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Properties
Property Name | Value |
TranscriptId | 638196 |
Track | FilteredModels2 |
ProteinId | 638110 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_7 | supercontig | scaffold_7:293983..296211 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2934 ID=mRNA_2934|Name=jgi.p|Nanoce1779_2|638110|organism=Nannochloropsis oceanica|type=mRNA|length=1428bp ATGGTGGCGTGGAAGCGGCGGCTGCATGGTGCCGTCTGCGAGTTCTTCGA GGTAGACAAGCGGCATACCACCGTGGCCACCGAGGTCCGGGCGGGTATCA CCACATTTTTGACTATGAGCTACATTCTGCTTGTCAACCCTCAAATCTTG GCGCAGATAGGCTTCCCAAAATCCGACGTTGTGGTCGCCACCGCCGTGGG CGCCGGGCTCGCCAGCATGGTCTGTGGGATCTTTGGCAACTTGCCTTTTG GTCTTGCGCCTGGCACGGGCTTGAGCGCGTACCTATCTTATGGCCTCGTC CTCGCTGGGGTGCTCACTCGCCCGCAAGCGATGACGGTATGTTTTTTGTC GGGGTTTGCACTGGGCGTATCAGCCTTGGCGCAGGTTAGCACGGTCATTA TGAGGGTTATACCAAGAGCAGTAAAACTCGCGACAGTCGTGGGGATGGGC CTATTGATTGCATTAATTGGCATGGTGTCTATAAGGCTGGTGGTCCCGAA TGAAGATACGTTGGTGACGCTTGGGGATTTTTCGGACTACCATATATGGT TGGCGCTTGTGGGGTTGGTGGTGACAGGTTCAATGCTCTTCCACCAAGTA AAGGGTGGGGTGCTCGCGGGTATCGTCCTCATTACCGTTTTTGTCTGGTG TATGGATCATGACGGCCCCTCAGAGATCTTTTCCATCCCCCATCTGGAAT ACGGCGTCACGAGAAACATCGACTTGACGCCCGCTTCCTTATCCTGGGAA ATGCTCCCTCCATTGCTCGCGTTTTTATTTGTCGGTTTATTTGACATCTC GGGAGTGATGTTCGGGCTGTCGTCTCTCGCAAAGATAATGGAGGAGGATG GACATATACCGGGTAGTATTTGGGCGTTCTTAGGGTCGGGTTTAGGCACC TTGGTGGCAGCTATGGCCGGGAGTTCGCCCATCATCATCCACGTGGAAAG CGCGGCGGGGATCAGGGAAGGAGGAAGGACGGGATTGACGGCTGTTGTTG TAGGATTATTGTTTTTTTTGAGTTTATTTTTCGCGCCTTTATTTGGACAC GTCCCGACGGCGGCGACAGCACCAATTTTGATTCTGGTGGGGGCGATGAT GATAGGAGAGAGTCAGCACATCGACTGGGCGGACATGAGTCAGGCGATCC CGGCGTTTTTGACGAGCATGATGATGCCCTTCACGTTCTCGATCCCGAAT GGAATTTTGTTCGGGGTGGGGATGAGCGTGACGTTTTTTGAAGAGGCCGA CGAGCAGGCTGCCAGGGATATGGAGTTGTCGTCGTCGTTGACGCATGCGG GGGGAGGAGGGCACCATATGCTGAGTCACCAGCCACCGTATCACCGGCAT AGGAGTGGAAGTGGAAGCGGGAGCGATCGAAGTTCAGGCGGAGGGGCGGG GGAGGGGGCATTTGCGATGCAGATATAG back to