Properties
| Property Name | Value |
|---|
| TranscriptId | 583640 |
| Track | FilteredModels2 |
| ProteinId | 583554 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:78253..79660 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2852 ID=mRNA_2852|Name=jgi.p|Nanoce1779_2|583554|organism=Nannochloropsis oceanica|type=mRNA|length=1408bp
CAGCCACAGGCTGCCCGAAAACAAGCTTGTCGTCGCGTCGTCATATTGTC
GTCCCTATTGTGCCTTTGTGTGCAGGCCAAAGCCAGAAACCCCCCTCACG
CAGCATATTCATCATGGCCGCCTCGTCCCGCGCAACGCTGCAGTTCGTAG
GGCTGTTTGCCCTGGTTTTGGCAAGCACCACTTCGGCTATCTCAGTCCTC
TCCCGGACTCAAGCACCAGCATGCACGCAGAGACCAAGCCCACCGATGAT
GGCAATAGTCAACCCTTTCCATACCGAACGTCGAGGCGGAGCGGATGTTA
GAGGTCGGAAACGCGTGCCTCCCGCCCTTGCAGCCCCCCACACCTACACG
GGCAACAGGCGCATGTTGCCCGCGACGATCTCCAACCCGCTGACACTCCT
CAAGACCTTGGGCCGGGTGTACAGCAACTGGATGATGGAGCAACCCATCC
GCGCGAACCTGATCTCAGGCGTCTTGATGGTGGCTCTCGGAGATGGGATC
AGTCAAGCTATCGAAGTTGACCCCGAAACAGGCCTAAAAAAATGTAAATC
CTGGCGGGATCTTTCCCCCCGTCGCCTCGCCAATGCTGGGTTTGCGGGCG
CGGTTTTTAATGGTGTGTTGCTGCCGCAATGGTATTTGTTGATGCATAAG
GTGTCGCCTGGGGCAGAGACTGCGAAAACGATCGCAGCGAAGATTCTCGG
GAATTGCGTGGCGTGGGGATGTGTGGGCAATGCGGCTATCATGGCGATGA
GGCGGATGTTGGACGGGGAGAGCTGGGAGCAGACGGAGCGGGCGGTGAGG
AGGGACTTATGGGGGGTGATGAAGAATGATTATAAAATATGGCCTTTATA
TGACGTGTTGTGTTTTACATGTATCCCGAGACATATGCATGGTCTAAGCA
CGGGAACGTTGGGCATCGTATGGGCGGCTTATTTGTCGTACGTCACGCAC
ACCGAGGATCATTAGAGAGGGAGAAAGACGAGGAGGGCGCGGGAGAGAGG
GAGAAAGGGAAATGTTTTCTCTTTTTCTCTCCTTTTTTCATTCTTCTTTA
TCTTGAAGCGAGGGAGCAGAGTACCGGAAAAGAATGGAAGGGTTTGTGAT
TTGTTCTTGTGTGCATGTACGATGATAGGGAGTGTGTGTGTAAACTGAAC
GTTGACAAGGCCTTTGGAACGACTCCAGTGGCTGCCGCAGCCATTGCAGC
TGCGACAGACTCAAAGGCAGCAATTAACAACAGCTTGATTAAAATTAACA
ATGAGCGATGAGCAGGAAAGACGAAAATAGAAAAAAAGGGTTTCGAAATT
AAAGGAAATGGGCTGGCCTCGAAAGACAAGAAAATGAGGCAGCTCAAAAG
TTGCAGAATGCAATGTGCCTCGCTTCGCAAGGAACGGGGGGAACATAAGG
TGTTGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|583554 >mRNA_2852-protein ID=mRNA_2852-protein|Name=jgi.p|Nanoce1779_2|583554|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MAASSRATLQFVGLFALVLASTTSAISVLSRTQAPACTQRPSPPMMAIVN
PFHTERRGGADVRGRKRVPPALAAPHTYTGNRRMLPATISNPLTLLKTLG
RVYSNWMMEQPIRANLISGVLMVALGDGISQAIEVDPETGLKKCKSWRDL
SPRRLANAGFAGAVFNGVLLPQWYLLMHKVSPGAETAKTIAAKILGNCVA
WGCVGNAAIMAMRRMLDGESWEQTERAVRRDLWGVMKNDYKIWPLYDVLC
FTCIPRHMHGLSTGTLGIVWAAYLSYVTHTEDH* back to topmRNA from alignment at scaffold_7:78253..79660- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2852 ID=mRNA_2852|Name=jgi.p|Nanoce1779_2|583554|organism=Nannochloropsis oceanica|type=mRNA|length=1408bp|location=Sequence derived from alignment at scaffold_7:78253..79660- (Nannochloropsis oceanica)
CAGCCACAGGCTGCCCGAAAACAAGCTTGTCGTCGCGTCGTCATATTGTC
