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Properties
| Property Name | Value |
|---|
| TranscriptId | 576913 |
| Track | FilteredModels2 |
| ProteinId | 576827 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:713522..715968 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_289 ID=mRNA_289|Name=jgi.p|Nanoce1779_2|576827|organism=Nannochloropsis oceanica|type=mRNA|length=1132bp
AGACTGCTGCGTCGTACTTTGGATAATCGAAATGGCTGCGCAGGACCCAT
TTTTCGCAGCCCGAGAGGAGTTGCGAGGCAAGGCAGACTACATCCACGCC
CGGCATGAAAAGCTATTACGGCTCTTGAAGGCCACAAATACTGCCAGCGA
CCCAGGATTTAAGGAGCTGTACGCCTGCTTGTACCGGGACGTGGAGGCGG
CAGATAGGCAGTGCAACGAGTTGGAGAAGGTCGTGGCCTTGGTAGAGAAC
CACCGCCAGCGCTTCCGACATATTGACAATAACGAGTTAGCGGAGCGCCG
GGCTTTCGTGACACGGACGAAGCAGTCACTGGTGAAAGTCTGGAACAACT
TGAAGAGCGACCACGTCAAGGGCAAGATGAGCAACGACGAGAGGGACTTC
CAACGCAGCCGCCCATACGATGGCAGCGCGATGGGCCACCCAACGGCGGC
CGGCAGGGGAGGAGTTGGAGGAGGGGCTAACGGGGCGTTTATTGACGAGC
AGCGCTCTAGGCAACATCTGATGCTGCAGGAGCAAGACCAAGGGTTGGAA
GAGCTAGGCACGGCAGTGGACCGAGTGGGGCGGATGGCTGATGCCATGAA
TCAGGAGTTGAATGCGCAGAATCGGATGTTAGGGGATTTAGAGGTGGAGG
TGGAGAATACGAACGAGCAGATGAATTTTGTCATGGGCAGGCTGAGTAAG
CTGTTGAAGACGAAAGACAAGTACCAGCTGTGGCTCATCATCTTTTTGAC
GGTGGTACTGATTGTCCTCATCATCCTCACGATATACGTTTAAAGCAAAA
TTGGAGCAGCCACCACATAGGCTACTCAATTGTGTCGTCATCTGCATCTA
TTCCGTGGGCTCTCAGTGTGTGGGTGGGTTGCCACCTTCTGGGAGGCGGG
ACGGAGGGCGCATGGAGGGGCGGGTCTTTAAACGATCGAATGCGTGTATG
TGTGCAGGTGTCTTTATATGTACAGACGGGGACCAAAGAAGAAAAAAGAG
ATATTCTCGCACACTAAAACAAAGCAAAGCTGATATATTAGAGTAAGTGA
TAGAAGGAGAAGACGAAGAAGAAGAAGAAGAGGAAGGTGAAGGAAGATGA
AGGAAAAGAAGCAACACCAATTAATGTTCTAA back to topprotein sequence of jgi.p|Nanoce1779_2|576827 >mRNA_289-protein ID=mRNA_289-protein|Name=jgi.p|Nanoce1779_2|576827|organism=Nannochloropsis oceanica|type=polypeptide|length=254bp
MAAQDPFFAAREELRGKADYIHARHEKLLRLLKATNTASDPGFKELYACL
YRDVEAADRQCNELEKVVALVENHRQRFRHIDNNELAERRAFVTRTKQSL
VKVWNNLKSDHVKGKMSNDERDFQRSRPYDGSAMGHPTAAGRGGVGGGAN
GAFIDEQRSRQHLMLQEQDQGLEELGTAVDRVGRMADAMNQELNAQNRML
GDLEVEVENTNEQMNFVMGRLSKLLKTKDKYQLWLIIFLTVVLIVLIILT