topprotein sequence of jgi.p|Nanoce1779_2|638110 >mRNA_2934-protein ID=mRNA_2934-protein|Name=jgi.p|Nanoce1779_2|638110|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp MVAWKRRLHGAVCEFFEVDKRHTTVATEVRAGITTFLTMSYILLVNPQIL AQIGFPKSDVVVATAVGAGLASMVCGIFGNLPFGLAPGTGLSAYLSYGLV LAGVLTRPQAMTVCFLSGFALGVSALAQVSTVIMRVIPRAVKLATVVGMG LLIALIGMVSIRLVVPNEDTLVTLGDFSDYHIWLALVGLVVTGSMLFHQV KGGVLAGIVLITVFVWCMDHDGPSEIFSIPHLEYGVTRNIDLTPASLSWE MLPPLLAFLFVGLFDISGVMFGLSSLAKIMEEDGHIPGSIWAFLGSGLGT LVAAMAGSSPIIIHVESAAGIREGGRTGLTAVVVGLLFFLSLFFAPLFGH VPTAATAPILILVGAMMIGESQHIDWADMSQAIPAFLTSMMMPFTFSIPN GILFGVGMSVTFFEEADEQAARDMELSSSLTHAGGGGHHMLSHQPPYHRH RSGSGSGSDRSSGGGAGEGAFAMQI* back to topmRNA from alignment at scaffold_7:293983..296211+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2934 ID=mRNA_2934|Name=jgi.p|Nanoce1779_2|638110|organism=Nannochloropsis oceanica|type=mRNA|length=2229bp|location=Sequence derived from alignment at scaffold_7:293983..296211+ (Nannochloropsis oceanica) ATGGTGGCGTGGAAGCGGCGGCTGCATGGTGCCGTCTGCGAGTTCTTCGA
GGTAGACAAGCGGCATACCACCGTGGCCACCGAGGTCCGGGCGGGTATCA
CCACATTTTTGACTATGAGCTACATTCTGCTTGTCAACCCTCAAATCTTG
GCGCAGGTACGTTCGCAAGGGGTGGGGAGGTCTGGAAAGAGTCATCTGGC
GTTTGAGTATATATATGCCCCCTCTGGGCCTCTCATCCGGCTGATGCACA
AGCATGCTGACAACCACCGGTATTACCATTCCATGGATCGGCCGGGTCGT
GTGGGCATGTGTATTATCGTGAAATCCGCTGTTGCTGGTCCACGAGCGTA
AGTGCTTGTCAGCTCAATCCTGTATTCCTTCTTCATCACTCCACTTCCTC
GAATATTTTTGAATCGGACGTCGATGTTCGCGATCACATCCGTTCCGCTC
TCTCCATCGTTCTCCAGACCTCTCTTGACCCTCATGTCGTCTCTTCTTTT
TTTCAAAACCATCTTTAACAGATAGGCTTCCCAAAATCCGACGTTGTGGT
CGCCACCGCCGTGGGCGCCGGGCTCGCCAGCATGGTCTGTGGGATCTTTG
GCAACTTGCCTTTTGGTCTTGCGCCTGGCACGGGCTTGAGCGCGTACCTA
TCTTATGGCCTCGTCCTCGCTGGGGTGCTCACTCGCCCGCAAGCGATGAC
GGTATGTTTTTTGTCGGGGTTTGCACTGGGCGTATCAGCCTTGGCGCAGG
TTAGCACGGTCATTATGAGGGTTATACCAAGAGCAGTAAAACTCGCGACA
GTCGTGGGGATGGGCCTATTGATTGCATTAATTGGCATGGTGTCTATAAG
GCTGGTGGTCCCGAATGAAGATACGTTGGTGACGCTTGGGGATTTTTCGG
