Properties
| Property Name | Value |
|---|
| TranscriptId | 526840 |
| Track | FilteredModels2 |
| ProteinId | 526754 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:53132..55090 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2841 ID=mRNA_2841|Name=jgi.p|Nanoce1779_2|526754|organism=Nannochloropsis oceanica|type=mRNA|length=1605bp
ATGGACCCCAACGATCCCTCTCTCGCCACACTCTGCGCCCAGCTCGGTGT
TTCCAATACCTATGTGACGCAAGGATTCGAAGCCGGGATCCGGAAACGCC
ATGCCTTATATAAACAACTGGTCGCGCACCGGCGCTTGCCCGACCAAGGC
TGGGACGACGAGACAATTGAGGGAGTCCTGCACGACTTGGCCATGATGGA
TAGCAACAACTTTCTCGGCAACGTCGGCGTCGGGGAGAGAGAAGCCCGGA
TTTTTTCTTCCTTGGTGCGACGACGGCATTTTGGCCTAGGACACGGGATG
GGGAGGTCGGGTGATATCAATGAGCCACAGCCCAAGGCAGCAGGATCGTC
GTTGCTGGTAAGATTAACCAACCTTCTGGCATTAGACGCAGTGCGTCTAG
CGGGTTTGACACGGATGCAGGACTGCGTGGTCTTGCCGTTGGCCACGGGA
ATGGCAATGACCATGACGCTATTGACCTTGCGGCAGGACGCCGAGAAGAA
GAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGGAAAG
CAGCAGAAAAGACGTCGACGTTACGTTCTGCATCTTCGTTAGCACCTTTA
CTCCTGCCTTATCCTCGCCCTCACTACGTCATCTTTCCCCGAATCGACCA
AAAATCCTGCCTTAAAGCCATCGTCACCGCCGGCCTCACGCCCCTCCTCC
TCCCCCCCATCCTCTCCCCAACCACCGACGAACTCCAAACCAACCTACCC
CTCCTCCTCTCCCTCCTGCAAGACCACCCAGCAAAGACTAATATCCTGGC
TATACTCTCCACTACCTCATGTTTCGCTCCTCGTGCCCCTGATAACATTG
TTGAAATCGCCCGGCTAGCCTCTGAATTTAATATCTCCCACATAATAAAC
AACGCCTACGGCCTACAATGCTCTAAAACGACGCACCAAATCAACGAGGC
ATGTAGAGTAGGAAGAGTAGATGCCGTTGTACAGAGTACGGATAAAAATT
TTCTAGTCCCCGTGGGGGGTTCTGTGGTGGTCCTCGTCACCCGCCTCTGT
AGGATGTATCCTGGCCGTGCCAACGCCACCCCTCTTCATGACCTCTTCAT
CACCCTCCTCTCTCTTGGTCGTTCCGGATATCTTTCCCTTCTACAAGAAC
GAAAGAGCCTCCTCCCGCTCATGAGGGGGGGGCTAAGGGCCATCGCCGAG
AAGCACGGTGGGCGGCTCCTTTCCACCCCCGGAAACACCATATCATTTGC
CGTTACGCTCAACGGTTTGTTATGCTCAAAGAAGGGGGACGAAGCGAGGA
ACGATGAGGACGATGCCGAGGACGAGGAAGACGAGCTGTCCCTCTTAGGG
GCCATGCTTTTCACGCGAGGCGTTTCAGGGACAAGAGTGATGAAGACGGT
GGCCGGTTTGTCTTTTGCTGGTTATGGCTCTCATTCTGATGCACGGTATC
CGCCGGGGCCTTACTTGACGGCGGCGTGTGCGCTGGGGGTGAGGAAGGAG
GAGGTGGAGGAATTCTTAAAGAAACTGGACCGGGCCATGACGGATTTCAT
GAAGATGAGGGCGAAGAAAGGCAGGAGGAAGAAGGAGGAAAGGGCGACAA