IYV* back to topmRNA from alignment at scaffold_3:713522..715968- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_289 ID=mRNA_289|Name=jgi.p|Nanoce1779_2|576827|organism=Nannochloropsis oceanica|type=mRNA|length=2447bp|location=Sequence derived from alignment at scaffold_3:713522..715968- (Nannochloropsis oceanica)
AGACTGCTGCGTCGTACTTTGGATAATCGAAATGGCTGCGCAGGACCCAT
TTTTCGCAGCCCGAGAGTAAGTGACTGGCATGAGGGTTGGTTGAGAGGTT
GTCTTCGTCCGGTTTGCATGAAACATCATATGCAGGCAATAACTGGCACA
AGCAATAGTGTGCGGGAGGCTGGCTGGGATTTCGGCGCTCCTGTAGTCGC
CCTGCTTTTTGACGTATCAGAACACGGGGGAGGGAGGGAGGGAGGCCCAT
TTACTCGGCACCCTTGTCGTGGCACCGTCGACGTATAAGACCAGAGGAAA
GAATGAGGGTGGCTGGTGATATTATTTTCGTTCCGCTCTTAAGCGGTCGG
AGGAAGTGTGTCGCGGAGGAAGCAGAGAGAGGGGCGTCCTTGCTCATTCC
CGTCTGATTTACTTACTCGACGTCACTCACACATCAACAGGGAGTTGCGA
GGCAAGGCAGACTACATCCACGCCCGGCATGAAAAGCTATTACGGCTCTT
GAAGGCCACAAATACTGCCAGCGACCCAGGATTTAAGGAGCTGTACGCCT
GTACGTAGGGCGAGCTAGCTACCGGAGAGAGGGCTCGGGCGGTGGGAGGG
TAGCCTGGACCTATCCACTCCTTCTCTCGTGCACAAACTAAGCTATGAAT
GCAGGGATTGAAAGAAAAACGGTATTTTTCAGTTGTTGCTATTGGTTTTC
CTACAAGCACGAACTCAACACGGTCATGCATCCTCTCATTCTTGTAGGCT
TGTACCGGGACGTGGAGGCGGCAGATAGGCAGTGCAACGAGTTGGAGAAG
GTCGTGGCCTTGGTAGAGAACCACCGCCAGCGCTTCCGACATATTGACAA
TGTGAGTGAGTGAGGATAAAGGGCAAGATATAGCTTGGATACAGGGAAGC
GAGCAAGAGGTGCCAAGGGCGAGATCTTCACGAATGAAGAAACATGGCTA
GCTTTTCCTCATGTCCTCCTTCCACACGGACACACATACACCTACAGAAC
GAGTTAGCGGAGCGCCGGGCTTTCGTGACACGGACGAAGCAGTCACTGGT
GAAAGTCTGGAACAACTTGAAGAGCGACCACGTCAAGGGCAAGATGAGCA
ACGACGAGAGGGACGTAAGTGTCTTGTGAGAGTCGGTGGGGCTGGAGGGA
AAGGAGAAATATTGGGAAACCGAATTTGATCCATCAACGATACCGAGCTG
TGTGTGAAGAAAGACCAACGCTCCTCATATATTTAATTCTCGCTCCCAAA
TCTCTCCTTTCCTCTTTTATATCTTCTGCATACAGTTCCAACGCAGCCGC
CCATACGATGGCAGCGCGATGGGCCACCCAACGGCGGCCGGCAGGGGAGG
AGTTGGAGGAGGGGCTAACGGGGCGTTTATTGACGAGCAGCGCTCTAGGC
AACATGTAAGAGCTCGGAGGGGTAGGAGGGGATTGGGGCAGGAGAGAGGG
ATGGGGAGAGTGGTGCCAGGGGGATGAAGTCGCTGAGCCAATGGCGAGTT
CAACGACAAACATCGTGCCAGACAACGTGTGAAGGAAAGATGGGGGGGTC
CCTCAAGGAGGGGGAGAAGATGGAAGGAGGGGGGAACCTAAGGAGGGGGA
GAAGAGGGGAAGAGACGATAAAAGACGGGAAGGCCCTGCTCGCCTGGAGG
AGCATGCGTCTTATTCTCTTTCCCTTTCACACGTCCCAGCTGATGCTGCA
GGAGCAAGACCAAGGGTTGGAAGAGCTAGGCACGGCAGTGGACCGAGTGG
GGCGGATGGCTGATGCCATGAATCAGGAGTTGAATGCGCAGAATCGGATG
TTAGGGGATTTAGAGGTGGAGGTGGAGAATACGAACGAGCAGATGAATTT
TGTCATGGGCAGGCTGAGTAAGCTGTTGAAGACGAAAGGTAAGTTCGAAC
