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Properties
| Property Name | Value |
|---|
| TranscriptId | 629222 |
| Track | FilteredModels2 |
| ProteinId | 629136 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:33959..36908 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2833 ID=mRNA_2833|Name=jgi.p|Nanoce1779_2|629136|organism=Nannochloropsis oceanica|type=mRNA|length=2810bp
TAGGTTCCAGGCCTGCTTTCCTCCCGTCGTCCGGCTGCCCTTCATCGTCG
CCGTTAATAGCACCAACATCAGCTCCAGCCTCCCCACCCCACGATTTGGA
AGAATAGACTGTCATGGCCAGGAGACGGACACGGACGAAGCAAATGACCA
CCAAGGCCACGGCAGGAGGCATACTATTGGCGTGTTGCTCTGTTAGCGCT
TTCTTCTGGGGCAGAAACCCCCCTTCATCGTCCTTGTCCTCACGGCAGGC
TTGGCGTGCATCAAATCGTCACCACTTCAGACCACCCTCTTTCTCCCCCT
CCTCCTCCGCCTCCATATGGCTCCACTCATCGTTATCACCCAGCGGCGAC
AGCTGCAGCAGCACCATCAGAAGCAGTTGTTGTAGAAGACGTCTTTCCTT
CTCCTCCACCGCCATCGCCTCCATCAAAAACGACGACCAACAACAAGAGC
CCAACAGAGATACAGCACCATCCTCTCCCCCACCCTCCACCCCTGCCTCC
TCAGCCTCCTCCTCCTCCTCCCCCCCCCTCAGCAGATGTATCGCAGCTTC
CACCTCCATCCTTATTATCATCATCACTAGAAGAAGACGCAGCAGCAGCA
GCCTCGAGAGATCCCTACACCGGCACATACTCCACCTACGGTTATCCCCC
TCCCCTTCCATCCTATTTCTACCCTCCTCCTGCCTCCTTCTACCCTCCTC
CTCCTCCCCCTTCATCCCTCGATCCCCCTGCTTCCTCCCTCTCCACACCC
TTATCATCGTCCTCCTCTGCTGCTGCTGACGGTGATAGCAGCGTCACCTC
CACGGCGTCTGCTCCTCCTTCACCGTACCCTGATCCTTATGCTGGCTTTT
ACTACCCTCCTCCCTCCTTCTATCCTCCTCCGCCCCCTCCTCCTCCATCA
TCATCTTCGCAAGACGAAGGCATGTCCCAGGAGCAGCAGCAACAGCGGTG
GATGGACGCAGCTTATGGCTCTTCTGTTTCCAACCAAACCGTCGCAGGAG
CAGGGGGAGGGGAAGGAGTGATGGACGGGTGGCAAGATGCCTATGGTCGG
AGTATGTATGGCTATTATCCCCCTCCGCCTCCTTACGGATATGACCCATA
CTACGCTGCTGCTGCTGCTGCTTCGTGGCAGGAGGAGGAGGAAGGATGGA
GCGAGGGCGAGGACGAGGACGAGGACGAGGAGGAGTGGTGGAGTGATGAG
GAGGATGATGGTTATTACAGTGACGAGGAGGATGAGGAGGATGAGGGCTG
GAGGGAGGAGGAGGAAGAGGAGTGGAGGAGGTCGAAGGCAGGGATGGAAG
ACGATGTTGAGGAGGAGGGAGGGAGGGATGGCGGGTTGGATGATCTGATA
AGTGAGGCGATTACCTCGGTGACGCTTGGGGAGAAGGCCGAGGATGAGGG
GGACGAAGGAAGCGAGATAGGGAAGGAGAAAGGGAAGGAAGGGGAGCAGA