GATGA back to topprotein sequence of jgi.p|Nanoce1779_2|526754 >mRNA_2841-protein ID=mRNA_2841-protein|Name=jgi.p|Nanoce1779_2|526754|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MDPNDPSLATLCAQLGVSNTYVTQGFEAGIRKRHALYKQLVAHRRLPDQG
WDDETIEGVLHDLAMMDSNNFLGNVGVGEREARIFSSLVRRRHFGLGHGM
GRSGDINEPQPKAAGSSLLVRLTNLLALDAVRLAGLTRMQDCVVLPLATG
MAMTMTLLTLRQDAEKKKEEEEEEEEEEEEEGKAAEKTSTLRSASSLAPL
LLPYPRPHYVIFPRIDQKSCLKAIVTAGLTPLLLPPILSPTTDELQTNLP
LLLSLLQDHPAKTNILAILSTTSCFAPRAPDNIVEIARLASEFNISHIIN
NAYGLQCSKTTHQINEACRVGRVDAVVQSTDKNFLVPVGGSVVVLVTRLC
RMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAE
KHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEDDAEDEEDELSLLG
AMLFTRGVSGTRVMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKE
EVEEFLKKLDRAMTDFMKMRAKKGRRKKEERATR* back to topmRNA from alignment at scaffold_7:53132..55090- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2841 ID=mRNA_2841|Name=jgi.p|Nanoce1779_2|526754|organism=Nannochloropsis oceanica|type=mRNA|length=1959bp|location=Sequence derived from alignment at scaffold_7:53132..55090- (Nannochloropsis oceanica)
ATGGACCCCAACGATCCCTCTCTCGCCACACTCTGCGCCCAGCTCGGTGT
TTCCAATACCTATGTGACGCAAGGATTCGAAGCCGGGATCCGGAAACGCC
ATGCCTTATATAAACAACTGGTCGCGCACCGGCGCTTGCCCGACCAAGGC
TGGGACGACGAGACAATTGAGGGAGTCCTGCACGACTTGGCCATGATGGA
TAGCAACAACTTTCTCGGCAACGTCGGCGTCGGGGAGAGAGAAGCCCGGA
TTTTTTCTTCCTTGGTGCGACGACGGCATTTTGGCCTAGGACACGGGATG
GGGAGGTCGGGTGATATCAATGAGCCACAGCCCAAGGCAGCAGGATCGTC
GTTGCTGGTAAGATTAACCAACCTTCTGGCATTAGACGCAGTGCGTCTAG
CGGGTTTGACACGGATGCAGGACTGCGTGGTCTTGCCGTTGGCCACGGGA
ATGGCAATGACCATGACGCTATTGACCTTGCGGCAGGACGCCGAGAAGAA
GAAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGGAAAG
CAGCAGAAAAGACGTCGACGTTACGTTCTGCATCTTCGTTAGCACCTTTA
CTCCTGCCTTATCCTCGCCCTCACTACGTCATCTTTCCCCGAATCGACCA
AAAATCCTGCCTTAAAGCCATCGTCACCGCCGGCCTCACGCCCCTCCTCC
TCCCCCCCATCCTCTCCCCAACCACCGACGAACTCCAAACCAACCTACCC
CTCCTCCTCTCCCTCCTGCAAGACCACCCAGCAAAGACTAATATCCTGGC
TATACTCTCCACTACCTCATGTTTCGCTCCTCGTGCCCCTGATAACATTG
TTGAAATCGCCCGGCTAGCCTCTGAATTTAATATCTCCCACATAATAAAC
AACGCCTACGGCCTACAATGCTCTAAAACGACGCACCAAATCAACGAGGC
ATGTAGAGTAGGAAGAGTAGATGCCGTTGTACAGAGTACGGATAAAAATT
TTCTAGTCCCCGTGGGGGGTTCTGTGGTGGTGTCGCCAAGAGGAAGGGGG