TTGGCAAGACTGGGGGTGGGGTCGGGGGGGAGGTTTTGGGGATGAGTTTT
AAGATGACACATTTTATCGATTCTAATTGCATTTTTATTTTTATTTTAAA
TTTCCTCGCATGCACACACGCACACACACAGACAAGTACCAGCTGTGGCT
CATCATCTTTTTGACGGTGGTACTGATTGTCCTCATCATCCTCACGATAT
ACGTTTAAAGCAAAATTGGAGCAGCCACCACATAGGCTACTCAATTGTGT
CGTCATCTGCATCTATTCCGTGGGCTCTCAGTGTGTGGGTGGGTTGCCAC
CTTCTGGGAGGCGGGACGGAGGGCGCATGGAGGGGCGGGTCTTTAAACGA
TCGAATGCGTGTATGTGTGCAGGTGTCTTTATATGTACAGACGGGGACCA
AAGAAGAAAAAAGAGATATTCTCGCACACTAAAACAAAGCAAAGCTGATA
TATTAGAGTAAGTGATAGAAGGAGAAGACGAAGAAGAAGAAGAAGAGGAA
GGTGAAGGAAGATGAAGGAAAAGAAGCAACACCAATTAATGTTCTAA back to topCoding sequence (CDS) from alignment at scaffold_3:713522..715968- >mRNA_289 ID=mRNA_289|Name=jgi.p|Nanoce1779_2|576827|organism=Nannochloropsis oceanica|type=CDS|length=5334bp|location=Sequence derived from alignment at scaffold_3:713522..715968- (Nannochloropsis oceanica)
ACAAGTACCAGCTGTGGCTCATCATCTTTTTGACGGTGGTACTGATTGTC
CTCATCATCCTCACGATATACGTTTAACTGATGCTGCAGGAGCAAGACCA
AGGGTTGGAAGAGCTAGGCACGGCAGTGGACCGAGTGGGGCGGATGGCTG
ATGCCATGAATCAGGAGTTGAATGCGCAGAATCGGATGTTAGGGGATTTA
GAGGTGGAGGTGGAGAATACGAACGAGCAGATGAATTTTGTCATGGGCAG
GCTGAGTAAGCTGTTGAAGACGAAAGTTCCAACGCAGCCGCCCATACGAT
GGCAGCGCGATGGGCCACCCAACGGCGGCCGGCAGGGGAGGAGTTGGAGG
AGGGGCTAACGGGGCGTTTATTGACGAGCAGCGCTCTAGGCAACATAACG
AGTTAGCGGAGCGCCGGGCTTTCGTGACACGGACGAAGCAGTCACTGGTG
AAAGTCTGGAACAACTTGAAGAGCGACCACGTCAAGGGCAAGATGAGCAA
CGACGAGAGGGACGCTTGTACCGGGACGTGGAGGCGGCAGATAGGCAGTG
CAACGAGTTGGAGAAGGTCGTGGCCTTGGTAGAGAACCACCGCCAGCGCT
TCCGACATATTGACAATGGAGTTGCGAGGCAAGGCAGACTACATCCACGC
CCGGCATGAAAAGCTATTACGGCTCTTGAAGGCCACAAATACTGCCAGCG
ACCCAGGATTTAAGGAGCTGTACGCCTATGGCTGCGCAGGACCCATTTTT
CGCAGCCCGAGAACAAGTACCAGCTGTGGCTCATCATCTTTTTGACGGTG
GTACTGATTGTCCTCATCATCCTCACGATATACGTTTAACTGATGCTGCA
GGAGCAAGACCAAGGGTTGGAAGAGCTAGGCACGGCAGTGGACCGAGTGG
GGCGGATGGCTGATGCCATGAATCAGGAGTTGAATGCGCAGAATCGGATG
TTAGGGGATTTAGAGGTGGAGGTGGAGAATACGAACGAGCAGATGAATTT
TGTCATGGGCAGGCTGAGTAAGCTGTTGAAGACGAAAGTTCCAACGCAGC
CGCCCATACGATGGCAGCGCGATGGGCCACCCAACGGCGGCCGGCAGGGG
AGGAGTTGGAGGAGGGGCTAACGGGGCGTTTATTGACGAGCAGCGCTCTA
GGCAACATAACGAGTTAGCGGAGCGCCGGGCTTTCGTGACACGGACGAAG
CAGTCACTGGTGAAAGTCTGGAACAACTTGAAGAGCGACCACGTCAAGGG
