Properties
| Property Name | Value |
|---|
| TranscriptId | 340819 |
| Track | FilteredModels2 |
| ProteinId | 340733 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1245582..1246922 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2805 ID=mRNA_2805|Name=jgi.p|Nanoce1779_2|340733|organism=Nannochloropsis oceanica|type=mRNA|length=665bp
TCTTTTCGACCTCCCCTACTCCCTCATATACACCATCAAACAGATATCAA
GACCCATCATCACCACGCGACGCCTCACATACATTTCGTGCATGCATATA
CCCCCCCACAGGCGTAGGGGAAGCTATCAGCGCCAAAGCTGGGGGCAGCA
GCACCAGTAGCAGCAGCATCACCACCAGAGCAATGGCAACGACGGGAGGA
GGGTCTACGGCAGGAGGAGGAGGAGGAGGCGGCGGAGGGGGAGAGGGTGT
GATCCTGCTGAGAGACGAGTTTTTATCGTTATGCCTTAACCATGCCGAGG
GACTGCGCGACGAGCAACTACGAAAACATTTTGCTGAGCGATACTTGCAG
CTGGTGCCGATCATTAACAGTTGTCTTGCCGAGAACCGCATCCGCTGCAT
GAAGACAGAGCGGAACGAATTGGTCTACCAAGCCATGGACCCCAACCTGG
CCGAGAAGATGAAAAACCTAGGCGCGGAGCAGCTGTTGGTGTATCAGGTG
GTGGAAAAGGCGGGCAACAAGGGGATCTGGCACAAAGACATCCGGTCCCA
GACGTCGTTACAACAGCCCTGAAGAAGATTCTGAAGAATTTGGAGTCGCG
GCAGCTGATCAAGAGCACCTCGTCCATCAGCAGCAAGACTCGGAAGCTCT
ACCTCCTTTTCGACC back to topprotein sequence of jgi.p|Nanoce1779_2|340733 >mRNA_2805-protein ID=mRNA_2805-protein|Name=jgi.p|Nanoce1779_2|340733|organism=Nannochloropsis oceanica|type=polypeptide|length=130bp
MATTGGGSTAGGGGGGGGGGEGVILLRDEFLSLCLNHAEGLRDEQLRKHF
AERYLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQ
LLVYQVVEKAGNKGIWHKDIRSQTSLQQP* back to topmRNA from alignment at scaffold_5:1245582..1246922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2805 ID=mRNA_2805|Name=jgi.p|Nanoce1779_2|340733|organism=Nannochloropsis oceanica|type=mRNA|length=1341bp|location=Sequence derived from alignment at scaffold_5:1245582..1246922+ (Nannochloropsis oceanica)
TCTTTTCGACCTCCCCTACTCCCTCATATACACCATCAAACAGATATCAA
GACCCATCATCACCACGCGACGCCTCACATACATTTCGTGCATGCATATA
CCCCCCCACAGGCGTAGGGGAAGCTATCAGCGCCAAAGCTGGGGGCAGCA
GCACCAGTAGCAGCAGCATCACCACCAGAGCAATGGCAACGACGGGAGGA
GGGTCTACGGCAGGAGGAGGAGGAGGAGGCGGCGGAGGGGGAGAGGGTGT
GATCCTGCTGAGAGACGAGTTTTTATCGTTATGCCTTAACCATGCCGAGG
TAAGAAGGCGGAGGTAGGGAGGGGTAGGGTGTGTGTGCGCTTGTTTCTAC
AGCTTGGCTCTAGCGTTCACCCCCCTTCCTGTCCCTCCCTCCTTCCCAAT
CTCCTGTGCTCCACTACCCACCAGGGACTGCGCGACGAGCAACTACGAAA
ACATTTTGCTGAGCGATACTTGCAGCTGGTGCCGATCATTAACAGTTGTC
TTGCCGAGGTAAGGAGGCAGGAGGAAAGAAGATAAGGGATAGGGATAGTG
GTGAGGTAGGCAGGAGAGGTAGAGCTTGCATGGTGTTGAAGGGCTTGCCA
GTCAAGTTCGAAGGAGTTGCAAAAAGAGGTAAACGGCCCTCCTCATACAC
TCAAACCCACTCGTTTGGCTTTCTCTCCCCCCCCCCCCCCAGAACCGCAT
CCGCTGCATGAAGACAGAGCGGAACGAATTGGTCTACCAAGCCATGGACC
CCAACCTGGCCGAGAAGATGAAAAACCTAGGGTAAGCGGATCCCGGAGGG
AGGGAAGGATGGCAAAAGCAAGATCCTAGCGTCTTCCTCGACGGCCATGT
CACTGGCTTGTTGTCTCACCGTCCGCCCGCCCCTCATTTCCTCCCTCTCT
TCCTTCCCCTCCCCCCCTTCATCCTTCGTCTCCATTCCTTAGCGCGGAGC
AGCTGTTGGTGTATCAGGTGGTGGAAAAGGCGGGCAACAAGGGGATCTGG