ACTACCATATATGGTTGGCGCTTGTGGGGTTGGTGGTGACAGGTAAGAGG
GGGGTAGAGGAATGAGGGAGGGAGCAAGGGAGGAAGGCATACACATTTTT
CCCACAATGCTTGGAGTTCACTTTCTTTCGTCTTCTTCCCTTACTCTCCC
TCCTTTTTCCAACAGGTTCAATGCTCTTCCACCAAGTAAAGGGTGGGGTG
CTCGCGGGTATCGTCCTCATTACCGTTTTTGTCTGGTGTATGGATCATGA
CGGCCCCTCAGAGATCTTTTCCATCCCCCATCTGGAATACGGCGTCACGA
GAAACATCGACTTGACGCCCGCTTCCTTATCCTGGGAAATGCTCCCTCCA
TTGCTCGCGTTTTTATTTGTCGGTTTATTTGACATCTCGGGAGTGATGTT
CGGGCTGTCGTCTCTCGCAAAGATAATGGAGGAGGATGGACATATACCGG
GTAGTATTTGGGCGTTCTTAGGGTCGGGTTTAGGCACCTTGGTGGCAGCT
ATGGCCGGGAGTTCGCCCATCATCATCCACGTGGAAAGCGCGGCGGGGAT
CAGGGAAGGAGGAAGGACGGGATTGACGGCTGTTGTTGTAGGATTATTGT
TTTTTTTGAGTTTATTTTTCGCGCCTTTATTTGGACACGTCCCGACGGCG
GCGACAGCACCAATTTTGATTCTGGTGGGGGCGATGATGATAGGAGAGAG
TCAGCACATCGACTGGGCGGACATGAGTCAGGCGATCCCGGCGTTTTTGA
CGAGCATGATGATGCCCTTCACGTTCTCGATCCCGAATGGAATTTTGTTC
GGGGTGGGGATGAGCGTGACGTTTTTTGTGACGACTGGCGAGTTCCTGAG
TTATTTGCCCCGGTGGATGTGGGGGGGGGGGGAGGGAGGGAATTGAGATA
GGAAAGGGTGGAGGGATGGTGGAAGAAGAGGAGCAGGCAAGGAGGTTGCA
GACAATTGATGAACGGAGTCGGTTAAAGGCGCCGCCTATACCATCGCCGG
GGAAATTCCATCCGGGGGTCGGAGGAGGAGCAAGGGAAGGAGATCTTGCA
TTTGGATCGCCGTCCGCATCGCACCAGCAGCATCATACTCTCTTCGATGA
ACAGCCAATGACAAGGAGGTTTTCCTTGATTTTACCTAAGGAAGAGGCCG
ACGAGCAGGCTGCCAGGGATATGGAGTTGTCGTCGTCGTTGACGCATGCG
GGGGGAGGAGGGCACCATATGCTGAGTCACCAGCCACCGTATCACCGGCA
TAGGAGTGGAAGTGGAAGCGGGAGCGATCGAAGTTCAGGCGGAGGGGCGG
GGGAGGGGGCATTTGCGATGCAGATATAG back to topCoding sequence (CDS) from alignment at scaffold_7:293983..296211+ >mRNA_2934 ID=mRNA_2934|Name=jgi.p|Nanoce1779_2|638110|organism=Nannochloropsis oceanica|type=CDS|length=5712bp|location=Sequence derived from alignment at scaffold_7:293983..296211+ (Nannochloropsis oceanica) ATGGTGGCGTGGAAGCGGCGGCTGCATGGTGCCGTCTGCGAGTTCTTCGA GGTAGACAAGCGGCATACCACCGTGGCCACCGAGGTCCGGGCGGGTATCA CCACATTTTTGACTATGAGCTACATTCTGCTTGTCAACCCTCAAATCTTG GCGCAGATAGGCTTCCCAAAATCCGACGTTGTGGTCGCCACCGCCGTGGG CGCCGGGCTCGCCAGCATGGTCTGTGGGATCTTTGGCAACTTGCCTTTTG