CAAGATGAGCAACGACGAGAGGGACGCTTGTACCGGGACGTGGAGGCGGC
AGATAGGCAGTGCAACGAGTTGGAGAAGGTCGTGGCCTTGGTAGAGAACC
ACCGCCAGCGCTTCCGACATATTGACAATGGAGTTGCGAGGCAAGGCAGA
CTACATCCACGCCCGGCATGAAAAGCTATTACGGCTCTTGAAGGCCACAA
ATACTGCCAGCGACCCAGGATTTAAGGAGCTGTACGCCTATGGCTGCGCA
GGACCCATTTTTCGCAGCCCGAGAACAAGTACCAGCTGTGGCTCATCATC
TTTTTGACGGTGGTACTGATTGTCCTCATCATCCTCACGATATACGTTTA
ACTGATGCTGCAGGAGCAAGACCAAGGGTTGGAAGAGCTAGGCACGGCAG
TGGACCGAGTGGGGCGGATGGCTGATGCCATGAATCAGGAGTTGAATGCG
CAGAATCGGATGTTAGGGGATTTAGAGGTGGAGGTGGAGAATACGAACGA
GCAGATGAATTTTGTCATGGGCAGGCTGAGTAAGCTGTTGAAGACGAAAG
TTCCAACGCAGCCGCCCATACGATGGCAGCGCGATGGGCCACCCAACGGC
GGCCGGCAGGGGAGGAGTTGGAGGAGGGGCTAACGGGGCGTTTATTGACG
AGCAGCGCTCTAGGCAACATAACGAGTTAGCGGAGCGCCGGGCTTTCGTG
ACACGGACGAAGCAGTCACTGGTGAAAGTCTGGAACAACTTGAAGAGCGA
CCACGTCAAGGGCAAGATGAGCAACGACGAGAGGGACGCTTGTACCGGGA
CGTGGAGGCGGCAGATAGGCAGTGCAACGAGTTGGAGAAGGTCGTGGCCT
TGGTAGAGAACCACCGCCAGCGCTTCCGACATATTGACAATGGAGTTGCG
AGGCAAGGCAGACTACATCCACGCCCGGCATGAAAAGCTATTACGGCTCT
TGAAGGCCACAAATACTGCCAGCGACCCAGGATTTAAGGAGCTGTACGCC
TATGGCTGCGCAGGACCCATTTTTCGCAGCCCGAGAACAAGTACCAGCTG
TGGCTCATCATCTTTTTGACGGTGGTACTGATTGTCCTCATCATCCTCAC
GATATACGTTTAACTGATGCTGCAGGAGCAAGACCAAGGGTTGGAAGAGC
TAGGCACGGCAGTGGACCGAGTGGGGCGGATGGCTGATGCCATGAATCAG
GAGTTGAATGCGCAGAATCGGATGTTAGGGGATTTAGAGGTGGAGGTGGA
GAATACGAACGAGCAGATGAATTTTGTCATGGGCAGGCTGAGTAAGCTGT
TGAAGACGAAAGTTCCAACGCAGCCGCCCATACGATGGCAGCGCGATGGG
CCACCCAACGGCGGCCGGCAGGGGAGGAGTTGGAGGAGGGGCTAACGGGG
CGTTTATTGACGAGCAGCGCTCTAGGCAACATAACGAGTTAGCGGAGCGC
CGGGCTTTCGTGACACGGACGAAGCAGTCACTGGTGAAAGTCTGGAACAA
CTTGAAGAGCGACCACGTCAAGGGCAAGATGAGCAACGACGAGAGGGACG
CTTGTACCGGGACGTGGAGGCGGCAGATAGGCAGTGCAACGAGTTGGAGA
AGGTCGTGGCCTTGGTAGAGAACCACCGCCAGCGCTTCCGACATATTGAC
AATGGAGTTGCGAGGCAAGGCAGACTACATCCACGCCCGGCATGAAAAGC
TATTACGGCTCTTGAAGGCCACAAATACTGCCAGCGACCCAGGATTTAAG
GAGCTGTACGCCTATGGCTGCGCAGGACCCATTTTTCGCAGCCCGAGAAC
AAGTACCAGCTGTGGCTCATCATCTTTTTGACGGTGGTACTGATTGTCCT
CATCATCCTCACGATATACGTTTAACTGATGCTGCAGGAGCAAGACCAAG
GGTTGGAAGAGCTAGGCACGGCAGTGGACCGAGTGGGGCGGATGGCTGAT
GCCATGAATCAGGAGTTGAATGCGCAGAATCGGATGTTAGGGGATTTAGA
GGTGGAGGTGGAGAATACGAACGAGCAGATGAATTTTGTCATGGGCAGGC
