASAVKEVVIMGGTTRAKGNVSLTGEFNFHKDPEAAHIVLSAFS
KSTLVSWETTEQHTVAWDVMEDFLTQAEGSCSRLGTFLRGVTRPFIRDKE
RWAGALICDAVAMAVALDPGVVTKSAECFVDVELQGAYGRGQTVIDWEGQ
MRGKEGKEANVRVIESIDMARMHEMLLGIAKTARG* back to topmRNA from alignment at scaffold_7:299438..301413- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2936 ID=mRNA_2936|Name=jgi.p|Nanoce1779_2|629222|organism=Nannochloropsis oceanica|type=mRNA|length=1976bp|location=Sequence derived from alignment at scaffold_7:299438..301413- (Nannochloropsis oceanica)
GGGGGAAGGGGGGAGGGGAGGGGAGGGCAATATGGCATCGGTGCTCGCAT
TGCGCTAAGCGTCGTCTAACAGACCTGCGCGTGGCAGGAAATGGCTTCGC
GTTGTACTTGAAGCCGTAACGCGGGTCCGAGCCTCGCATAAGTCGTGTCC
GCATTTACATTCAAGACGGAATATCGCCGAACCAACATGGTCCGCCTCGC
ATCTGCTGTCGACTCAACCTCCGCGCTACTGCACACAGGCAGAACGCTGG
CGGCGCTGCGGTACCTCGCCGTCCAGGCCCTCCGGCAACCCGCTCTAGCT
CCTTCCTCCTCGCGCGCACTCATGTCCGCTGCTTTTATTCCCTCCGCTTT
TTCTCCAGCGCGCCGCTTCCTTATCGACTGTGACCCCGGCGTCGACGATG
CTATTGCCATCATGATGGCCGTCAGTGAAGCCGCCCGACTCAGTGAACAA
ATTCTAGCCGTAACAACAGTGCATGGCAATGCGATGCTAGAGCAATGTGC
CAAGAATGCTGCCAAGGTACTCGACGTCCTCCCCGTGCAAACACCGCACT
TTGACTCCCGCCGCATCCCCGTCTATCGCGGCTGTGCCTCGCCTCTCCTT
CACAGCACTCACAAGTACTTCCCATGGCATGGGTATGTAAAAGAAATGTA
CACGATAGTGACCATGCTGTATATTGGCTTAATGGGGTATTTTCGCTCTT
GCAATATATAGACAGGATGGCCTTGGCGACGCCGGCCTTCCCGACGCCGA
TGCCCGCCACATAGAAACCGAGCATGCCACCTTGGCCATGATCCGGCTCT
GCAAGCAATACCCCGGTGAAGTGACCTTGGTCGCTTTGGGACCCTTGACG
AACGTGGCACTGGCGTGTAAGCTCGACGAGGGGTTTGCGAGTGCAGTAAA
GGAGGTGGTGATAATGGGGGGAACGACGCGGGCGAAGGGCAATGTCAGCC
TGACCGGTGAATTCAACTTTCATAAGGGTACGTCGGATTCTCCACGCCCG
GGATGGAGGAAGGAGAAGATATTTTAAATATAGGAGAGGAGAAGGTGACT
CATTAATTCATGTGACTCATCTATCATTACTACCGCCGACTGTCTCTACA
AACATTGACAGACCCCGAAGCCGCCCATATTGTCCTCTCTGCCTTCTCCA
AATCCACGCTGGTGCGTGGAAAGCTTTGTGTATTTGTTTGGATCTCTTTT
GCTTAGATGTTATTATCTTCTCCATTTTTGAAATATCGTCACAATTTGCC
TTATGGCTCAAATTCTCCCTCCCACCCTTCCTCTTTCCCTCCCCCCTCGC
AGGTCTCGTGGGAAACCACCGAGCAACATACAGTGGCCTGGGACGTCATG