GTCTTGCGCCTGGCACGGGCTTGAGCGCGTACCTATCTTATGGCCTCGTC CTCGCTGGGGTGCTCACTCGCCCGCAAGCGATGACGGTATGTTTTTTGTC GGGGTTTGCACTGGGCGTATCAGCCTTGGCGCAGGTTAGCACGGTCATTA TGAGGGTTATACCAAGAGCAGTAAAACTCGCGACAGTCGTGGGGATGGGC CTATTGATTGCATTAATTGGCATGGTGTCTATAAGGCTGGTGGTCCCGAA TGAAGATACGTTGGTGACGCTTGGGGATTTTTCGGACTACCATATATGGT TGGCGCTTGTGGGGTTGGTGGTGACAGGTTCAATGCTCTTCCACCAAGTA AAGGGTGGGGTGCTCGCGGGTATCGTCCTCATTACCGTTTTTGTCTGGTG TATGGATCATGACGGCCCCTCAGAGATCTTTTCCATCCCCCATCTGGAAT ACGGCGTCACGAGAAACATCGACTTGACGCCCGCTTCCTTATCCTGGGAA ATGCTCCCTCCATTGCTCGCGTTTTTATTTGTCGGTTTATTTGACATCTC GGGAGTGATGTTCGGGCTGTCGTCTCTCGCAAAGATAATGGAGGAGGATG GACATATACCGGGTAGTATTTGGGCGTTCTTAGGGTCGGGTTTAGGCACC TTGGTGGCAGCTATGGCCGGGAGTTCGCCCATCATCATCCACGTGGAAAG CGCGGCGGGGATCAGGGAAGGAGGAAGGACGGGATTGACGGCTGTTGTTG TAGGATTATTGTTTTTTTTGAGTTTATTTTTCGCGCCTTTATTTGGACAC GTCCCGACGGCGGCGACAGCACCAATTTTGATTCTGGTGGGGGCGATGAT GATAGGAGAGAGTCAGCACATCGACTGGGCGGACATGAGTCAGGCGATCC CGGCGTTTTTGACGAGCATGATGATGCCCTTCACGTTCTCGATCCCGAAT GGAATTTTGTTCGGGGTGGGGATGAGCGTGACGTTTTTTGAAGAGGCCGA CGAGCAGGCTGCCAGGGATATGGAGTTGTCGTCGTCGTTGACGCATGCGG GGGGAGGAGGGCACCATATGCTGAGTCACCAGCCACCGTATCACCGGCAT AGGAGTGGAAGTGGAAGCGGGAGCGATCGAAGTTCAGGCGGAGGGGCGGG GGAGGGGGCATTTGCGATGCAGATATAGATGGTGGCGTGGAAGCGGCGGC TGCATGGTGCCGTCTGCGAGTTCTTCGAGGTAGACAAGCGGCATACCACC GTGGCCACCGAGGTCCGGGCGGGTATCACCACATTTTTGACTATGAGCTA CATTCTGCTTGTCAACCCTCAAATCTTGGCGCAGATAGGCTTCCCAAAAT CCGACGTTGTGGTCGCCACCGCCGTGGGCGCCGGGCTCGCCAGCATGGTC TGTGGGATCTTTGGCAACTTGCCTTTTGGTCTTGCGCCTGGCACGGGCTT GAGCGCGTACCTATCTTATGGCCTCGTCCTCGCTGGGGTGCTCACTCGCC CGCAAGCGATGACGGTATGTTTTTTGTCGGGGTTTGCACTGGGCGTATCA GCCTTGGCGCAGGTTAGCACGGTCATTATGAGGGTTATACCAAGAGCAGT AAAACTCGCGACAGTCGTGGGGATGGGCCTATTGATTGCATTAATTGGCA TGGTGTCTATAAGGCTGGTGGTCCCGAATGAAGATACGTTGGTGACGCTT GGGGATTTTTCGGACTACCATATATGGTTGGCGCTTGTGGGGTTGGTGGT GACAGGTTCAATGCTCTTCCACCAAGTAAAGGGTGGGGTGCTCGCGGGTA TCGTCCTCATTACCGTTTTTGTCTGGTGTATGGATCATGACGGCCCCTCA