Properties
| Property Name | Value |
|---|
| TranscriptId | 583575 |
| Track | FilteredModels2 |
| ProteinId | 583489 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:23747..24666 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2829 ID=mRNA_2829|Name=jgi.p|Nanoce1779_2|583489|organism=Nannochloropsis oceanica|type=mRNA|length=920bp
CCTTGATGTCTTCAGGCTGGATCTCAATTCTCAAAACCCCGACCCGCACC
GGACAAGTGAAAATAGTTGCCAAATTTCCCTCCTCCTCCTCCTCCTCCTC
CACCAAAGGGGGGAGGGCGGGAGGAGGAGGATGGGGAGGAGGGGGGGGGT
GACGTATATTTCGGTCTGGTTGGACTCACCCCAGCTGCTGCACAGTCGCA
TGATTACCTTTTGTGAGTCTATGGGGGCAGGGGGGAGGGAGGGAGGGAGG
GAAGGAGGGAGGGAGGGCTGGAGGAGGAGAGGGAGGAGGCATGCGGAAGC
CAAGGAGGATTCGCGTCCATTGCCCCCTATACATATATAAAAAGCATTAC
TCAAATCAACCAATCAACCAAATCAATCAAACGCATAATCGCACACACTC
GAACGCATAAAACAAGTGATGCGTGTAGCAGGTTGGACGGAGTTTGGATG
TCAATGCGCCCTTTTAGCCATCATTCCTTCGCTCTCTTTTCCTTACTCCC
CCTCCCACAGGCAAAATTTTGGTGTCCAAGAGGCGGTGTCAATGTGCCTC
CATACTCATCACTCCTTCGCTCTCTTTCCCTCACTCACACACCTACAGGC
GAAGCACATGCCAGGAGCCTCAAGCCGGGCGGAGAGTCCTGGATTTTCCA
CCGAGAAATGCCAACCGCCCGACGGGGAGAGTTAGGGGCGACGAAGAATA
AAGACTTGAAGCAGGAGACACAGGAGCCGCAGGAGAGGTCGAGATCGACG
AGGATGGGAGGAAGGGGGAGGAGGAACCATGGGAGAGTTGGTGGGAGAAA
TAACAATTAGACGTGAGCTTCTGTGAAGTGTACAAAGGAGGGAGGGAGGG
AGGGAGGGAGGAAAATGGACGTGTGATAGATGGTATAGTACCTCATTAGA
GGAATGAGGCATCGAAGGAT back to topprotein sequence of jgi.p|Nanoce1779_2|583489 >mRNA_2829-protein ID=mRNA_2829-protein|Name=jgi.p|Nanoce1779_2|583489|organism=Nannochloropsis oceanica|type=polypeptide|length=118bp
MSMRPFSHHSFALFSLLPLPQAKFWCPRGGVNVPPYSSLLRSLSLTHTPT
GEAHARSLKPGGESWIFHREMPTARRGELGATKNKDLKQETQEPQERSRS
TRMGGRGRRNHGRVGGRN back to topmRNA from alignment at scaffold_7:23747..24666- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2829 ID=mRNA_2829|Name=jgi.p|Nanoce1779_2|583489|organism=Nannochloropsis oceanica|type=mRNA|length=920bp|location=Sequence derived from alignment at scaffold_7:23747..24666- (Nannochloropsis oceanica)
CCTTGATGTCTTCAGGCTGGATCTCAATTCTCAAAACCCCGACCCGCACC
GGACAAGTGAAAATAGTTGCCAAATTTCCCTCCTCCTCCTCCTCCTCCTC
CACCAAAGGGGGGAGGGCGGGAGGAGGAGGATGGGGAGGAGGGGGGGGGT
GACGTATATTTCGGTCTGGTTGGACTCACCCCAGCTGCTGCACAGTCGCA
TGATTACCTTTTGTGAGTCTATGGGGGCAGGGGGGAGGGAGGGAGGGAGG
GAAGGAGGGAGGGAGGGCTGGAGGAGGAGAGGGAGGAGGCATGCGGAAGC
CAAGGAGGATTCGCGTCCATTGCCCCCTATACATATATAAAAAGCATTAC
TCAAATCAACCAATCAACCAAATCAATCAAACGCATAATCGCACACACTC
GAACGCATAAAACAAGTGATGCGTGTAGCAGGTTGGACGGAGTTTGGATG
TCAATGCGCCCTTTTAGCCATCATTCCTTCGCTCTCTTTTCCTTACTCCC
CCTCCCACAGGCAAAATTTTGGTGTCCAAGAGGCGGTGTCAATGTGCCTC
CATACTCATCACTCCTTCGCTCTCTTTCCCTCACTCACACACCTACAGGC
GAAGCACATGCCAGGAGCCTCAAGCCGGGCGGAGAGTCCTGGATTTTCCA
CCGAGAAATGCCAACCGCCCGACGGGGAGAGTTAGGGGCGACGAAGAATA
AAGACTTGAAGCAGGAGACACAGGAGCCGCAGGAGAGGTCGAGATCGACG
AGGATGGGAGGAAGGGGGAGGAGGAACCATGGGAGAGTTGGTGGGAGAAA
TAACAATTAGACGTGAGCTTCTGTGAAGTGTACAAAGGAGGGAGGGAGGG
AGGGAGGGAGGAAAATGGACGTGTGATAGATGGTATAGTACCTCATTAGA
GGAATGAGGCATCGAAGGAT back to topCoding sequence (CDS) from alignment at scaffold_7:23747..24666- >mRNA_2829 ID=mRNA_2829|Name=jgi.p|Nanoce1779_2|583489|organism=Nannochloropsis oceanica|type=CDS|length=356bp|location=Sequence derived from alignment at scaffold_7:23747..24666- (Nannochloropsis oceanica)
ATGTCAATGCGCCCTTTTAGCCATCATTCCTTCGCTCTCTTTTCCTTACT
CCCCCTCCCACAGGCAAAATTTTGGTGTCCAAGAGGCGGTGTCAATGTGC
CTCCATACTCATCACTCCTTCGCTCTCTTTCCCTCACTCACACACCTACA
GGCGAAGCACATGCCAGGAGCCTCAAGCCGGGCGGAGAGTCCTGGATTTT
CCACCGAGAAATGCCAACCGCCCGACGGGGAGAGTTAGGGGCGACGAAGA
ATAAAGACTTGAAGCAGGAGACACAGGAGCCGCAGGAGAGGTCGAGATCG
ACGAGGATGGGAGGAAGGGGGAGGAGGAACCATGGGAGAGTTGGTGGGAG
AAATAA back to top
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