GAAGATTTCCTCACTCAAGCCGAAGGCTCGTGCTCGAGGCTTGGTACCTT
TCTCCGAGGGGTGACGCGTCCATTTATTCGAGATAAGGAGCGGTGGGCGG
GTGCATTGATATGTGACGCGGTTGCCATGGCAGTGGCCCTGGACCCGGGC
GTGGTTACGAAATCGGCGGAGTGCTTTGTGGACGTAGAGTTGCAGGGGGC
GTATGGGAGGGGGCAGACAGTGATTGATTGGGAGGGGCAGATGAGAGGGA
AGGAGGGGAAGGAGGCGAATGTGCGAGTGATAGAGTCGATTGACATGGCA
CGGATGCACGAGATGCTGCTTGGTATCGCCAAGACGGCAAGGGGGTAGCG
AAGTGAGGCCGAGTAAAGAGTTGCTCGGTGACGTACATGGAAAAGGAAGA
AATGATGAAAGAGGAATGACAGCAGGGTGAGAGCTGAAGCTAGAGGGGGG
GGGCTGGGAAGCGGTGGGCGTGTAATAAAAATGAAAGAAAGCAAATGAAA
GATGCATGTTCCTACAAATTCTGTTGGGAATCGGACCCTCGGCACCCAGT
GATATCTCTTGGGGGCATGGGCGCGTAATTCACTCCCGCCATACACACAA
AAATCGACACCCTAAATAAGTTCATC back to topCoding sequence (CDS) from alignment at scaffold_7:299438..301413- >mRNA_2936 ID=mRNA_2936|Name=jgi.p|Nanoce1779_2|629222|organism=Nannochloropsis oceanica|type=CDS|length=4632bp|location=Sequence derived from alignment at scaffold_7:299438..301413- (Nannochloropsis oceanica)
GTCTCGTGGGAAACCACCGAGCAACATACAGTGGCCTGGGACGTCATGGA
AGATTTCCTCACTCAAGCCGAAGGCTCGTGCTCGAGGCTTGGTACCTTTC
TCCGAGGGGTGACGCGTCCATTTATTCGAGATAAGGAGCGGTGGGCGGGT
GCATTGATATGTGACGCGGTTGCCATGGCAGTGGCCCTGGACCCGGGCGT
GGTTACGAAATCGGCGGAGTGCTTTGTGGACGTAGAGTTGCAGGGGGCGT
ATGGGAGGGGGCAGACAGTGATTGATTGGGAGGGGCAGATGAGAGGGAAG
GAGGGGAAGGAGGCGAATGTGCGAGTGATAGAGTCGATTGACATGGCACG
GATGCACGAGATGCTGCTTGGTATCGCCAAGACGGCAAGGGGGTAGACCC
CGAAGCCGCCCATATTGTCCTCTCTGCCTTCTCCAAATCCACGCTGACAG
GATGGCCTTGGCGACGCCGGCCTTCCCGACGCCGATGCCCGCCACATAGA
AACCGAGCATGCCACCTTGGCCATGATCCGGCTCTGCAAGCAATACCCCG
GTGAAGTGACCTTGGTCGCTTTGGGACCCTTGACGAACGTGGCACTGGCG
TGTAAGCTCGACGAGGGGTTTGCGAGTGCAGTAAAGGAGGTGGTGATAAT
GGGGGGAACGACGCGGGCGAAGGGCAATGTCAGCCTGACCGGTGAATTCA
ACTTTCATAAGGATGGTCCGCCTCGCATCTGCTGTCGACTCAACCTCCGC
GCTACTGCACACAGGCAGAACGCTGGCGGCGCTGCGGTACCTCGCCGTCC
AGGCCCTCCGGCAACCCGCTCTAGCTCCTTCCTCCTCGCGCGCACTCATG
TCCGCTGCTTTTATTCCCTCCGCTTTTTCTCCAGCGCGCCGCTTCCTTAT
CGACTGTGACCCCGGCGTCGACGATGCTATTGCCATCATGATGGCCGTCA
