Properties
| Property Name | Value |
|---|
| TranscriptId | 628840 |
| Track | FilteredModels2 |
| ProteinId | 628754 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1177176..1178535 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2783 ID=mRNA_2783|Name=jgi.p|Nanoce1779_2|628754|organism=Nannochloropsis oceanica|type=mRNA|length=1149bp
CCGACCTCAAACACTGCCTCATTCCCCTTCCCTCCCTCCCACCACTACAC
CACAACAACATGCACCGCTTGCATGCTTGCCTCGCTGCTTGCTGCCATCA
TCAACCACGACCACCAGGGGGACAACATGCTTCGGCGCTTCACGGCGAAG
GCTGGGGCCATGGCACGGAGAGGGAGCACGCTTCCCGGGCCAGGAAAGGG
ACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCA
CGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAAGGC
ATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTAC
TTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGG
CGGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGAC
AAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGACGTCGCGCGTGTGGA
GGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGT
TCAAGCGCGAGGTCCAACTGGCTTACACTCAAGACTATGAGCCTTATCAG
GCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGA
GGAGAAGGAAGAGGAGAATTAGGATTCGGGGCCCTACCTTAATATAAATA
GAAACCATGTAGAAAGACACATTCAAAGACATGTACAGTGGACGGGGTTG
TGCAGGAGAGAGATGGACAGGAGGGGGATAGGACTCATATACGAGAAACG
TAATAACGAGGGCTCCCCACAACTTGTATCGAGCGAGTTTTTCCTTTGTC
TTTTATGATTTGATGCACTGGCTCATATCCATCTCCCCCACACTAACGCC
GCCGACCCTGCTTTCGACTTGTCCAACCAAGCCCCTGCCGCTTGACGGCA
GCAGACCGAGGCGACCCGTCGAAGGAAGGGGCAGACGCGGTGGGAAGGAG
GGAGGAAGTCATGGTATGAGTCAATGGATTGTAGCGGAAGCTTTGGACCC
CGGAAGAAAGGCACGGAGGGGCGTGCTAGAGGCGGTGTTGTGTTGTTAAT
AGTGCCAGCACCAAGGCCTGTTTGCGTAATATACACACATACTACTTAG back to topprotein sequence of jgi.p|Nanoce1779_2|628754 >mRNA_2783-protein ID=mRNA_2783-protein|Name=jgi.p|Nanoce1779_2|628754|organism=Nannochloropsis oceanica|type=polypeptide|length=200bp
MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIARVEDKAAAEIAQAKADVARVEDKRTMSE
VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN* back to topmRNA from alignment at scaffold_5:1177176..1178535- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2783 ID=mRNA_2783|Name=jgi.p|Nanoce1779_2|628754|organism=Nannochloropsis oceanica|type=mRNA|length=1360bp|location=Sequence derived from alignment at scaffold_5:1177176..1178535- (Nannochloropsis oceanica)
CCGACCTCAAACACTGCCTCATTCCCCTTCCCTCCCTCCCACCACTACAC
CACAACAACATGCACCGCTTGCATGCTTGCCTCGCTGCTTGCTGCCATCA
TCAACCACGACCACCAGGGGGACAACATGCTTCGGCGCTTCACGGCGAAG
GCTGGGGCCATGGCACGGAGAGGGAGCACGCTTCCCGGGCCAGGTGAGGT
GGCGTGTGTGATGCATTTAGGAAGAACTCGGGCTTGTTGATGGGGTGGGA
GTGCGCGTTCAGTGCACGCGACCGCAGTCTGGCCGAGGCATGTTGATTCC
CCCTTTGTCTGCGTGTCTGTGTCGTTTGCGTTGCAATCTTTGTTATGCGG
AAAAGGCCCGCATCAAGGTGTTCACGCACACGCACATCCATACACACCCA
ACAGGAAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACAC
GGGGCCAGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAA
TCTTCCAAGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTG
GTCGTGCGTACTTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGT
CCAGAGCAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGC
GTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGACGTC
GCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGA
GGTGGAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACACTCAAGACTATG
AGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACC
GGCGGATTGGAGGAGAAGGAAGAGGAGAATTAGGATTCGGGGCCCTACCT
TAATATAAATAGAAACCATGTAGAAAGACACATTCAAAGACATGTACAGT
GGACGGGGTTGTGCAGGAGAGAGATGGACAGGAGGGGGATAGGACTCATA
TACGAGAAACGTAATAACGAGGGCTCCCCACAACTTGTATCGAGCGAGTT
TTTCCTTTGTCTTTTATGATTTGATGCACTGGCTCATATCCATCTCCCCC
ACACTAACGCCGCCGACCCTGCTTTCGACTTGTCCAACCAAGCCCCTGCC
GCTTGACGGCAGCAGACCGAGGCGACCCGTCGAAGGAAGGGGCAGACGCG
GTGGGAAGGAGGGAGGAAGTCATGGTATGAGTCAATGGATTGTAGCGGAA
GCTTTGGACCCCGGAAGAAAGGCACGGAGGGGCGTGCTAGAGGCGGTGTT
GTGTTGTTAATAGTGCCAGCACCAAGGCCTGTTTGCGTAATATACACACA
TACTACTTAG back to topCoding sequence (CDS) from alignment at scaffold_5:1177176..1178535- >mRNA_2783 ID=mRNA_2783|Name=jgi.p|Nanoce1779_2|628754|organism=Nannochloropsis oceanica|type=CDS|length=1200bp|location=Sequence derived from alignment at scaffold_5:1177176..1178535- (Nannochloropsis oceanica)
GAAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGG
CCAGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTT
CCAAGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCG
TGCGTACTTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGTCCAG
AGCAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGT
GGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGACGTCGCGC
GTGTGGAGGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTG
GAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACACTCAAGACTATGAGCC
TTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCG
GATTGGAGGAGAAGGAAGAGGAGAATTAGATGCTTGCCTCGCTGCTTGCT
GCCATCATCAACCACGACCACCAGGGGGACAACATGCTTCGGCGCTTCAC
GGCGAAGGCTGGGGCCATGGCACGGAGAGGGAGCACGCTTCCCGGGCCAG
GAAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGG
CCAGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTT
CCAAGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCG
TGCGTACTTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGTCCAG
AGCAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGT
GGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCGAAAGCGGACGTCGCGC
GTGTGGAGGACAAGCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTG
GAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACACTCAAGACTATGAGCC
TTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCG
GATTGGAGGAGAAGGAAGAGGAGAATTAGATGCTTGCCTCGCTGCTTGCT
GCCATCATCAACCACGACCACCAGGGGGACAACATGCTTCGGCGCTTCAC
GGCGAAGGCTGGGGCCATGGCACGGAGAGGGAGCACGCTTCCCGGGCCAG back to top
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