CACAAAGACATCCGGTCCCAGACGTCGTTACAACAGCCGGTGAGAAAGAC
AGGCAGGGAGGCAGGGAGGGAGGAGGCAGGGAGAGAGGGAGGGAGGGTGA
GGGTGAGAGGGTAGGGGAGTGTAGTTAGGCAGGTGGGCAAAGATGGCATC
ATTTCTTTTTTTCTCGTCCCGTACATTTATCCCGCTATCTCCAATGTTCT
CTCTTTCCCTCCCTGTCTTCCTTCCTCCCTCCTCGCCACAGGCCCTGAAG
AAGATTCTGAAGAATTTGGAGTCGCGGCAGCTGATCAAGAGCACCTCGTC
CATCAGCAGCAAGACTCGGAAGCTCTACCTCCTTTTCGACC back to topCoding sequence (CDS) from alignment at scaffold_5:1245582..1246922+ >mRNA_2805 ID=mRNA_2805|Name=jgi.p|Nanoce1779_2|340733|organism=Nannochloropsis oceanica|type=CDS|length=1950bp|location=Sequence derived from alignment at scaffold_5:1245582..1246922+ (Nannochloropsis oceanica)
ATGGCAACGACGGGAGGAGGGTCTACGGCAGGAGGAGGAGGAGGAGGCGG
CGGAGGGGGAGAGGGTGTGATCCTGCTGAGAGACGAGTTTTTATCGTTAT
GCCTTAACCATGCCGAGGGACTGCGCGACGAGCAACTACGAAAACATTTT
GCTGAGCGATACTTGCAGCTGGTGCCGATCATTAACAGTTGTCTTGCCGA
GAACCGCATCCGCTGCATGAAGACAGAGCGGAACGAATTGGTCTACCAAG
CCATGGACCCCAACCTGGCCGAGAAGATGAAAAACCTAGGCGCGGAGCAG
CTGTTGGTGTATCAGGTGGTGGAAAAGGCGGGCAACAAGGGGATCTGGCA
CAAAGACATCCGGTCCCAGACGTCGTTACAACAGCCCTGAATGGCAACGA
CGGGAGGAGGGTCTACGGCAGGAGGAGGAGGAGGAGGCGGCGGAGGGGGA
GAGGGTGTGATCCTGCTGAGAGACGAGTTTTTATCGTTATGCCTTAACCA
TGCCGAGGGACTGCGCGACGAGCAACTACGAAAACATTTTGCTGAGCGAT
ACTTGCAGCTGGTGCCGATCATTAACAGTTGTCTTGCCGAGAACCGCATC
CGCTGCATGAAGACAGAGCGGAACGAATTGGTCTACCAAGCCATGGACCC
CAACCTGGCCGAGAAGATGAAAAACCTAGGCGCGGAGCAGCTGTTGGTGT
ATCAGGTGGTGGAAAAGGCGGGCAACAAGGGGATCTGGCACAAAGACATC
CGGTCCCAGACGTCGTTACAACAGCCCTGAATGGCAACGACGGGAGGAGG
GTCTACGGCAGGAGGAGGAGGAGGAGGCGGCGGAGGGGGAGAGGGTGTGA
TCCTGCTGAGAGACGAGTTTTTATCGTTATGCCTTAACCATGCCGAGGGA
CTGCGCGACGAGCAACTACGAAAACATTTTGCTGAGCGATACTTGCAGCT
GGTGCCGATCATTAACAGTTGTCTTGCCGAGAACCGCATCCGCTGCATGA
AGACAGAGCGGAACGAATTGGTCTACCAAGCCATGGACCCCAACCTGGCC
GAGAAGATGAAAAACCTAGGCGCGGAGCAGCTGTTGGTGTATCAGGTGGT
GGAAAAGGCGGGCAACAAGGGGATCTGGCACAAAGACATCCGGTCCCAGA
CGTCGTTACAACAGCCCTGAATGGCAACGACGGGAGGAGGGTCTACGGCA
GGAGGAGGAGGAGGAGGCGGCGGAGGGGGAGAGGGTGTGATCCTGCTGAG
AGACGAGTTTTTATCGTTATGCCTTAACCATGCCGAGGGACTGCGCGACG
AGCAACTACGAAAACATTTTGCTGAGCGATACTTGCAGCTGGTGCCGATC
ATTAACAGTTGTCTTGCCGAGAACCGCATCCGCTGCATGAAGACAGAGCG
GAACGAATTGGTCTACCAAGCCATGGACCCCAACCTGGCCGAGAAGATGA
AAAACCTAGGCGCGGAGCAGCTGTTGGTGTATCAGGTGGTGGAAAAGGCG
GGCAACAAGGGGATCTGGCACAAAGACATCCGGTCCCAGACGTCGTTACA
ACAGCCCTGAATGGCAACGACGGGAGGAGGGTCTACGGCAGGAGGAGGAG
GAGGAGGCGGCGGAGGGGGAGAGGGTGTGATCCTGCTGAGAGACGAGTTT
TTATCGTTATGCCTTAACCATGCCGAGGGACTGCGCGACGAGCAACTACG
AAAACATTTTGCTGAGCGATACTTGCAGCTGGTGCCGATCATTAACAGTT
GTCTTGCCGAGAACCGCATCCGCTGCATGAAGACAGAGCGGAACGAATTG
GTCTACCAAGCCATGGACCCCAACCTGGCCGAGAAGATGAAAAACCTAGG
CGCGGAGCAGCTGTTGGTGTATCAGGTGGTGGAAAAGGCGGGCAACAAGG
GGATCTGGCACAAAGACATCCGGTCCCAGACGTCGTTACAACAGCCCTGA back to top
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