CACAGTCTATGTCGCAGATGGGGGAGGAGGTGGCGGTGGAGGAGTCGGAG
GGAGTGAAGGAGGAAGAGGAGGAGGGGGCACTTTCAGTTCGAAAGGAGGG
CGAGGAGGAGGGGCAGGAGCAACCGCAGCAAGAAGCAGCCAAAGATGAAA
GGGATATTCAAGTCGCTGATGACAAAGATAAGGATGAGGACGAGAGGGAA
GGAGCGGAGGCAGGAAGCAAGGATGATGAAGAATCCCCTGTGTCTTCCCT
TGATTCCTCTGGCGAGGAACTAAAAGAGAAGGAGGGCGTGGACGAAGACG
ACAGCAACACTCCCGCCTCAGTCTCCTTTTCTGCCTCCCTTGCCCGCGCT
GCCGGCACGGCCTCTGCTGCCTTCTCCTCCTCCATGGCCACTGCCCCTCT
CCCCTCCTCCGCCTCCCTCCCTTCCCCCGAAGAACCCAACCCCTTCGAAC
CCACGACCCCTTCCTCCCCCCCTTCCTCCCCCCCTTCCTCCTCGGAGACG
CCTGAAGCCAAGCCCTGGTGGTCCTTCCCCTCCTCCTCCTCCTCCTCCTC
CTCCTCTTCCTCCAGCGGGGCCCCCGATCCTTGGTGGAAAATGAAGTATT
TGGAGCTGGTGGAGGGCACATCATTTGACCCTATGGAGGAAGGAAAAAGG
CGGTCAATTTTTGGGTATTATCAAAGAGAGGCGGAGGAGGTGCAGGACCT
GCCGTTCTTGCCAGGAGGTGACCCGGGGGAGGAGGTTGAGCTTCCTGTCT
TCAGTCGTGCGCAATTCGTGAATACGACGTGGACGATTGGGATAGTAGGA
GGGGGGGAGGGGGGGTGGAATCCGTTTAAAAAAGTGCGGAGGACGAGGGT
GTTTTTCAGGGAGGACGGACGAGTGATTTGGGTGAATGGGGGAAACATCG
GGGAGTGGAGTTATGACGCGAAGAGCAACGTGTTTAGGTTTGGAAGGGAG
ACTTTTTTAAGTTGGAATGGAAGGAGGAGTTTCCCGACGCTGCTGACGGA
GGACCGGTCGCTTTATTACATGCAGGGCTTTGTGATTGGCTGGGCACCGT
TTAAGCCATTGAGTGTGTATGGGCTTTGGCAGATGTACCGGGATGACGTG
AGTGCGGAGGAGCGAGGGACGGCACCGTGGGAGGAGGAAGATGAGGGGGC
GGAGGAGGGGGAGAACGGGGAGAAGAAGAGGATTGTGAGAGGGTAGATAG
GGGTATGGATAAATGGGAATAGGAAGAGATGGCAGAAGAAAAATAAATAG
AAAGCATTTACTCATAAAGGCAGCTTACACACACGCGAGTGAGTGGTCAT
AAGACGAAGAGCAGACGAAGAGAAATAAGGAAAAAGGTAAAAAAGGAAAA
TGTGAGGTGC back to topprotein sequence of jgi.p|Nanoce1779_2|629136 >mRNA_2833-protein ID=mRNA_2833-protein|Name=jgi.p|Nanoce1779_2|629136|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp
MSQEQQQQRWMDAAYGSSVSNQTVAGAGGGEGVMDGWQDAYGRSMYGYYP
PPPPYGYDPYYAAAAAASWQEEEEGWSEGEDEDEDEEEWWSDEEDDGYYS
DEEDEEDEGWREEEEEEWRRSKAGMEDDVEEEGGRDGGLDDLISEAITSV
TLGEKAEDEGDEGSEIGKEKGKEGEQTQSMSQMGEEVAVEESEGVKEEEE
EGALSVRKEGEEEGQEQPQQEAAKDERDIQVADDKDKDEDEREGAEAGSK
DDEESPVSSLDSSGEELKEKEGVDEDDSNTPASVSFSASLARAAGTASAA
FSSSMATAPLPSSASLPSPEEPNPFEPTTPSSPPSSPPSSSETPEAKPWW
