jgi.p|Nanoce1779_2|526295, mRNA_2847 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|526295
Unique NamemRNA_2847
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length993
Alignment locationscaffold_7:68661..69653 +

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Properties
Property NameValue
TranscriptId526381
TrackFilteredModels2
ProteinId526295
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:68661..69653 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526295gene_2847Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|526295mRNA_2847-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_2847CDS_2847Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_2847 ID=mRNA_2847|Name=jgi.p|Nanoce1779_2|526295|organism=Nannochloropsis oceanica|type=mRNA|length=993bp
ATGAAGGGGGGGGGGGGAGGAGGAGGAGCAGGGGGGGCTCGTCCTCGTCC
TCGTTTCCTCCCCCTATCCTTCCACGAAGCCACGCGTCTGGCCGCGAGGG
AACAAAAGTTTTTGGTCGTCTACCTGCACGCCCCCCTACACGAGCACACT
CCATCGTTCCTATCCCAAATTCTCAATACGGACACCCTCACGTCCTTCCT
CGATGACAATCTGGTGGTCTGGGGGGGGTCCATCCACTCGGCCGATGCCT
ACCATACCTCCCAGCTGCTGGATGCCTCCGCTTTCCCTTTTCTGGCCCTC
CTCGCCTGCCACGACGCGCCCCATCTCACCGTGCTAGAGCACATGGAGGG
GCTAGGCGGGGACGGAGGGAGGGAGGGAGGAATCGGAGTCGAAGGGGTGT
TGCAGCGTCTGACGGCGGCGATGGCCCGGCAGCAGGAGGTACTAGCAAGG
CAGGAGGCGGCGATGAGGGAGCGGACGGAGAGGATAAGGCTGCAAGAGGA
GCAGAATAGGGAGTATCAAGAAGCCCTAGAAGCGGACAGGAAGAGGGAAG
CAGACTTGGCGGCGGAGAGGGAGAGGGTGAAGGAGGAGGAGGAGAGGGAG
AAGAAGATGATGGAGGAGGCCAACGAGGAGAGAGAGAGGAAACGGAGGGA
GGCAGCCGAAAGAACGATGATGATAAAGGCGCGGCTACCGGCAGAGCCAC
CTATGGGGGATAAGGCGGCGTTGCGTCTACGCTTGCAGTTTCCACACGGA
AAGAAGATGGACAGGAGGTTTGACCGCGACGATACTCTCCAAGTAGTGCG
GGATTTTATTGATGTGTCGGTGGCCGAAGCGGAGGAAGAGGGCTGGGGGG
ACGGAAGCCGGAAGTTGGTAAATTATAGCTTATCGACTCCGTACCCGAAG
CGGACGTTTGGGGAGGAGGAAGTGGGCAAAACCTTGGCTGAGGTGGGCTT
GCACAGTGCCGACACAATATATATTCAGGACCTGGATGCGTAA
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protein sequence of jgi.p|Nanoce1779_2|526295

