Properties
| Property Name | Value |
|---|
| TranscriptId | 628839 |
| Track | FilteredModels2 |
| ProteinId | 628753 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_5 | supercontig | scaffold_5:1175365..1176757 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2782 ID=mRNA_2782|Name=jgi.p|Nanoce1779_2|628753|organism=Nannochloropsis oceanica|type=mRNA|length=1182bp
CCGACCTCAAACACTGCCTCATTCCCCTTCCCTCCCTCCCACCACTACAC
CACAACAATATGCACCGCTTGCATGCTTGCCTTGCTGCTTGCTGCCATCA
TCAACCACGACCACCAGGGGGACAACATGCTTCGGCGCTTCACGGCGAAG
GCTGGGGCCATGGCACGGAGTGGGAGCACGCTTCCCGGGCCAGGAAAGGG
ACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCA
CGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGC
ATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTAC
TTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGG
CGGCGGCGGAGTTGAGGAGCATCGAGAGCAAGGCGGCGGCGGAGATCGCG
CAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGAT
CGCGCAGGCGAAAGCGGACGTCGCGCGTGTGGAGGACAAGCGGACAATGT
CGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTCCAA
CTGGCTTACACTCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAA
ACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGGAGA
ATTAGGATTCGGGGTCCTACCTTAATATAAATAGAAACCATGTAGAAAGA
CACATTCAAAGACATGTACAGTGGACGGGGTTGTGCAGGAGAGAGATGGA
CAGGAGGGGGATAGGACTCATATACGAGAAACGTAATAACGAGGGCTCCC
CACAACTTGTATCGAGCGAGTTTTTCCTTTGTCTTTTATGATTTGATGCA
CTGGCTCATATCCATCTCCCCCACACTAACGCCGCCGACCCTGCTTTCGA
CTTGTCCAACCAAGCCCCTGCCGCTTGACGGCAGCAGACCGAGGCGACCC
GTCGAAGGAAGGGGCAGACGCGGTGGGAAGGAGGGAGGAAGTCATGGTAT
GAGTCAATGGATTGTAGCGGAAGCTTTGGACCCCGGAAGAAAGGCACGGA
GGGGCGTGCTAGAGGCGGTGTGGTGTTGTTAATAGTGCCAGCACCAAGGC
CTGTTTGCGTAATATACACACATACTACTTAG back to topprotein sequence of jgi.p|Nanoce1779_2|628753 >mRNA_2782-protein ID=mRNA_2782-protein|Name=jgi.p|Nanoce1779_2|628753|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MLALLLAAIINHDHQGDNMLRRFTAKAGAMARSGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAELRSIESKAAAEIAQAKAEIARVEDKAAAEIAQAKADV
ARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGT
GGLEEKEEEN* back to topmRNA from alignment at scaffold_5:1175365..1176757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2782 ID=mRNA_2782|Name=jgi.p|Nanoce1779_2|628753|organism=Nannochloropsis oceanica|type=mRNA|length=1393bp|location=Sequence derived from alignment at scaffold_5:1175365..1176757- (Nannochloropsis oceanica)
CCGACCTCAAACACTGCCTCATTCCCCTTCCCTCCCTCCCACCACTACAC
CACAACAATATGCACCGCTTGCATGCTTGCCTTGCTGCTTGCTGCCATCA
TCAACCACGACCACCAGGGGGACAACATGCTTCGGCGCTTCACGGCGAAG
GCTGGGGCCATGGCACGGAGTGGGAGCACGCTTCCCGGGCCAGGTGAGGT
GGCGTGTGTGATGCATTTTGGAAGAACTCGGGCTTGTTGATGGGGTGGGA
GTGCGCGTTCAGTGCACGCGACCGCAGTCTGGCCGAGGCATGTTGATCCC
CCCTTTGTCTGCGTGTCTGTGTCGTTTGCGTTGCAATCTTTGTTATGCGG
ACAAGGCCCGCATCAAGGTGTTCACGCACACGCACATCCATACACACCCA
ACAGGAAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACAC
GGGGCCAGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAA
TCTTCCAGGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTG
GTCGTGCGTACTTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGT
CCAGAGCAAGGCGGCGGCGGAGTTGAGGAGCATCGAGAGCAAGGCGGCGG
CGGAGATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACAAGGCG
GCGGCGGAGATCGCGCAGGCGAAAGCGGACGTCGCGCGTGTGGAGGACAA
GCGGACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGC
GCGAGGTCCAACTGGCTTACACTCAAGACTATGAGCCTTATCAGGCCGCG
CTTGTGGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAA
GGAAGAGGAGAATTAGGATTCGGGGTCCTACCTTAATATAAATAGAAACC
ATGTAGAAAGACACATTCAAAGACATGTACAGTGGACGGGGTTGTGCAGG
AGAGAGATGGACAGGAGGGGGATAGGACTCATATACGAGAAACGTAATAA
CGAGGGCTCCCCACAACTTGTATCGAGCGAGTTTTTCCTTTGTCTTTTAT
GATTTGATGCACTGGCTCATATCCATCTCCCCCACACTAACGCCGCCGAC
CCTGCTTTCGACTTGTCCAACCAAGCCCCTGCCGCTTGACGGCAGCAGAC
CGAGGCGACCCGTCGAAGGAAGGGGCAGACGCGGTGGGAAGGAGGGAGGA
AGTCATGGTATGAGTCAATGGATTGTAGCGGAAGCTTTGGACCCCGGAAG
AAAGGCACGGAGGGGCGTGCTAGAGGCGGTGTGGTGTTGTTAATAGTGCC
AGCACCAAGGCCTGTTTGCGTAATATACACACATACTACTTAG back to topCoding sequence (CDS) from alignment at scaffold_5:1175365..1176757- >mRNA_2782 ID=mRNA_2782|Name=jgi.p|Nanoce1779_2|628753|organism=Nannochloropsis oceanica|type=CDS|length=1266bp|location=Sequence derived from alignment at scaffold_5:1175365..1176757- (Nannochloropsis oceanica)
GAAAGGGACGCGTGCTGCGGGGGGGCTTCTCCTCGACAGTCCACACGGGG
CCAGGCACGAGCAGTGGAGAGGAGCTCGGTAAGAAGTGGGCGACAATCTT
CCAGGGCATTGGCGCGGTGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCG
TGCGTACTTTCGACCAGACTGAGATGGCGACGGAGATAAAGTATGTCCAG
AGCAAGGCGGCGGCGGAGTTGAGGAGCATCGAGAGCAAGGCGGCGGCGGA
GATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACAAGGCGGCGG
CGGAGATCGCGCAGGCGAAAGCGGACGTCGCGCGTGTGGAGGACAAGCGG
ACAATGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGA
GGTCCAACTGGCTTACACTCAAGACTATGAGCCTTATCAGGCCGCGCTTG
TGGACAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAA
GAGGAGAATTAGATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGA
CCACCAGGGGGACAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCA
TGGCACGGAGTGGGAGCACGCTTCCCGGGCCAGGAAAGGGACGCGTGCTG
CGGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGA
GTTGAGGAGCATCGAGAGCAAGGCGGCGGCGGAGATCGCGCAGGCGAAAG
CGGAGATCGCGCGTGTGGAGGACAAGGCGGCGGCGGAGATCGCGCAGGCG
AAAGCGGACGTCGCGCGTGTGGAGGACAAGCGGACAATGTCGGAAGTGTT
TTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACA
CTCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAG
AGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGGAGAATTAGATGCT
TGCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGACAACA
TGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGTGGGAGC
ACGCTTCCCGGGCCAG back to top
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