SFPSSSSSSSSSSSSGAPDPWWKMKYLELVEGTSFDPMEEGKRRSIFGYY
QREAEEVQDLPFLPGGDPGEEVELPVFSRAQFVNTTWTIGIVGGGEGGWN
PFKKVRRTRVFFREDGRVIWVNGGNIGEWSYDAKSNVFRFGRETFLSWNG
RRSFPTLLTEDRSLYYMQGFVIGWAPFKPLSVYGLWQMYRDDVSAEERGT
APWEEEDEGAEEGENGEKKRIVRG* back to topmRNA from alignment at scaffold_7:33959..36908- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2833 ID=mRNA_2833|Name=jgi.p|Nanoce1779_2|629136|organism=Nannochloropsis oceanica|type=mRNA|length=2950bp|location=Sequence derived from alignment at scaffold_7:33959..36908- (Nannochloropsis oceanica)
TAGGTTCCAGGCCTGCTTTCCTCCCGTCGTCCGGCTGCCCTTCATCGTCG
CCGTTAATAGCACCAACATCAGCTCCAGCCTCCCCACCCCACGATTTGGA
AGAATAGACTGTCATGGCCAGGAGACGGACACGGACGAAGCAAATGACCA
CCAAGGCCACGGCAGGAGGCATACTATTGGCGTGTTGCTCTGGTAATTTC
TGTGGAGAGATTGTAGAATGGAGAGAGACCTCAGTGTTGCGTGCTACGTG
CATGCATCATCACCCCTTCAACATTACGCCTCTCCCCTCACCTACCCTCC
CTACCTCTCTCCCTTCCTCACCTAATGATCAGTTAGCGCTTTCTTCTGGG
GCAGAAACCCCCCTTCATCGTCCTTGTCCTCACGGCAGGCTTGGCGTGCA
TCAAATCGTCACCACTTCAGACCACCCTCTTTCTCCCCCTCCTCCTCCGC
CTCCATATGGCTCCACTCATCGTTATCACCCAGCGGCGACAGCTGCAGCA
GCACCATCAGAAGCAGTTGTTGTAGAAGACGTCTTTCCTTCTCCTCCACC
GCCATCGCCTCCATCAAAAACGACGACCAACAACAAGAGCCCAACAGAGA
TACAGCACCATCCTCTCCCCCACCCTCCACCCCTGCCTCCTCAGCCTCCT
CCTCCTCCTCCCCCCCCCTCAGCAGATGTATCGCAGCTTCCACCTCCATC
CTTATTATCATCATCACTAGAAGAAGACGCAGCAGCAGCAGCCTCGAGAG
ATCCCTACACCGGCACATACTCCACCTACGGTTATCCCCCTCCCCTTCCA
TCCTATTTCTACCCTCCTCCTGCCTCCTTCTACCCTCCTCCTCCTCCCCC
TTCATCCCTCGATCCCCCTGCTTCCTCCCTCTCCACACCCTTATCATCGT
CCTCCTCTGCTGCTGCTGACGGTGATAGCAGCGTCACCTCCACGGCGTCT
GCTCCTCCTTCACCGTACCCTGATCCTTATGCTGGCTTTTACTACCCTCC
TCCCTCCTTCTATCCTCCTCCGCCCCCTCCTCCTCCATCATCATCTTCGC
AAGACGAAGGCATGTCCCAGGAGCAGCAGCAACAGCGGTGGATGGACGCA
GCTTATGGCTCTTCTGTTTCCAACCAAACCGTCGCAGGAGCAGGGGGAGG
GGAAGGAGTGATGGACGGGTGGCAAGATGCCTATGGTCGGAGTATGTATG
GCTATTATCCCCCTCCGCCTCCTTACGGATATGACCCATACTACGCTGCT
GCTGCTGCTGCTTCGTGGCAGGAGGAGGAGGAAGGATGGAGCGAGGGCGA
GGACGAGGACGAGGACGAGGAGGAGTGGTGGAGTGATGAGGAGGATGATG