GTGGGGAGGGAGGGAGGAGCGGGGGAAAGGGAGGGAAAAGCGGATGCAGG
AGGAGAGAAAGTCGGAAAGAAGGAAAAAGAGGCAGGCGCATGGACAACAC
CACCAAATGCAGGAATGTCAGCCATTAGAACCACCACAACCACCCCCTAC
AACAACAGCAGTAGCCACAGTACCAGCAGCCCCTCGCCAACGTCTCCCAA
CCCCCCTTCCATACCTCCCTCTAGCCTCGTCACCCGCCTCTGTAGGATGT
ATCCTGGCCGTGCCAACGCCACCCCTCTTCATGACCTCTTCATCACCCTC
CTCTCTCTTGGTCGTTCCGGATATCTTTCCCTTCTACAAGAACGAAAGAG
CCTCCTCCCGCTCATGAGGGGGGGGCTAAGGGCCATCGCCGAGAAGCACG
GTGGGCGGCTCCTTTCCACCCCCGGAAACACCATATCATTTGCCGTTACG
CTCAACGGTTTGTTATGCTCAAAGAAGGGGGACGAAGCGAGGAACGATGA
GGACGATGCCGAGGACGAGGAAGACGAGCTGTCCCTCTTAGGGGCCATGC
TTTTCACGCGAGGCGTTTCAGGGACAAGAGTGGTTATCCCTGCCCCCGCC
TATTCCTCCCTCCATTCCTCGCTCTCGCCCTCGGCCACGCGCTCCTCCTC
CTCCTCCTCCACCACCCCCAATTCGTCCACTCCCCACAGGAAGATGAAGA
CGGTGGCCGGTTTGTCTTTTGCTGGTTATGGCTCTCATTCTGATGCACGG
TATCCGCCGGGGCCTTACTTGACGGCGGCGTGTGCGCTGGGGGTGAGGAA
GGAGGAGGTGGAGGAATTCTTAAAGAAACTGGACCGGGCCATGACGGATT
TCATGAAGATGAGGGCGAAGAAAGGCAGGAGGAAGAAGGAGGAAAGGGCG
ACAAGATGA back to topCoding sequence (CDS) from alignment at scaffold_7:53132..55090- >mRNA_2841 ID=mRNA_2841|Name=jgi.p|Nanoce1779_2|526754|organism=Nannochloropsis oceanica|type=CDS|length=4815bp|location=Sequence derived from alignment at scaffold_7:53132..55090- (Nannochloropsis oceanica)
ATGAAGACGGTGGCCGGTTTGTCTTTTGCTGGTTATGGCTCTCATTCTGA
TGCACGGTATCCGCCGGGGCCTTACTTGACGGCGGCGTGTGCGCTGGGGG
TGAGGAAGGAGGAGGTGGAGGAATTCTTAAAGAAACTGGACCGGGCCATG
ACGGATTTCATGAAGATGAGGGCGAAGAAAGGCAGGAGGAAGAAGGAGGA
AAGGGCGACAAGATGACCTCGTCACCCGCCTCTGTAGGATGTATCCTGGC
CGTGCCAACGCCACCCCTCTTCATGACCTCTTCATCACCCTCCTCTCTCT
TGGTCGTTCCGGATATCTTTCCCTTCTACAAGAACGAAAGAGCCTCCTCC
CGCTCATGAGGGGGGGGCTAAGGGCCATCGCCGAGAAGCACGGTGGGCGG
CTCCTTTCCACCCCCGGAAACACCATATCATTTGCCGTTACGCTCAACGG
TTTGTTATGCTCAAAGAAGGGGGACGAAGCGAGGAACGATGAGGACGATG
CCGAGGACGAGGAAGACGAGCTGTCCCTCTTAGGGGCCATGCTTTTCACG
CGAGGCGTTTCAGGGACAAGAGTGATGGACCCCAACGATCCCTCTCTCGC
CACACTCTGCGCCCAGCTCGGTGTTTCCAATACCTATGTGACGCAAGGAT
TCGAAGCCGGGATCCGGAAACGCCATGCCTTATATAAACAACTGGTCGCG
CACCGGCGCTTGCCCGACCAAGGCTGGGACGACGAGACAATTGAGGGAGT
CCTGCACGACTTGGCCATGATGGATAGCAACAACTTTCTCGGCAACGTCG
GCGTCGGGGAGAGAGAAGCCCGGATTTTTTCTTCCTTGGTGCGACGACGG