GTCCCTATTGTGCCTTTGTGTGCAGGCCAAAGCCAGAAACCCCCCTCACG
CAGCATATTCATCATGGCCGCCTCGTCCCGCGCAACGCTGCAGTTCGTAG
GGCTGTTTGCCCTGGTTTTGGCAAGCACCACTTCGGCTATCTCAGTCCTC
TCCCGGACTCAAGCACCAGCATGCACGCAGAGACCAAGCCCACCGATGAT
GGCAATAGTCAACCCTTTCCATACCGAACGTCGAGGCGGAGCGGATGTTA
GAGGTCGGAAACGCGTGCCTCCCGCCCTTGCAGCCCCCCACACCTACACG
GGCAACAGGCGCATGTTGCCCGCGACGATCTCCAACCCGCTGACACTCCT
CAAGACCTTGGGCCGGGTGTACAGCAACTGGATGATGGAGCAACCCATCC
GCGCGAACCTGATCTCAGGCGTCTTGATGGTGGCTCTCGGAGATGGGATC
AGTCAAGCTATCGAAGTTGACCCCGAAACAGGCCTAAAAAAATGTAAATC
CTGGCGGGATCTTTCCCCCCGTCGCCTCGCCAATGCTGGGTTTGCGGGCG
CGGTTTTTAATGGTGTGTTGCTGCCGCAATGGTATTTGTTGATGCATAAG
GTGTCGCCTGGGGCAGAGACTGCGAAAACGATCGCAGCGAAGATTCTCGG
GAATTGCGTGGCGTGGGGATGTGTGGGCAATGCGGCTATCATGGCGATGA
GGCGGATGTTGGACGGGGAGAGCTGGGAGCAGACGGAGCGGGCGGTGAGG
AGGGACTTATGGGGGGTGATGAAGAATGATTATAAAATATGGCCTTTATA
TGACGTGTTGTGTTTTACATGTATCCCGAGACATATGCATGGTCTAAGCA
CGGGAACGTTGGGCATCGTATGGGCGGCTTATTTGTCGTACGTCACGCAC
ACCGAGGATCATTAGAGAGGGAGAAAGACGAGGAGGGCGCGGGAGAGAGG
GAGAAAGGGAAATGTTTTCTCTTTTTCTCTCCTTTTTTCATTCTTCTTTA
TCTTGAAGCGAGGGAGCAGAGTACCGGAAAAGAATGGAAGGGTTTGTGAT
TTGTTCTTGTGTGCATGTACGATGATAGGGAGTGTGTGTGTAAACTGAAC
GTTGACAAGGCCTTTGGAACGACTCCAGTGGCTGCCGCAGCCATTGCAGC
TGCGACAGACTCAAAGGCAGCAATTAACAACAGCTTGATTAAAATTAACA
ATGAGCGATGAGCAGGAAAGACGAAAATAGAAAAAAAGGGTTTCGAAATT
AAAGGAAATGGGCTGGCCTCGAAAGACAAGAAAATGAGGCAGCTCAAAAG
TTGCAGAATGCAATGTGCCTCGCTTCGCAAGGAACGGGGGGAACATAAGG
TGTTGGGG back to topCoding sequence (CDS) from alignment at scaffold_7:78253..79660- >mRNA_2852 ID=mRNA_2852|Name=jgi.p|Nanoce1779_2|583554|organism=Nannochloropsis oceanica|type=CDS|length=852bp|location=Sequence derived from alignment at scaffold_7:78253..79660- (Nannochloropsis oceanica)
ATGGCCGCCTCGTCCCGCGCAACGCTGCAGTTCGTAGGGCTGTTTGCCCT
GGTTTTGGCAAGCACCACTTCGGCTATCTCAGTCCTCTCCCGGACTCAAG
CACCAGCATGCACGCAGAGACCAAGCCCACCGATGATGGCAATAGTCAAC
CCTTTCCATACCGAACGTCGAGGCGGAGCGGATGTTAGAGGTCGGAAACG
CGTGCCTCCCGCCCTTGCAGCCCCCCACACCTACACGGGCAACAGGCGCA
TGTTGCCCGCGACGATCTCCAACCCGCTGACACTCCTCAAGACCTTGGGC
CGGGTGTACAGCAACTGGATGATGGAGCAACCCATCCGCGCGAACCTGAT
CTCAGGCGTCTTGATGGTGGCTCTCGGAGATGGGATCAGTCAAGCTATCG
AAGTTGACCCCGAAACAGGCCTAAAAAAATGTAAATCCTGGCGGGATCTT
TCCCCCCGTCGCCTCGCCAATGCTGGGTTTGCGGGCGCGGTTTTTAATGG
TGTGTTGCTGCCGCAATGGTATTTGTTGATGCATAAGGTGTCGCCTGGGG
CAGAGACTGCGAAAACGATCGCAGCGAAGATTCTCGGGAATTGCGTGGCG
TGGGGATGTGTGGGCAATGCGGCTATCATGGCGATGAGGCGGATGTTGGA
CGGGGAGAGCTGGGAGCAGACGGAGCGGGCGGTGAGGAGGGACTTATGGG
GGGTGATGAAGAATGATTATAAAATATGGCCTTTATATGACGTGTTGTGT
TTTACATGTATCCCGAGACATATGCATGGTCTAAGCACGGGAACGTTGGG
CATCGTATGGGCGGCTTATTTGTCGTACGTCACGCACACCGAGGATCATT
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