GTTATTACAGTGACGAGGAGGATGAGGAGGATGAGGGCTGGAGGGAGGAG
GAGGAAGAGGAGTGGAGGAGGTCGAAGGCAGGGATGGAAGACGATGTTGA
GGAGGAGGGAGGGAGGGATGGCGGGTTGGATGATCTGATAAGTGAGGCGA
TTACCTCGGTGACGCTTGGGGAGAAGGCCGAGGATGAGGGGGACGAAGGA
AGCGAGATAGGGAAGGAGAAAGGGAAGGAAGGGGAGCAGACACAGTCTAT
GTCGCAGATGGGGGAGGAGGTGGCGGTGGAGGAGTCGGAGGGAGTGAAGG
AGGAAGAGGAGGAGGGGGCACTTTCAGTTCGAAAGGAGGGCGAGGAGGAG
GGGCAGGAGCAACCGCAGCAAGAAGCAGCCAAAGATGAAAGGGATATTCA
AGTCGCTGATGACAAAGATAAGGATGAGGACGAGAGGGAAGGAGCGGAGG
CAGGAAGCAAGGATGATGAAGAATCCCCTGTGTCTTCCCTTGATTCCTCT
GGCGAGGAACTAAAAGAGAAGGAGGGCGTGGACGAAGACGACAGCAACAC
TCCCGCCTCAGTCTCCTTTTCTGCCTCCCTTGCCCGCGCTGCCGGCACGG
CCTCTGCTGCCTTCTCCTCCTCCATGGCCACTGCCCCTCTCCCCTCCTCC
GCCTCCCTCCCTTCCCCCGAAGAACCCAACCCCTTCGAACCCACGACCCC
TTCCTCCCCCCCTTCCTCCCCCCCTTCCTCCTCGGAGACGCCTGAAGCCA
AGCCCTGGTGGTCCTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCC
TCCAGCGGGGCCCCCGATCCTTGGTGGAAAATGAAGTATTTGGAGCTGGT
GGAGGGCACATCATTTGACCCTATGGAGGAAGGAAAAAGGCGGTCAATTT
TTGGGTATTATCAAAGAGAGGCGGAGGAGGTGCAGGACCTGCCGTTCTTG
CCAGGAGGTGACCCGGGGGAGGAGGTTGAGCTTCCTGTCTTCAGTCGTGC
GCAATTCGTGAATACGACGTGGACGATTGGGATAGTAGGAGGGGGGGAGG
GGGGGTGGAATCCGTTTAAAAAAGTGCGGAGGACGAGGGTGTTTTTCAGG
GAGGACGGACGAGTGATTTGGGTGAATGGGGGAAACATCGGGGAGTGGAG
TTATGACGCGAAGAGCAACGTGTTTAGGTTTGGAAGGGAGACTTTTTTAA
GTTGGAATGGAAGGAGGAGTTTCCCGACGCTGCTGACGGAGGACCGGTCG
CTTTATTACATGCAGGGCTTTGTGATTGGCTGGGCACCGTTTAAGCCATT
GAGTGTGTATGGGCTTTGGCAGATGTACCGGGATGACGTGAGTGCGGAGG
AGCGAGGGACGGCACCGTGGGAGGAGGAAGATGAGGGGGCGGAGGAGGGG
GAGAACGGGGAGAAGAAGAGGATTGTGAGAGGGTAGATAGGGGTATGGAT
AAATGGGAATAGGAAGAGATGGCAGAAGAAAAATAAATAGAAAGCATTTA
CTCATAAAGGCAGCTTACACACACGCGAGTGAGTGGTCATAAGACGAAGA
GCAGACGAAGAGAAATAAGGAAAAAGGTAAAAAAGGAAAATGTGAGGTGC
back to topCoding sequence (CDS) from alignment at scaffold_7:33959..36908- >mRNA_2833 ID=mRNA_2833|Name=jgi.p|Nanoce1779_2|629136|organism=Nannochloropsis oceanica|type=CDS|length=1725bp|location=Sequence derived from alignment at scaffold_7:33959..36908- (Nannochloropsis oceanica)