>mRNA_2847-protein ID=mRNA_2847-protein|Name=jgi.p|Nanoce1779_2|526295|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MKGGGGGGGAGGARPRPRFLPLSFHEATRLAAREQKFLVVYLHAPLHEHT
PSFLSQILNTDTLTSFLDDNLVVWGGSIHSADAYHTSQLLDASAFPFLAL
LACHDAPHLTVLEHMEGLGGDGGREGGIGVEGVLQRLTAAMARQQEVLAR
QEAAMRERTERIRLQEEQNREYQEALEADRKREADLAAERERVKEEEERE
KKMMEEANEERERKRREAAERTMMIKARLPAEPPMGDKAALRLRLQFPHG
KKMDRRFDRDDTLQVVRDFIDVSVAEAEEEGWGDGSRKLVNYSLSTPYPK
RTFGEEEVGKTLAEVGLHSADTIYIQDLDA*
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mRNA from alignment at scaffold_7:68661..69653+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2847 ID=mRNA_2847|Name=jgi.p|Nanoce1779_2|526295|organism=Nannochloropsis oceanica|type=mRNA|length=993bp|location=Sequence derived from alignment at scaffold_7:68661..69653+ (Nannochloropsis oceanica)
ATGAAGGGGGGGGGGGGAGGAGGAGGAGCAGGGGGGGCTCGTCCTCGTCC
TCGTTTCCTCCCCCTATCCTTCCACGAAGCCACGCGTCTGGCCGCGAGGG
AACAAAAGTTTTTGGTCGTCTACCTGCACGCCCCCCTACACGAGCACACT
CCATCGTTCCTATCCCAAATTCTCAATACGGACACCCTCACGTCCTTCCT
CGATGACAATCTGGTGGTCTGGGGGGGGTCCATCCACTCGGCCGATGCCT
ACCATACCTCCCAGCTGCTGGATGCCTCCGCTTTCCCTTTTCTGGCCCTC
CTCGCCTGCCACGACGCGCCCCATCTCACCGTGCTAGAGCACATGGAGGG
GCTAGGCGGGGACGGAGGGAGGGAGGGAGGAATCGGAGTCGAAGGGGTGT
TGCAGCGTCTGACGGCGGCGATGGCCCGGCAGCAGGAGGTACTAGCAAGG
CAGGAGGCGGCGATGAGGGAGCGGACGGAGAGGATAAGGCTGCAAGAGGA
GCAGAATAGGGAGTATCAAGAAGCCCTAGAAGCGGACAGGAAGAGGGAAG
CAGACTTGGCGGCGGAGAGGGAGAGGGTGAAGGAGGAGGAGGAGAGGGAG
AAGAAGATGATGGAGGAGGCCAACGAGGAGAGAGAGAGGAAACGGAGGGA
GGCAGCCGAAAGAACGATGATGATAAAGGCGCGGCTACCGGCAGAGCCAC
CTATGGGGGATAAGGCGGCGTTGCGTCTACGCTTGCAGTTTCCACACGGA
AAGAAGATGGACAGGAGGTTTGACCGCGACGATACTCTCCAAGTAGTGCG
GGATTTTATTGATGTGTCGGTGGCCGAAGCGGAGGAAGAGGGCTGGGGGG
ACGGAAGCCGGAAGTTGGTAAATTATAGCTTATCGACTCCGTACCCGAAG
CGGACGTTTGGGGAGGAGGAAGTGGGCAAAACCTTGGCTGAGGTGGGCTT
GCACAGTGCCGACACAATATATATTCAGGACCTGGATGCGTAA
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Coding sequence (CDS) from alignment at scaffold_7:68661..69653+

>mRNA_2847 ID=mRNA_2847|Name=jgi.p|Nanoce1779_2|526295|organism=Nannochloropsis oceanica|type=CDS|length=993bp|location=Sequence derived from alignment at scaffold_7:68661..69653+ (Nannochloropsis oceanica)
ATGAAGGGGGGGGGGGGAGGAGGAGGAGCAGGGGGGGCTCGTCCTCGTCC
TCGTTTCCTCCCCCTATCCTTCCACGAAGCCACGCGTCTGGCCGCGAGGG
AACAAAAGTTTTTGGTCGTCTACCTGCACGCCCCCCTACACGAGCACACT
CCATCGTTCCTATCCCAAATTCTCAATACGGACACCCTCACGTCCTTCCT
CGATGACAATCTGGTGGTCTGGGGGGGGTCCATCCACTCGGCCGATGCCT
ACCATACCTCCCAGCTGCTGGATGCCTCCGCTTTCCCTTTTCTGGCCCTC
CTCGCCTGCCACGACGCGCCCCATCTCACCGTGCTAGAGCACATGGAGGG
GCTAGGCGGGGACGGAGGGAGGGAGGGAGGAATCGGAGTCGAAGGGGTGT
TGCAGCGTCTGACGGCGGCGATGGCCCGGCAGCAGGAGGTACTAGCAAGG
CAGGAGGCGGCGATGAGGGAGCGGACGGAGAGGATAAGGCTGCAAGAGGA
GCAGAATAGGGAGTATCAAGAAGCCCTAGAAGCGGACAGGAAGAGGGAAG
CAGACTTGGCGGCGGAGAGGGAGAGGGTGAAGGAGGAGGAGGAGAGGGAG
AAGAAGATGATGGAGGAGGCCAACGAGGAGAGAGAGAGGAAACGGAGGGA
GGCAGCCGAAAGAACGATGATGATAAAGGCGCGGCTACCGGCAGAGCCAC
CTATGGGGGATAAGGCGGCGTTGCGTCTACGCTTGCAGTTTCCACACGGA
AAGAAGATGGACAGGAGGTTTGACCGCGACGATACTCTCCAAGTAGTGCG
GGATTTTATTGATGTGTCGGTGGCCGAAGCGGAGGAAGAGGGCTGGGGGG
ACGGAAGCCGGAAGTTGGTAAATTATAGCTTATCGACTCCGTACCCGAAG
CGGACGTTTGGGGAGGAGGAAGTGGGCAAAACCTTGGCTGAGGTGGGCTT
GCACAGTGCCGACACAATATATATTCAGGACCTGGATGCGTAA
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Synonyms
Publications