GTGAAGCCGCCCGACTCAGTGAACAAATTCTAGCCGTAACAACAGTGCAT
GGCAATGCGATGCTAGAGCAATGTGCCAAGAATGCTGCCAAGGTACTCGA
CGTCCTCCCCGTGCAAACACCGCACTTTGACTCCCGCCGCATCCCCGTCT
ATCGCGGCTGTGCCTCGCCTCTCCTTCACAGCACTCACAAGTACTTCCCA
TGGCATGGGTCTCGTGGGAAACCACCGAGCAACATACAGTGGCCTGGGAC
GTCATGGAAGATTTCCTCACTCAAGCCGAAGGCTCGTGCTCGAGGCTTGG
TACCTTTCTCCGAGGGGTGACGCGTCCATTTATTCGAGATAAGGAGCGGT
GGGCGGGTGCATTGATATGTGACGCGGTTGCCATGGCAGTGGCCCTGGAC
CCGGGCGTGGTTACGAAATCGGCGGAGTGCTTTGTGGACGTAGAGTTGCA
GGGGGCGTATGGGAGGGGGCAGACAGTGATTGATTGGGAGGGGCAGATGA
GAGGGAAGGAGGGGAAGGAGGCGAATGTGCGAGTGATAGAGTCGATTGAC
ATGGCACGGATGCACGAGATGCTGCTTGGTATCGCCAAGACGGCAAGGGG
GTAGACCCCGAAGCCGCCCATATTGTCCTCTCTGCCTTCTCCAAATCCAC
GCTGACAGGATGGCCTTGGCGACGCCGGCCTTCCCGACGCCGATGCCCGC
CACATAGAAACCGAGCATGCCACCTTGGCCATGATCCGGCTCTGCAAGCA
ATACCCCGGTGAAGTGACCTTGGTCGCTTTGGGACCCTTGACGAACGTGG
CACTGGCGTGTAAGCTCGACGAGGGGTTTGCGAGTGCAGTAAAGGAGGTG
GTGATAATGGGGGGAACGACGCGGGCGAAGGGCAATGTCAGCCTGACCGG
TGAATTCAACTTTCATAAGGATGGTCCGCCTCGCATCTGCTGTCGACTCA
ACCTCCGCGCTACTGCACACAGGCAGAACGCTGGCGGCGCTGCGGTACCT
CGCCGTCCAGGCCCTCCGGCAACCCGCTCTAGCTCCTTCCTCCTCGCGCG
CACTCATGTCCGCTGCTTTTATTCCCTCCGCTTTTTCTCCAGCGCGCCGC
TTCCTTATCGACTGTGACCCCGGCGTCGACGATGCTATTGCCATCATGAT
GGCCGTCAGTGAAGCCGCCCGACTCAGTGAACAAATTCTAGCCGTAACAA
CAGTGCATGGCAATGCGATGCTAGAGCAATGTGCCAAGAATGCTGCCAAG
GTACTCGACGTCCTCCCCGTGCAAACACCGCACTTTGACTCCCGCCGCAT
CCCCGTCTATCGCGGCTGTGCCTCGCCTCTCCTTCACAGCACTCACAAGT
ACTTCCCATGGCATGGGTCTCGTGGGAAACCACCGAGCAACATACAGTGG
CCTGGGACGTCATGGAAGATTTCCTCACTCAAGCCGAAGGCTCGTGCTCG
AGGCTTGGTACCTTTCTCCGAGGGGTGACGCGTCCATTTATTCGAGATAA
GGAGCGGTGGGCGGGTGCATTGATATGTGACGCGGTTGCCATGGCAGTGG
CCCTGGACCCGGGCGTGGTTACGAAATCGGCGGAGTGCTTTGTGGACGTA
GAGTTGCAGGGGGCGTATGGGAGGGGGCAGACAGTGATTGATTGGGAGGG
GCAGATGAGAGGGAAGGAGGGGAAGGAGGCGAATGTGCGAGTGATAGAGT
CGATTGACATGGCACGGATGCACGAGATGCTGCTTGGTATCGCCAAGACG
GCAAGGGGGTAGACCCCGAAGCCGCCCATATTGTCCTCTCTGCCTTCTCC
AAATCCACGCTGACAGGATGGCCTTGGCGACGCCGGCCTTCCCGACGCCG
ATGCCCGCCACATAGAAACCGAGCATGCCACCTTGGCCATGATCCGGCTC