TGAGTAAGCTGTTGAAGACGAAAGTTCCAACGCAGCCGCCCATACGATGG
CAGCGCGATGGGCCACCCAACGGCGGCCGGCAGGGGAGGAGTTGGAGGAG
GGGCTAACGGGGCGTTTATTGACGAGCAGCGCTCTAGGCAACATAACGAG
TTAGCGGAGCGCCGGGCTTTCGTGACACGGACGAAGCAGTCACTGGTGAA
AGTCTGGAACAACTTGAAGAGCGACCACGTCAAGGGCAAGATGAGCAACG
ACGAGAGGGACGCTTGTACCGGGACGTGGAGGCGGCAGATAGGCAGTGCA
ACGAGTTGGAGAAGGTCGTGGCCTTGGTAGAGAACCACCGCCAGCGCTTC
CGACATATTGACAATGGAGTTGCGAGGCAAGGCAGACTACATCCACGCCC
GGCATGAAAAGCTATTACGGCTCTTGAAGGCCACAAATACTGCCAGCGAC
CCAGGATTTAAGGAGCTGTACGCCTATGGCTGCGCAGGACCCATTTTTCG
CAGCCCGAGAACAAGTACCAGCTGTGGCTCATCATCTTTTTGACGGTGGT
ACTGATTGTCCTCATCATCCTCACGATATACGTTTAACTGATGCTGCAGG
AGCAAGACCAAGGGTTGGAAGAGCTAGGCACGGCAGTGGACCGAGTGGGG
CGGATGGCTGATGCCATGAATCAGGAGTTGAATGCGCAGAATCGGATGTT
AGGGGATTTAGAGGTGGAGGTGGAGAATACGAACGAGCAGATGAATTTTG
TCATGGGCAGGCTGAGTAAGCTGTTGAAGACGAAAGTTCCAACGCAGCCG
CCCATACGATGGCAGCGCGATGGGCCACCCAACGGCGGCCGGCAGGGGAG
GAGTTGGAGGAGGGGCTAACGGGGCGTTTATTGACGAGCAGCGCTCTAGG
CAACATAACGAGTTAGCGGAGCGCCGGGCTTTCGTGACACGGACGAAGCA
GTCACTGGTGAAAGTCTGGAACAACTTGAAGAGCGACCACGTCAAGGGCA
AGATGAGCAACGACGAGAGGGACGCTTGTACCGGGACGTGGAGGCGGCAG
ATAGGCAGTGCAACGAGTTGGAGAAGGTCGTGGCCTTGGTAGAGAACCAC
CGCCAGCGCTTCCGACATATTGACAATGGAGTTGCGAGGCAAGGCAGACT
ACATCCACGCCCGGCATGAAAAGCTATTACGGCTCTTGAAGGCCACAAAT
ACTGCCAGCGACCCAGGATTTAAGGAGCTGTACGCCTATGGCTGCGCAGG
ACCCATTTTTCGCAGCCCGAGAACAAGTACCAGCTGTGGCTCATCATCTT
TTTGACGGTGGTACTGATTGTCCTCATCATCCTCACGATATACGTTTAAC
TGATGCTGCAGGAGCAAGACCAAGGGTTGGAAGAGCTAGGCACGGCAGTG
GACCGAGTGGGGCGGATGGCTGATGCCATGAATCAGGAGTTGAATGCGCA
GAATCGGATGTTAGGGGATTTAGAGGTGGAGGTGGAGAATACGAACGAGC
AGATGAATTTTGTCATGGGCAGGCTGAGTAAGCTGTTGAAGACGAAAGTT
CCAACGCAGCCGCCCATACGATGGCAGCGCGATGGGCCACCCAACGGCGG
CCGGCAGGGGAGGAGTTGGAGGAGGGGCTAACGGGGCGTTTATTGACGAG
CAGCGCTCTAGGCAACATAACGAGTTAGCGGAGCGCCGGGCTTTCGTGAC
ACGGACGAAGCAGTCACTGGTGAAAGTCTGGAACAACTTGAAGAGCGACC
ACGTCAAGGGCAAGATGAGCAACGACGAGAGGGACGCTTGTACCGGGACG
TGGAGGCGGCAGATAGGCAGTGCAACGAGTTGGAGAAGGTCGTGGCCTTG
GTAGAGAACCACCGCCAGCGCTTCCGACATATTGACAATGGAGTTGCGAG
GCAAGGCAGACTACATCCACGCCCGGCATGAAAAGCTATTACGGCTCTTG
AAGGCCACAAATACTGCCAGCGACCCAGGATTTAAGGAGCTGTACGCCTA
TGGCTGCGCAGGACCCATTTTTCGCAGCCCGAGA back to top
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