CATTTTGGCCTAGGACACGGGATGGGGAGGTCGGGTGATATCAATGAGCC
ACAGCCCAAGGCAGCAGGATCGTCGTTGCTGGTAAGATTAACCAACCTTC
TGGCATTAGACGCAGTGCGTCTAGCGGGTTTGACACGGATGCAGGACTGC
GTGGTCTTGCCGTTGGCCACGGGAATGGCAATGACCATGACGCTATTGAC
CTTGCGGCAGGACGCCGAGAAGAAGAAGGAGGAGGAGGAGGAAGAGGAGG
AGGAGGAGGAGGAGGAGGGGAAAGCAGCAGAAAAGACGTCGACGTTACGT
TCTGCATCTTCGTTAGCACCTTTACTCCTGCCTTATCCTCGCCCTCACTA
CGTCATCTTTCCCCGAATCGACCAAAAATCCTGCCTTAAAGCCATCGTCA
CCGCCGGCCTCACGCCCCTCCTCCTCCCCCCCATCCTCTCCCCAACCACC
GACGAACTCCAAACCAACCTACCCCTCCTCCTCTCCCTCCTGCAAGACCA
CCCAGCAAAGACTAATATCCTGGCTATACTCTCCACTACCTCATGTTTCG
CTCCTCGTGCCCCTGATAACATTGTTGAAATCGCCCGGCTAGCCTCTGAA
TTTAATATCTCCCACATAATAAACAACGCCTACGGCCTACAATGCTCTAA
AACGACGCACCAAATCAACGAGGCATGTAGAGTAGGAAGAGTAGATGCCG
TTGTACAGAGTACGGATAAAAATTTTCTAGTCCCCGTGGGGGGTTCTGTG
GTGGTATGAAGACGGTGGCCGGTTTGTCTTTTGCTGGTTATGGCTCTCAT
TCTGATGCACGGTATCCGCCGGGGCCTTACTTGACGGCGGCGTGTGCGCT
GGGGGTGAGGAAGGAGGAGGTGGAGGAATTCTTAAAGAAACTGGACCGGG
CCATGACGGATTTCATGAAGATGAGGGCGAAGAAAGGCAGGAGGAAGAAG
GAGGAAAGGGCGACAAGATGACCTCGTCACCCGCCTCTGTAGGATGTATC
CTGGCCGTGCCAACGCCACCCCTCTTCATGACCTCTTCATCACCCTCCTC
TCTCTTGGTCGTTCCGGATATCTTTCCCTTCTACAAGAACGAAAGAGCCT
CCTCCCGCTCATGAGGGGGGGGCTAAGGGCCATCGCCGAGAAGCACGGTG
GGCGGCTCCTTTCCACCCCCGGAAACACCATATCATTTGCCGTTACGCTC
AACGGTTTGTTATGCTCAAAGAAGGGGGACGAAGCGAGGAACGATGAGGA
CGATGCCGAGGACGAGGAAGACGAGCTGTCCCTCTTAGGGGCCATGCTTT
TCACGCGAGGCGTTTCAGGGACAAGAGTGATGGACCCCAACGATCCCTCT
CTCGCCACACTCTGCGCCCAGCTCGGTGTTTCCAATACCTATGTGACGCA
AGGATTCGAAGCCGGGATCCGGAAACGCCATGCCTTATATAAACAACTGG
TCGCGCACCGGCGCTTGCCCGACCAAGGCTGGGACGACGAGACAATTGAG
GGAGTCCTGCACGACTTGGCCATGATGGATAGCAACAACTTTCTCGGCAA
CGTCGGCGTCGGGGAGAGAGAAGCCCGGATTTTTTCTTCCTTGGTGCGAC
GACGGCATTTTGGCCTAGGACACGGGATGGGGAGGTCGGGTGATATCAAT
GAGCCACAGCCCAAGGCAGCAGGATCGTCGTTGCTGGTAAGATTAACCAA
CCTTCTGGCATTAGACGCAGTGCGTCTAGCGGGTTTGACACGGATGCAGG
ACTGCGTGGTCTTGCCGTTGGCCACGGGAATGGCAATGACCATGACGCTA
TTGACCTTGCGGCAGGACGCCGAGAAGAAGAAGGAGGAGGAGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGAGGGGAAAGCAGCAGAAAAGACGTCGACGT
TACGTTCTGCATCTTCGTTAGCACCTTTACTCCTGCCTTATCCTCGCCCT
CACTACGTCATCTTTCCCCGAATCGACCAAAAATCCTGCCTTAAAGCCAT