ATGTCCCAGGAGCAGCAGCAACAGCGGTGGATGGACGCAGCTTATGGCTC
TTCTGTTTCCAACCAAACCGTCGCAGGAGCAGGGGGAGGGGAAGGAGTGA
TGGACGGGTGGCAAGATGCCTATGGTCGGAGTATGTATGGCTATTATCCC
CCTCCGCCTCCTTACGGATATGACCCATACTACGCTGCTGCTGCTGCTGC
TTCGTGGCAGGAGGAGGAGGAAGGATGGAGCGAGGGCGAGGACGAGGACG
AGGACGAGGAGGAGTGGTGGAGTGATGAGGAGGATGATGGTTATTACAGT
GACGAGGAGGATGAGGAGGATGAGGGCTGGAGGGAGGAGGAGGAAGAGGA
GTGGAGGAGGTCGAAGGCAGGGATGGAAGACGATGTTGAGGAGGAGGGAG
GGAGGGATGGCGGGTTGGATGATCTGATAAGTGAGGCGATTACCTCGGTG
ACGCTTGGGGAGAAGGCCGAGGATGAGGGGGACGAAGGAAGCGAGATAGG
GAAGGAGAAAGGGAAGGAAGGGGAGCAGACACAGTCTATGTCGCAGATGG
GGGAGGAGGTGGCGGTGGAGGAGTCGGAGGGAGTGAAGGAGGAAGAGGAG
GAGGGGGCACTTTCAGTTCGAAAGGAGGGCGAGGAGGAGGGGCAGGAGCA
ACCGCAGCAAGAAGCAGCCAAAGATGAAAGGGATATTCAAGTCGCTGATG
ACAAAGATAAGGATGAGGACGAGAGGGAAGGAGCGGAGGCAGGAAGCAAG
GATGATGAAGAATCCCCTGTGTCTTCCCTTGATTCCTCTGGCGAGGAACT
AAAAGAGAAGGAGGGCGTGGACGAAGACGACAGCAACACTCCCGCCTCAG
TCTCCTTTTCTGCCTCCCTTGCCCGCGCTGCCGGCACGGCCTCTGCTGCC
TTCTCCTCCTCCATGGCCACTGCCCCTCTCCCCTCCTCCGCCTCCCTCCC
TTCCCCCGAAGAACCCAACCCCTTCGAACCCACGACCCCTTCCTCCCCCC
CTTCCTCCCCCCCTTCCTCCTCGGAGACGCCTGAAGCCAAGCCCTGGTGG
TCCTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCAGCGGGGC
CCCCGATCCTTGGTGGAAAATGAAGTATTTGGAGCTGGTGGAGGGCACAT
CATTTGACCCTATGGAGGAAGGAAAAAGGCGGTCAATTTTTGGGTATTAT
CAAAGAGAGGCGGAGGAGGTGCAGGACCTGCCGTTCTTGCCAGGAGGTGA
CCCGGGGGAGGAGGTTGAGCTTCCTGTCTTCAGTCGTGCGCAATTCGTGA
ATACGACGTGGACGATTGGGATAGTAGGAGGGGGGGAGGGGGGGTGGAAT
CCGTTTAAAAAAGTGCGGAGGACGAGGGTGTTTTTCAGGGAGGACGGACG
AGTGATTTGGGTGAATGGGGGAAACATCGGGGAGTGGAGTTATGACGCGA
AGAGCAACGTGTTTAGGTTTGGAAGGGAGACTTTTTTAAGTTGGAATGGA
AGGAGGAGTTTCCCGACGCTGCTGACGGAGGACCGGTCGCTTTATTACAT
GCAGGGCTTTGTGATTGGCTGGGCACCGTTTAAGCCATTGAGTGTGTATG
GGCTTTGGCAGATGTACCGGGATGACGTGAGTGCGGAGGAGCGAGGGACG
GCACCGTGGGAGGAGGAAGATGAGGGGGCGGAGGAGGGGGAGAACGGGGA
GAAGAAGAGGATTGTGAGAGGGTAG back to top
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