GAGATCTTTTCCATCCCCCATCTGGAATACGGCGTCACGAGAAACATCGA CTTGACGCCCGCTTCCTTATCCTGGGAAATGCTCCCTCCATTGCTCGCGT TTTTATTTGTCGGTTTATTTGACATCTCGGGAGTGATGTTCGGGCTGTCG TCTCTCGCAAAGATAATGGAGGAGGATGGACATATACCGGGTAGTATTTG GGCGTTCTTAGGGTCGGGTTTAGGCACCTTGGTGGCAGCTATGGCCGGGA GTTCGCCCATCATCATCCACGTGGAAAGCGCGGCGGGGATCAGGGAAGGA GGAAGGACGGGATTGACGGCTGTTGTTGTAGGATTATTGTTTTTTTTGAG TTTATTTTTCGCGCCTTTATTTGGACACGTCCCGACGGCGGCGACAGCAC CAATTTTGATTCTGGTGGGGGCGATGATGATAGGAGAGAGTCAGCACATC GACTGGGCGGACATGAGTCAGGCGATCCCGGCGTTTTTGACGAGCATGAT GATGCCCTTCACGTTCTCGATCCCGAATGGAATTTTGTTCGGGGTGGGGA TGAGCGTGACGTTTTTTGAAGAGGCCGACGAGCAGGCTGCCAGGGATATG GAGTTGTCGTCGTCGTTGACGCATGCGGGGGGAGGAGGGCACCATATGCT GAGTCACCAGCCACCGTATCACCGGCATAGGAGTGGAAGTGGAAGCGGGA GCGATCGAAGTTCAGGCGGAGGGGCGGGGGAGGGGGCATTTGCGATGCAG ATATAGATGGTGGCGTGGAAGCGGCGGCTGCATGGTGCCGTCTGCGAGTT CTTCGAGGTAGACAAGCGGCATACCACCGTGGCCACCGAGGTCCGGGCGG GTATCACCACATTTTTGACTATGAGCTACATTCTGCTTGTCAACCCTCAA ATCTTGGCGCAGATAGGCTTCCCAAAATCCGACGTTGTGGTCGCCACCGC CGTGGGCGCCGGGCTCGCCAGCATGGTCTGTGGGATCTTTGGCAACTTGC CTTTTGGTCTTGCGCCTGGCACGGGCTTGAGCGCGTACCTATCTTATGGC CTCGTCCTCGCTGGGGTGCTCACTCGCCCGCAAGCGATGACGGTATGTTT TTTGTCGGGGTTTGCACTGGGCGTATCAGCCTTGGCGCAGGTTAGCACGG TCATTATGAGGGTTATACCAAGAGCAGTAAAACTCGCGACAGTCGTGGGG ATGGGCCTATTGATTGCATTAATTGGCATGGTGTCTATAAGGCTGGTGGT CCCGAATGAAGATACGTTGGTGACGCTTGGGGATTTTTCGGACTACCATA TATGGTTGGCGCTTGTGGGGTTGGTGGTGACAGGTTCAATGCTCTTCCAC CAAGTAAAGGGTGGGGTGCTCGCGGGTATCGTCCTCATTACCGTTTTTGT CTGGTGTATGGATCATGACGGCCCCTCAGAGATCTTTTCCATCCCCCATC TGGAATACGGCGTCACGAGAAACATCGACTTGACGCCCGCTTCCTTATCC TGGGAAATGCTCCCTCCATTGCTCGCGTTTTTATTTGTCGGTTTATTTGA CATCTCGGGAGTGATGTTCGGGCTGTCGTCTCTCGCAAAGATAATGGAGG AGGATGGACATATACCGGGTAGTATTTGGGCGTTCTTAGGGTCGGGTTTA GGCACCTTGGTGGCAGCTATGGCCGGGAGTTCGCCCATCATCATCCACGT GGAAAGCGCGGCGGGGATCAGGGAAGGAGGAAGGACGGGATTGACGGCTG TTGTTGTAGGATTATTGTTTTTTTTGAGTTTATTTTTCGCGCCTTTATTT GGACACGTCCCGACGGCGGCGACAGCACCAATTTTGATTCTGGTGGGGGC