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Properties
| Property Name | Value |
|---|
| TranscriptId | 339807 |
| Track | FilteredModels2 |
| ProteinId | 339721 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1189891..1191305 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2787 ID=mRNA_2787|Name=jgi.p|Nanoce1779_2|339721|organism=Nannochloropsis oceanica|type=mRNA|length=866bp
TTGTTAATAGTGCCAGCACCAAGGCCTGTTTGCGTAATATACACACATAC
TACTTAGAAAGGCGGCACGTAAGGAGGCTCAACAAGCTTTGTGGACCCCC
GCCCAGCAGCCAGCAGCCAGTCTAGCATGTCTCCCTAGGCCCAGTCTTGT
GCGCAGCACCACACTCAATACCACCCACCACCACCCCATCGTAGAGGTTT
GTCACGTCGCACCCTCTACATGGTCCTGGCGTCTGTGGCTGGCGTCTGTG
TGGGGGACAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCA
CGGAGAGGGAGCACGCTTCCCGGGCCAGGAAAGGGACGCGTGCTGCGGGG
GGGCTTCTCCTCGACAGTCCACACGGGTCCGGGCACGAGCAGTGGAGAGG
AGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGGTGCTA
GGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAGACTGA
GATCAGGCACATCGAGAGCAAGGCGGCGGCGGAGATCGCGCGTGTGGAGG
ACAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTG
GAGGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCG
GTTCAAGCGCGAGATCCAACTGGCTTACACTCAAGACTATGAGCCTTATC
AGGCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATTG
GAGGAGAAGGAAGAATAGAATTAGGATTCGGGGCCCTACCTTAATATAAA
TAGAAACCATGTAGAAAGACACATTCAAAGACATGTACAGTGGACGGGGT
TGTGCAGTAGAGAGAT back to topprotein sequence of jgi.p|Nanoce1779_2|339721 >mRNA_2787-protein ID=mRNA_2787-protein|Name=jgi.p|Nanoce1779_2|339721|organism=Nannochloropsis oceanica|type=polypeptide|length=183bp
MVLASVAGVCVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTV
HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIES
KAAAEIARVEDKAAAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREIQ
LAYTQDYEPYQAALVDKRKKRGGTGGLEEKEE* back to topmRNA from alignment at scaffold_5:1189891..1191305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2787 ID=mRNA_2787|Name=jgi.p|Nanoce1779_2|339721|organism=Nannochloropsis oceanica|type=mRNA|length=1415bp|location=Sequence derived from alignment at scaffold_5:1189891..1191305- (Nannochloropsis oceanica)
TTGTTAATAGTGCCAGCACCAAGGCCTGTTTGCGTAATATACACACATAC
TACTTAGAAAGGCGGCACGTAAGGAGGCTCAACAAGCTTTGTGGACCCCC
GCCCAGCAGCCAGCAGCCAGTCTAGCATGTCTCCCTAGGCCCAGTCTTGT
GCGCAGCACCACACTCAATACCACCCACCACCACCCCATCGTAGAGGTTT
GTCACGTCGCACCCTCTACATGGTCCTGGCGTCTGTGGCTGGCGTCTGTG
TGGTGGGTGTGCTCTGTGTGTGCCTTCCATGCATCATCATCATCATCAAG
CAAGCCTCTTCTTGTCCCCCATCCCCTTTTGGTCTTGCCCTTTGGCAAGC
CAGGGGCACCCGCACCGCCACCAACCTGTGGTCTAGGATGCGGAGGGGGA
GGGTTTGACGCTGACGGCGTAACGAGTTTGGTTCTGAAGAGCTTGTTAGT
TGTATTTAGGGCGGCTTGGAAACCGACCTCAAACACTGCCTCATTCCCCT
TCCCTCCCTCCCACCACTACACCACAACAACATGCACCGCTTGCATGCTT
GCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGACAACAT
GCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAGGGAGCA
CGCTTCCCGGGCCAGGTGAGGTGGCGTGTGTGATGCATTTAGGAAGAACT
CGGGCTTGTTGATGGGGTGGGAGTGCGCGTTCAGTGCACGCGACCGCAGT
CTGGCCGAGGCATGTTGATCCCCCCTTTGTCTGCGTGTCTGTGTCGTTTG
CGTTGCAATCTTTGTTATGCGGACAAGGGCCCGCGTCAAGGTGTTCACGC
ACACGCACATCCATACACACCCAACAGGAAAGGGACGCGTGCTGCGGGGG
GGCTTCTCCTCGACAGTCCACACGGGTCCGGGCACGAGCAGTGGAGAGGA
GCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGGTGCTAG
GGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAGACTGAG
ATCAGGCACATCGAGAGCAAGGCGGCGGCGGAGATCGCGCGTGTGGAGGA
CAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGG
AGGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGG
TTCAAGCGCGAGATCCAACTGGCTTACACTCAAGACTATGAGCCTTATCA
GGCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGG
AGGAGAAGGAAGAATAGAATTAGGATTCGGGGCCCTACCTTAATATAAAT
AGAAACCATGTAGAAAGACACATTCAAAGACATGTACAGTGGACGGGGTT
GTGCAGTAGAGAGAT back to topCoding sequence (CDS) from alignment at scaffold_5:1189891..1191305- >mRNA_2787 ID=mRNA_2787|Name=jgi.p|Nanoce1779_2|339721|organism=Nannochloropsis oceanica|type=CDS|length=1647bp|location=Sequence derived from alignment at scaffold_5:1189891..1191305- (Nannochloropsis oceanica)
GAAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGT
CCGGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTT
CCAGGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCG
TGCGTACTTTCGACCAGACTGAGATCAGGCACATCGAGAGCAAGGCGGCG
GCGGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGC
GAAAGCGGAGATCGCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGT
TTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGATCCAACTGGCTTAC
ACTCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAA
GAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAATAGGGGGACAACA
TGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAGGGAGC
ACGCTTCCCGGGCCAGATGGTCCTGGCGTCTGTGGCTGGCGTCTGTGTGG
AAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGTC
CGGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTC
CAGGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGT
GCGTACTTTCGACCAGACTGAGATCAGGCACATCGAGAGCAAGGCGGCGG
CGGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCG
AAAGCGGAGATCGCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGTT
TTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGATCCAACTGGCTTACA
CTCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAG
AGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAATAGGGGGACAACAT
GCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAGGGAGCA
CGCTTCCCGGGCCAGATGGTCCTGGCGTCTGTGGCTGGCGTCTGTGTGGA
AAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGTCC
GGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCC
AGGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTG
CGTACTTTCGACCAGACTGAGATCAGGCACATCGAGAGCAAGGCGGCGGC
GGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCGA
AAGCGGAGATCGCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGTTT
TGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGATCCAACTGGCTTACAC
TCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGA
GGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAATAGGGGGACAACATG
CTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAGGGAGCAC
GCTTCCCGGGCCAGATGGTCCTGGCGTCTGTGGCTGGCGTCTGTGTG back to top
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