TGCAAGCAATACCCCGGTGAAGTGACCTTGGTCGCTTTGGGACCCTTGAC
GAACGTGGCACTGGCGTGTAAGCTCGACGAGGGGTTTGCGAGTGCAGTAA
AGGAGGTGGTGATAATGGGGGGAACGACGCGGGCGAAGGGCAATGTCAGC
CTGACCGGTGAATTCAACTTTCATAAGGATGGTCCGCCTCGCATCTGCTG
TCGACTCAACCTCCGCGCTACTGCACACAGGCAGAACGCTGGCGGCGCTG
CGGTACCTCGCCGTCCAGGCCCTCCGGCAACCCGCTCTAGCTCCTTCCTC
CTCGCGCGCACTCATGTCCGCTGCTTTTATTCCCTCCGCTTTTTCTCCAG
CGCGCCGCTTCCTTATCGACTGTGACCCCGGCGTCGACGATGCTATTGCC
ATCATGATGGCCGTCAGTGAAGCCGCCCGACTCAGTGAACAAATTCTAGC
CGTAACAACAGTGCATGGCAATGCGATGCTAGAGCAATGTGCCAAGAATG
CTGCCAAGGTACTCGACGTCCTCCCCGTGCAAACACCGCACTTTGACTCC
CGCCGCATCCCCGTCTATCGCGGCTGTGCCTCGCCTCTCCTTCACAGCAC
TCACAAGTACTTCCCATGGCATGGGTCTCGTGGGAAACCACCGAGCAACA
TACAGTGGCCTGGGACGTCATGGAAGATTTCCTCACTCAAGCCGAAGGCT
CGTGCTCGAGGCTTGGTACCTTTCTCCGAGGGGTGACGCGTCCATTTATT
CGAGATAAGGAGCGGTGGGCGGGTGCATTGATATGTGACGCGGTTGCCAT
GGCAGTGGCCCTGGACCCGGGCGTGGTTACGAAATCGGCGGAGTGCTTTG
TGGACGTAGAGTTGCAGGGGGCGTATGGGAGGGGGCAGACAGTGATTGAT
TGGGAGGGGCAGATGAGAGGGAAGGAGGGGAAGGAGGCGAATGTGCGAGT
GATAGAGTCGATTGACATGGCACGGATGCACGAGATGCTGCTTGGTATCG
CCAAGACGGCAAGGGGGTAGACCCCGAAGCCGCCCATATTGTCCTCTCTG
CCTTCTCCAAATCCACGCTGACAGGATGGCCTTGGCGACGCCGGCCTTCC
CGACGCCGATGCCCGCCACATAGAAACCGAGCATGCCACCTTGGCCATGA
TCCGGCTCTGCAAGCAATACCCCGGTGAAGTGACCTTGGTCGCTTTGGGA
CCCTTGACGAACGTGGCACTGGCGTGTAAGCTCGACGAGGGGTTTGCGAG
TGCAGTAAAGGAGGTGGTGATAATGGGGGGAACGACGCGGGCGAAGGGCA
ATGTCAGCCTGACCGGTGAATTCAACTTTCATAAGGATGGTCCGCCTCGC
ATCTGCTGTCGACTCAACCTCCGCGCTACTGCACACAGGCAGAACGCTGG
CGGCGCTGCGGTACCTCGCCGTCCAGGCCCTCCGGCAACCCGCTCTAGCT
CCTTCCTCCTCGCGCGCACTCATGTCCGCTGCTTTTATTCCCTCCGCTTT
TTCTCCAGCGCGCCGCTTCCTTATCGACTGTGACCCCGGCGTCGACGATG
CTATTGCCATCATGATGGCCGTCAGTGAAGCCGCCCGACTCAGTGAACAA
ATTCTAGCCGTAACAACAGTGCATGGCAATGCGATGCTAGAGCAATGTGC
CAAGAATGCTGCCAAGGTACTCGACGTCCTCCCCGTGCAAACACCGCACT
TTGACTCCCGCCGCATCCCCGTCTATCGCGGCTGTGCCTCGCCTCTCCTT
CACAGCACTCACAAGTACTTCCCATGGCATGG back to top
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