CGTCACCGCCGGCCTCACGCCCCTCCTCCTCCCCCCCATCCTCTCCCCAA
CCACCGACGAACTCCAAACCAACCTACCCCTCCTCCTCTCCCTCCTGCAA
GACCACCCAGCAAAGACTAATATCCTGGCTATACTCTCCACTACCTCATG
TTTCGCTCCTCGTGCCCCTGATAACATTGTTGAAATCGCCCGGCTAGCCT
CTGAATTTAATATCTCCCACATAATAAACAACGCCTACGGCCTACAATGC
TCTAAAACGACGCACCAAATCAACGAGGCATGTAGAGTAGGAAGAGTAGA
TGCCGTTGTACAGAGTACGGATAAAAATTTTCTAGTCCCCGTGGGGGGTT
CTGTGGTGGTATGAAGACGGTGGCCGGTTTGTCTTTTGCTGGTTATGGCT
CTCATTCTGATGCACGGTATCCGCCGGGGCCTTACTTGACGGCGGCGTGT
GCGCTGGGGGTGAGGAAGGAGGAGGTGGAGGAATTCTTAAAGAAACTGGA
CCGGGCCATGACGGATTTCATGAAGATGAGGGCGAAGAAAGGCAGGAGGA
AGAAGGAGGAAAGGGCGACAAGATGACCTCGTCACCCGCCTCTGTAGGAT
GTATCCTGGCCGTGCCAACGCCACCCCTCTTCATGACCTCTTCATCACCC
TCCTCTCTCTTGGTCGTTCCGGATATCTTTCCCTTCTACAAGAACGAAAG
AGCCTCCTCCCGCTCATGAGGGGGGGGCTAAGGGCCATCGCCGAGAAGCA
CGGTGGGCGGCTCCTTTCCACCCCCGGAAACACCATATCATTTGCCGTTA
CGCTCAACGGTTTGTTATGCTCAAAGAAGGGGGACGAAGCGAGGAACGAT
GAGGACGATGCCGAGGACGAGGAAGACGAGCTGTCCCTCTTAGGGGCCAT
GCTTTTCACGCGAGGCGTTTCAGGGACAAGAGTGATGGACCCCAACGATC
CCTCTCTCGCCACACTCTGCGCCCAGCTCGGTGTTTCCAATACCTATGTG
ACGCAAGGATTCGAAGCCGGGATCCGGAAACGCCATGCCTTATATAAACA
ACTGGTCGCGCACCGGCGCTTGCCCGACCAAGGCTGGGACGACGAGACAA
TTGAGGGAGTCCTGCACGACTTGGCCATGATGGATAGCAACAACTTTCTC
GGCAACGTCGGCGTCGGGGAGAGAGAAGCCCGGATTTTTTCTTCCTTGGT
GCGACGACGGCATTTTGGCCTAGGACACGGGATGGGGAGGTCGGGTGATA
TCAATGAGCCACAGCCCAAGGCAGCAGGATCGTCGTTGCTGGTAAGATTA
ACCAACCTTCTGGCATTAGACGCAGTGCGTCTAGCGGGTTTGACACGGAT
GCAGGACTGCGTGGTCTTGCCGTTGGCCACGGGAATGGCAATGACCATGA
CGCTATTGACCTTGCGGCAGGACGCCGAGAAGAAGAAGGAGGAGGAGGAG
GAAGAGGAGGAGGAGGAGGAGGAGGAGGGGAAAGCAGCAGAAAAGACGTC
GACGTTACGTTCTGCATCTTCGTTAGCACCTTTACTCCTGCCTTATCCTC
GCCCTCACTACGTCATCTTTCCCCGAATCGACCAAAAATCCTGCCTTAAA
GCCATCGTCACCGCCGGCCTCACGCCCCTCCTCCTCCCCCCCATCCTCTC
CCCAACCACCGACGAACTCCAAACCAACCTACCCCTCCTCCTCTCCCTCC
TGCAAGACCACCCAGCAAAGACTAATATCCTGGCTATACTCTCCACTACC
TCATGTTTCGCTCCTCGTGCCCCTGATAACATTGTTGAAATCGCCCGGCT
AGCCTCTGAATTTAATATCTCCCACATAATAAACAACGCCTACGGCCTAC
AATGCTCTAAAACGACGCACCAAATCAACGAGGCATGTAGAGTAGGAAGA
GTAGATGCCGTTGTACAGAGTACGGATAAAAATTTTCTAGTCCCCGTGGG
GGGTTCTGTGGTGGT back to top
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