GATGATGATAGGAGAGAGTCAGCACATCGACTGGGCGGACATGAGTCAGG CGATCCCGGCGTTTTTGACGAGCATGATGATGCCCTTCACGTTCTCGATC CCGAATGGAATTTTGTTCGGGGTGGGGATGAGCGTGACGTTTTTTGAAGA GGCCGACGAGCAGGCTGCCAGGGATATGGAGTTGTCGTCGTCGTTGACGC ATGCGGGGGGAGGAGGGCACCATATGCTGAGTCACCAGCCACCGTATCAC CGGCATAGGAGTGGAAGTGGAAGCGGGAGCGATCGAAGTTCAGGCGGAGG GGCGGGGGAGGGGGCATTTGCGATGCAGATATAGATGGTGGCGTGGAAGC GGCGGCTGCATGGTGCCGTCTGCGAGTTCTTCGAGGTAGACAAGCGGCAT ACCACCGTGGCCACCGAGGTCCGGGCGGGTATCACCACATTTTTGACTAT GAGCTACATTCTGCTTGTCAACCCTCAAATCTTGGCGCAGATAGGCTTCC CAAAATCCGACGTTGTGGTCGCCACCGCCGTGGGCGCCGGGCTCGCCAGC ATGGTCTGTGGGATCTTTGGCAACTTGCCTTTTGGTCTTGCGCCTGGCAC GGGCTTGAGCGCGTACCTATCTTATGGCCTCGTCCTCGCTGGGGTGCTCA CTCGCCCGCAAGCGATGACGGTATGTTTTTTGTCGGGGTTTGCACTGGGC GTATCAGCCTTGGCGCAGGTTAGCACGGTCATTATGAGGGTTATACCAAG AGCAGTAAAACTCGCGACAGTCGTGGGGATGGGCCTATTGATTGCATTAA TTGGCATGGTGTCTATAAGGCTGGTGGTCCCGAATGAAGATACGTTGGTG ACGCTTGGGGATTTTTCGGACTACCATATATGGTTGGCGCTTGTGGGGTT GGTGGTGACAGGTTCAATGCTCTTCCACCAAGTAAAGGGTGGGGTGCTCG CGGGTATCGTCCTCATTACCGTTTTTGTCTGGTGTATGGATCATGACGGC CCCTCAGAGATCTTTTCCATCCCCCATCTGGAATACGGCGTCACGAGAAA CATCGACTTGACGCCCGCTTCCTTATCCTGGGAAATGCTCCCTCCATTGC TCGCGTTTTTATTTGTCGGTTTATTTGACATCTCGGGAGTGATGTTCGGG CTGTCGTCTCTCGCAAAGATAATGGAGGAGGATGGACATATACCGGGTAG TATTTGGGCGTTCTTAGGGTCGGGTTTAGGCACCTTGGTGGCAGCTATGG CCGGGAGTTCGCCCATCATCATCCACGTGGAAAGCGCGGCGGGGATCAGG GAAGGAGGAAGGACGGGATTGACGGCTGTTGTTGTAGGATTATTGTTTTT TTTGAGTTTATTTTTCGCGCCTTTATTTGGACACGTCCCGACGGCGGCGA CAGCACCAATTTTGATTCTGGTGGGGGCGATGATGATAGGAGAGAGTCAG CACATCGACTGGGCGGACATGAGTCAGGCGATCCCGGCGTTTTTGACGAG CATGATGATGCCCTTCACGTTCTCGATCCCGAATGGAATTTTGTTCGGGG TGGGGATGAGCGTGACGTTTTTTGAAGAGGCCGACGAGCAGGCTGCCAGG GATATGGAGTTGTCGTCGTCGTTGACGCATGCGGGGGGAGGAGGGCACCA TATGCTGAGTCACCAGCCACCGTATCACCGGCATAGGAGTGGAAGTGGAA GCGGGAGCGATCGAAGTTCAGGCGGAGGGGCGGGGGAGGGGGCATTTGCG ATGCAGATATAG back to top
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